| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401910
Identifier: 150401910
GI number: 150401910
Start: 1549782
End: 1551590
Strand: Reverse
Name: 150401910
Synonym: Maeo_1488
Alternate gene names: NA
Gene position: 1551590-1549782 (Counterclockwise)
Preceding gene: 150401913
Following gene: 150401909
Centisome position: 98.86
GC content: 29.02
Gene sequence:
>1809_bases ATGCTTGAACCAATTTATTATAATATTGGAAGAAGTTGTAAAGAAACTTATTTTAAAAAGGATTACGACAATAAAAACAT AAATATTACTCCAAAATTAATCGACGACAATATTATTAAAAATATCAAACGACCATTATTAAAAATACCTTTTGATGCAC CTGAAAAAGTTGCAAACTATATTTTTGAACAAAATAAAGATAAAATAAAAGGAACGATTAAATTAAGCGATAACGATAAC GATAATAACGATAATAACGATAATAACGATAGTGATAAAGATAATAATAGTATAAATTATTATATATTAAATCTCGGAAA ATATATTGAAAAAATCAACGAATTAACCGAAGAATTAAAAAATACTGATTTAATAATAATTGCAGATGGAAGAAGATTAA TTAATAGAAAAGAACTTTTATTAATATCTGAATTAAGAAATATAATTTCCCCAAACACTGCAATATATTTCCCAACAGCA TTGCCAAATGAAATTCCACTGCTAACATATATGGGTGTAGATTACTTTGATAATTCTTCGGCATCATATTATGCTTCAAA AGGATACAAATTTACAAAAAATAGAATAATGGAAACAACCATACAATTTAATGAATTGGTAGAGCACAATAAATCTATTA TAAGGGAGCTCCTTGAAGAAACAAAATACTGTATTAAAGAGGGTAGTTTAAGAAATTTAGTTGAAGAAACCAGTATTTCA AATCCATACCTTAGGGGCAATTATAAGAGATTTAATCCTGATGTAAGAAATATCCCTCTATCCAGTGGGAAAAAAATAAT TGTATCCATTGACGAAACTACAATTCCAGAGGTAAAAAAATACACTGAAAGGCTTGGCAATTATGAAGCTTTTACAAATA TTGTTGTATTACTTCCTTGTTCGTCAAAAAAACCATATTCGTTCTCAAAATCTCACCAATACTTTGTAAATGCAATTAGA TCTTCAAATACAGTAGTTGAAGAAGTTGTATTGACCTCCCCATATGGTGTAGTTCCAAGAGCTTTGGAGGGAATAGTAAA TTATGATATTCCTGTTGTTGGGTCATGGAGCTCCGAGGAAATTGAATTTATTAACAGGCACTTAAAAACTTATTTAGATA ATACGGATAATAAATTTGGAACTATATCTGTAATAGCTCACCTTCCAAAACATTATTATGAAATATTGGATAAAAATTTA ATAGAAAAATATGATATAATATCTACGGTAGAAGATGACCGACCCACGACCAATAATTCGCTTGCTACATTAAAAGATAC CCTCAAAGAAATTAGTGCAGATAAATACGGTATTGATAATAACAAAGAGAATAATAAAAATGAACGAGATAATAAGGATA ATAATGCCCCAGTAAAAGCCAATAGGCCCAGTATAAGAAAACAGGTGATGCACAACTACCAGCAACTTGCAAAATTCCAA TTTGGCAGTAATTTCATACCTGATGATACAGTAATTAAAGGAAGGCATAAAAAGTTTTTTGCGAAAATAAATAATAAATT AACTCAGATATGTTCATTAAATTATGAAAATGGGCTTTTTGTGCTAACCTATGAGGGTGGAAAATTATTGGGAAAAAATA AATGGGTAGAAGTTAATTTTAAGGCTAAAAAAGGCTCATTATTTGCACCTGGTTTTAAGGATTGTGATGAAAATATATCC GTAGGAGATGAAATCGTAATAATTTATGAGGGGGAAGTAATTGGTGTAGGTAGGGCATCAATGAGTGGGGCAGAAATGAA AAAAGCTAAAAATGGGGCATTGTTAAATATTAGACACTGTAAAAAATAA
Upstream 100 bases:
>100_bases TTGAATTCAAAATCTTCGATTTTGTTCAATATCCGAAGGATATTGTAGATTTTCCCCTGTAAAAAAATATATGAATAATC AATATATAATGTGATAAAAA
Downstream 100 bases:
>100_bases CATATGATGCGTGTTCAGGATTGTCATTAAAATTAAAACTACAAATAACAGGACCATTATGATTTTGTAGTTAAATTTTT AATATTTTATGATTGTTATC
Product: PUA domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 602; Mature: 602
Protein sequence:
>602_residues MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANYIFEQNKDKIKGTIKLSDNDN DNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELKNTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTA LPNEIPLLTYMGVDYFDNSSASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPCSSKKPYSFSKSHQYFVNAIR SSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEEIEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNL IEKYDIISTVEDDRPTTNNSLATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNFKAKKGSLFAPGFKDCDENIS VGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHCKK
Sequences:
