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The map label for this gene is deoR [H]

Identifier: 152969166

GI number: 152969166

Start: 672038

End: 673030

Strand: Direct

Name: deoR [H]

Synonym: KPN_00595

Alternate gene names: 152969166

Gene position: 672038-673030 (Clockwise)

Preceding gene: 152969161

Following gene: 152969174

Centisome position: 12.64

GC content: 56.8

Gene sequence:

>993_bases
ATGATGCATAAAAATAACGAGCAGAAAACAGAGGGGAATGCCATGTCGAAGCAGGATGAACAGCGGTTGCTGGTGAAGAT
CGCCACGCTTTACTACAGCGAGAATAAAAAGCAGTCCGAGATCGCCTCGCTGCTGCATCTGTCCCAGTCTTTTGTTTCAC
GGGCGCTTACCCGCTGTCAGAAAGAGGGGCTGGTGAAAATTACCGTGGTCCAGCCGACAAACATTTTTGTCGATCTGGAA
AAGGCGATTGAGGAGCGTTTTGGCATTCGACAGGCGATAGTCGTGGATGTGGGCGAGAACGCCAGTTACAGTCAGGTAAA
GCATGCCATCGGCAGCGCAGCGGCGCACTATGTCGAAACGCGGCTGCGGCCGGAAGACCTCGTGGGGATCTCGTCCTGGA
GCAGTACGATCCGCTGCATGGTGGATGAGATGCATCCGCAGAACATTCGCGCCGCCGGGGTGATTCAGCTGTTGGGCGGC
GTCGGTCCCAACGGCAACGTGCAGGCTACCATTTTAACCCAGCAGCTGGCGGCTCATTTAGGCTGCCCGGCTTGGCTGTT
GCCGTCGCAGAGTATTGAGCACTCCGTGGAGGAGCGCAGCCGTCTGGTAAACAGTCCGGACGTCGCGGCGGTGGTGGCGA
AATTTGCCGAAGTGGATGTGGCCATCGTCGGTATAGGTGAACTGGAGCCTTCGCAGCTGCTGAAAAATTCCGGTAACTAT
TATAATGAAACCATGCTCCAGCTGCTGGCGGCGCGCGGCGCGGTGGGGGATATCTGCCTGCATTACTATAATGCGGCGGG
CAAACCGGTACTGAGCCAGGATGAGGATCCGGTGATCGGTATGGAGCTTGATCAAATTCGTCGTTGTCCGCAGGTGATTG
CGCTGGCTGGCGGCGTGGACAAAGAGAACGCCATCCGCGGCGCGTTGCAGGGCGACTATATTGATGTCCTGATCACCGAC
TTCCCGACCGCGCGCGCGTTAATTAAGGGCTAA

Upstream 100 bases:

>100_bases
CGGGGTTTGTCCACGATTTGTACGGCCTATTTTCTAAAAAAGGAGAAAACGATCACATTTGGATCGTCGGGAAAAGGGCG
CTGCGCTTGTTATCTATTCA

Downstream 100 bases:

>100_bases
GCGGGGGGAGACTGGCGTGCCTGGCGCGCCAGCGTCGCCAGTTCGTCCGCGCTGAGGCGAGTCATCCGCAATACGGTTTC
AGTGTCCATGCCGTTCTCTA

Product: putative sugar-binding region

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MMHKNNEQKTEGNAMSKQDEQRLLVKIATLYYSENKKQSEIASLLHLSQSFVSRALTRCQKEGLVKITVVQPTNIFVDLE
KAIEERFGIRQAIVVDVGENASYSQVKHAIGSAAAHYVETRLRPEDLVGISSWSSTIRCMVDEMHPQNIRAAGVIQLLGG
VGPNGNVQATILTQQLAAHLGCPAWLLPSQSIEHSVEERSRLVNSPDVAAVVAKFAEVDVAIVGIGELEPSQLLKNSGNY
YNETMLQLLAARGAVGDICLHYYNAAGKPVLSQDEDPVIGMELDQIRRCPQVIALAGGVDKENAIRGALQGDYIDVLITD
FPTARALIKG

Sequences:

