| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401928
Identifier: 150401928
GI number: 150401928
Start: 1567530
End: 1568309
Strand: Direct
Name: 150401928
Synonym: Maeo_1506
Alternate gene names: NA
Gene position: 1567530-1568309 (Clockwise)
Preceding gene: 150401927
Following gene: 150401929
Centisome position: 99.87
GC content: 27.18
Gene sequence:
>780_bases ATGAAAAAAATGGGAGCTCTTGAAATATTGGTAATATTGTCAGTATTGATAACTGGCGGTGTTTTAGGATATAAATTAAT GACACAAAATGAAAATACTGGGTATGAATTTGACGGAGACCAAATGTATAAATGTGCATGGGTTTCTGAAAAAATAATAA ATAAAAATTTTCCGTTATATGCTGAGGTAAAAGGAAAATGGACTTCATCGGGAAAAGATTTTGATGGGATTGTTTTAATT ACAAAAGCAAGAGGCGGAACTTTATATGGCATATATAATAATAAGTTAATAAAATTGGGCGGGGAAATGGCACATGTGGA AGACATAGCCTGTAAAAAAATAATATTAAAACCCGTTGGAAATACAATAATTAAATATGATATAAACCCAATTGAATGTA AATCGTTTAAAGGGCTTAATGAGAATATAGAACATTCAAAAGGTCAATATATTAATTCAAATATCACAATACTTAAAACA TATATTGACGGTTCTATTGGTATTGACTGCAACACATTTAAACCATCGGAACAACAGAAATTAAAAAATAATATTAATCT TGATTTGAATTCTAATGCCTTAAAGATTGTTTTTATAGATGAAGGCATAAATTTAATTGGAAAAATAGATATAAACGACT TAAATAGTTATGGAGAATATATTAATTCAACAAATATGGTAACTTCAAAACTAACAGTATATTTAATAGTAAATGAAACA GATGTAAAATTATCAAAAGATATCATTGAGAAATACGACCCAACCATTACAAAATTGTAA
Upstream 100 bases:
>100_bases ACTATTAGTTTTTATGGCCAATATCAAATAATTTTTTTATTTATCATTACTTATTATTATTATTATTTATTACTATTTTA TCCTTATCTTTGGAGATATT
Downstream 100 bases:
>100_bases ATCTTATACCTTATATAATGTGTAATATATAATATATTAATTAATATAGAGATGGTTATATAATGGAGCTCCCTACTATA AACACAATAAAAGAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 259
Protein sequence:
>259_residues MKKMGALEILVILSVLITGGVLGYKLMTQNENTGYEFDGDQMYKCAWVSEKIINKNFPLYAEVKGKWTSSGKDFDGIVLI TKARGGTLYGIYNNKLIKLGGEMAHVEDIACKKIILKPVGNTIIKYDINPIECKSFKGLNENIEHSKGQYINSNITILKT YIDGSIGIDCNTFKPSEQQKLKNNINLDLNSNALKIVFIDEGINLIGKIDINDLNSYGEYINSTNMVTSKLTVYLIVNET DVKLSKDIIEKYDPTITKL
Sequences:
>Translated_259_residues MKKMGALEILVILSVLITGGVLGYKLMTQNENTGYEFDGDQMYKCAWVSEKIINKNFPLYAEVKGKWTSSGKDFDGIVLI TKARGGTLYGIYNNKLIKLGGEMAHVEDIACKKIILKPVGNTIIKYDINPIECKSFKGLNENIEHSKGQYINSNITILKT YIDGSIGIDCNTFKPSEQQKLKNNINLDLNSNALKIVFIDEGINLIGKIDINDLNSYGEYINSTNMVTSKLTVYLIVNET DVKLSKDIIEKYDPTITKL >Mature_259_residues MKKMGALEILVILSVLITGGVLGYKLMTQNENTGYEFDGDQMYKCAWVSEKIINKNFPLYAEVKGKWTSSGKDFDGIVLI TKARGGTLYGIYNNKLIKLGGEMAHVEDIACKKIILKPVGNTIIKYDINPIECKSFKGLNENIEHSKGQYINSNITILKT YIDGSIGIDCNTFKPSEQQKLKNNINLDLNSNALKIVFIDEGINLIGKIDINDLNSYGEYINSTNMVTSKLTVYLIVNET DVKLSKDIIEKYDPTITKL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR021586 [H]
Pfam domain/function: PF11495 Regulator_TrmB [H]
EC number: NA
Molecular weight: Translated: 28953; Mature: 28953
Theoretical pI: Translated: 7.90; Mature: 7.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKMGALEILVILSVLITGGVLGYKLMTQNENTGYEFDGDQMYKCAWVSEKIINKNFPLY CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEEEHHHHHHCCCCCEE AEVKGKWTSSGKDFDGIVLITKARGGTLYGIYNNKLIKLGGEMAHVEDIACKKIILKPVG EEEECEECCCCCCCCCEEEEEECCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHEECCC NTIIKYDINPIECKSFKGLNENIEHSKGQYINSNITILKTYIDGSIGIDCNTFKPSEQQK CEEEEEECCEEEECCCCCCCCCCCCCCCCEECCCEEEEEEEECCEECEEECCCCCCHHHH LKNNINLDLNSNALKIVFIDEGINLIGKIDINDLNSYGEYINSTNMVTSKLTVYLIVNET HHCCCCEEECCCEEEEEEEECCCCEEEEEECCCCHHHHHHHCCCCEEEEEEEEEEEEECC DVKLSKDIIEKYDPTITKL CCHHHHHHHHHCCCCCCCC >Mature Secondary Structure MKKMGALEILVILSVLITGGVLGYKLMTQNENTGYEFDGDQMYKCAWVSEKIINKNFPLY CCCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEECCCCEEEEEEHHHHHHCCCCCEE AEVKGKWTSSGKDFDGIVLITKARGGTLYGIYNNKLIKLGGEMAHVEDIACKKIILKPVG EEEECEECCCCCCCCCEEEEEECCCCEEEEEECCEEEEECCCCHHHHHHHHHHHHEECCC NTIIKYDINPIECKSFKGLNENIEHSKGQYINSNITILKTYIDGSIGIDCNTFKPSEQQK CEEEEEECCEEEECCCCCCCCCCCCCCCCEECCCEEEEEEEECCEECEEECCCCCCHHHH LKNNINLDLNSNALKIVFIDEGINLIGKIDINDLNSYGEYINSTNMVTSKLTVYLIVNET HHCCCCEEECCCEEEEEEEECCCCEEEEEECCCCHHHHHHHCCCCEEEEEEEEEEEEECC DVKLSKDIIEKYDPTITKL CCHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]