>Translated_602_residues MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANYIFEQNKDKIKGTIKLSDNDN DNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELKNTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTA LPNEIPLLTYMGVDYFDNSSASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPCSSKKPYSFSKSHQYFVNAIR SSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEEIEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNL IEKYDIISTVEDDRPTTNNSLATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNFKAKKGSLFAPGFKDCDENIS VGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHCKK >Mature_602_residues MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANYIFEQNKDKIKGTIKLSDNDN DNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELKNTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTA LPNEIPLLTYMGVDYFDNSSASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPCSSKKPYSFSKSHQYFVNAIR SSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEEIEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNL IEKYDIISTVEDDRPTTNNSLATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNFKAKKGSLFAPGFKDCDENIS VGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHCKK
Specific function: Unknown
COG id: COG1549
COG function: function code J; Queuine tRNA-ribosyltransferases, contain PUA domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PUA domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002478 - InterPro: IPR015947 - InterPro: IPR002616 [H]
Pfam domain/function: PF01472 PUA; PF01702 TGT [H]
EC number: NA
Molecular weight: Translated: 68973; Mature: 68973
Theoretical pI: Translated: 8.58; Mature: 8.58
Prosite motif: PS50890 PUA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANY CCCCEEHHCCCHHHHHHHHCCCCCCCCEEEHEECCHHHHHHHHHHHEECCCCCHHHHHHH IFEQNKDKIKGTIKLSDNDNDNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELK HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHC NTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTALPNEIPLLTYMGVDYFDNSS CCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEECCCC ASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS CCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPC CCEEECCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHCCCEEEEEEC SSKKPYSFSKSHQYFVNAIRSSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEE CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCHHH IEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNLIEKYDIISTVEDDRPTTNNS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNF CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCEEEEEE KAKKGSLFAPGFKDCDENISVGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHC EECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCHHHHHCCCCCEEEECCC KK CC >Mature Secondary Structure MLEPIYYNIGRSCKETYFKKDYDNKNINITPKLIDDNIIKNIKRPLLKIPFDAPEKVANY CCCCEEHHCCCHHHHHHHHCCCCCCCCEEEHEECCHHHHHHHHHHHEECCCCCHHHHHHH IFEQNKDKIKGTIKLSDNDNDNNDNNDNNDSDKDNNSINYYILNLGKYIEKINELTEELK HHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHHC NTDLIIIADGRRLINRKELLLISELRNIISPNTAIYFPTALPNEIPLLTYMGVDYFDNSS CCCEEEEECCHHHHCHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCEEEEECCEEECCCC ASYYASKGYKFTKNRIMETTIQFNELVEHNKSIIRELLEETKYCIKEGSLRNLVEETSIS CCEEECCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCC NPYLRGNYKRFNPDVRNIPLSSGKKIIVSIDETTIPEVKKYTERLGNYEAFTNIVVLLPC CCEEECCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHCCHHHCCCEEEEEEC SSKKPYSFSKSHQYFVNAIRSSNTVVEEVVLTSPYGVVPRALEGIVNYDIPVVGSWSSEE CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHCCCCCHHHHHHHHHHCCCCCEEECCCHHH IEFINRHLKTYLDNTDNKFGTISVIAHLPKHYYEILDKNLIEKYDIISTVEDDRPTTNNS HHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC LATLKDTLKEISADKYGIDNNKENNKNERDNKDNNAPVKANRPSIRKQVMHNYQQLAKFQ HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH FGSNFIPDDTVIKGRHKKFFAKINNKLTQICSLNYENGLFVLTYEGGKLLGKNKWVEVNF CCCCCCCCCCEECCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCEEECCCCEEEEEE KAKKGSLFAPGFKDCDENISVGDEIVIIYEGEVIGVGRASMSGAEMKKAKNGALLNIRHC EECCCCCCCCCCCCCCCCCCCCCEEEEEECCEEEECCCCCCCCHHHHHCCCCCEEEECCC KK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]