>Translated_330_residues
MMHKNNEQKTEGNAMSKQDEQRLLVKIATLYYSENKKQSEIASLLHLSQSFVSRALTRCQKEGLVKITVVQPTNIFVDLE
KAIEERFGIRQAIVVDVGENASYSQVKHAIGSAAAHYVETRLRPEDLVGISSWSSTIRCMVDEMHPQNIRAAGVIQLLGG
VGPNGNVQATILTQQLAAHLGCPAWLLPSQSIEHSVEERSRLVNSPDVAAVVAKFAEVDVAIVGIGELEPSQLLKNSGNY
YNETMLQLLAARGAVGDICLHYYNAAGKPVLSQDEDPVIGMELDQIRRCPQVIALAGGVDKENAIRGALQGDYIDVLITD
FPTARALIKG
>Mature_330_residues
MMHKNNEQKTEGNAMSKQDEQRLLVKIATLYYSENKKQSEIASLLHLSQSFVSRALTRCQKEGLVKITVVQPTNIFVDLE
KAIEERFGIRQAIVVDVGENASYSQVKHAIGSAAAHYVETRLRPEDLVGISSWSSTIRCMVDEMHPQNIRAAGVIQLLGG
VGPNGNVQATILTQQLAAHLGCPAWLLPSQSIEHSVEERSRLVNSPDVAAVVAKFAEVDVAIVGIGELEPSQLLKNSGNY
YNETMLQLLAARGAVGDICLHYYNAAGKPVLSQDEDPVIGMELDQIRRCPQVIALAGGVDKENAIRGALQGDYIDVLITD
FPTARALIKG

Specific function: Negative regulator of the dra-nupC-pdp operon. DeoR binds cooperatively to the operator DNA, which consists of a palindrome and a direct repeat sequence located 3' to the palindrome [H]

COG id: COG2390

COG function: function code K; Transcriptional regulator, contains sigma factor-related N-terminal domain

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sorC transcriptional regulatory family [H]

Homologues:

Organism=Escherichia coli, GI87082414, Length=306, Percent_Identity=27.4509803921569, Blast_Score=105, Evalue=5e-24,
Organism=Escherichia coli, GI1787791, Length=325, Percent_Identity=27.6923076923077, Blast_Score=103, Evalue=1e-23,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR007630
- InterPro:   IPR007324
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04545 Sigma70_r4; PF04198 Sugar-bind [H]

EC number: NA

Molecular weight: Translated: 35967; Mature: 35967

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMHKNNEQKTEGNAMSKQDEQRLLVKIATLYYSENKKQSEIASLLHLSQSFVSRALTRCQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KEGLVKITVVQPTNIFVDLEKAIEERFGIRQAIVVDVGENASYSQVKHAIGSAAAHYVET
HCCCEEEEEECCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
RLRPEDLVGISSWSSTIRCMVDEMHPQNIRAAGVIQLLGGVGPNGNVQATILTQQLAAHL
CCCHHHHEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
GCPAWLLPSQSIEHSVEERSRLVNSPDVAAVVAKFAEVDVAIVGIGELEPSQLLKNSGNY
CCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCH
YNETMLQLLAARGAVGDICLHYYNAAGKPVLSQDEDPVIGMELDQIRRCPQVIALAGGVD
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHCCHHHHHHCCCCC
KENAIRGALQGDYIDVLITDFPTARALIKG
HHHHHHHCCCCCEEEEEEECCCHHHHHHCC
>Mature Secondary Structure
MMHKNNEQKTEGNAMSKQDEQRLLVKIATLYYSENKKQSEIASLLHLSQSFVSRALTRCQ
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KEGLVKITVVQPTNIFVDLEKAIEERFGIRQAIVVDVGENASYSQVKHAIGSAAAHYVET
HCCCEEEEEECCCCEEEEHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHH
RLRPEDLVGISSWSSTIRCMVDEMHPQNIRAAGVIQLLGGVGPNGNVQATILTQQLAAHL
CCCHHHHEEHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHH
GCPAWLLPSQSIEHSVEERSRLVNSPDVAAVVAKFAEVDVAIVGIGELEPSQLLKNSGNY
CCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCEEEEEECCCCHHHHHHCCCCH
YNETMLQLLAARGAVGDICLHYYNAAGKPVLSQDEDPVIGMELDQIRRCPQVIALAGGVD
HHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCEECCCHHHHHCCHHHHHHCCCCC
KENAIRGALQGDYIDVLITDFPTARALIKG
HHHHHHHCCCCCEEEEEEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8550462; 8867804; 9384377; 10074062; 10714997 [H]