Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401874

Identifier: 150401874

GI number: 150401874

Start: 1510319

End: 1511554

Strand: Direct

Name: 150401874

Synonym: Maeo_1452

Alternate gene names: NA

Gene position: 1510319-1511554 (Clockwise)

Preceding gene: 150401873

Following gene: 150401877

Centisome position: 96.23

GC content: 28.88

Gene sequence:

>1236_bases
ATGGATAAAGATAATATCAAGAAAATTTACAAAAATCAAAGATTTTTGAATTCTCTAACAAAAATAAAGGCAATAGCAAA
ACGAGAAATATTAAGCAATATCAAACGGAAGCAGTTTATTTTAATGATTTTACTTGTTCCGGTTGTGATGATATTAATTA
CAATGGCTACGGCATATTTTACAGCGGAAGTTGAAGACCAAAAAATAGGATATATTGATAACTTTGGAATGGATATTCCG
CCCCTGTTTAAATCATTTAATCCACTTAAACAGGAAAATATCACGATGCAATTTATAAAATATAATAATACGGAAATCGG
AAAAAATGCCGTAATAAATGGGGATATCAATGCATTTATAATAATTCCTAAAAATTATCTTGAAAATGAACCTATGACTA
TTTATTCAAAATCAAAAACAATCCCCTCAATTATAAGGAGCTCCATAAAAGATATTGTATTATCCACAGTATTAAAGGAC
AAAGTAGATGAAAAAACATATAATATTGTAAAATCACCGATTAATCTTGAAATATACAGTATAAGCAAAAAAGGAGAGGA
AAAAGAAAATATAATTTCTCAAATGATGCCATTTGGCTTTGCCATGCTTTTATATATTGCCATAATTTCCGTATCTGGAC
TATGCACCAACAGTGTAATTGAAGAAAAACAGCATAGAATCATGGAACTCCTGCTTACAACAACAAATTCAACAAATATA
TTGATTGGAAAAATAATTGGAATATCATTTTTAGGATTAATTCAAATGAGTATATGGATTTTATTTGCCCTCCCAATTAT
ATCTATGGTAGCATTGAAAATTCCGCCGTTTTTAATGGTTTCCGCGGTTGTGTTCTTTGTAATGGCATATTTATTTTATG
TGTCATTGTTAAGTGGGCTATCCTCATTATTTACGACTCAAAAAGATGCGGGGCAGATTATAAGTCCGATTATAATGGTG
CAAATAATACCTTTATTAATTCTTACGCTAATTCAATCTAATCCAAATCATTACATTATTAAAATATTGTCATTTGTTCC
TTTCACAGCTCCGCAAGTTATGCTTATGAGAATGAGTATAACTCACATAGAACCTTTGGAGGTTTATTTATCTATGGGTG
TTATGTTTATATTTACGGTATTATCTTTCATATCAGCCGTGAAATTATTTAAAATAGGTTCTATGATTTACGATGAGGAA
ATGACAATTAAAAAAGTAATTAAAATTATCAAATAA

Upstream 100 bases:

>100_bases
GGCGAAGCATTGCAATTATTAAATGATGAAAATATAAAAAATAATATTGTTAAATTTGAAGTAAGGAGCTCCTTGGAAGA
ATTATTTATGGAGGATAATA

Downstream 100 bases:

>100_bases
AAAATATTAAATAAAAAAATATTCAATTAATATTTTCCCATTTTTAAAGCAATATAGGGAATTATAACTAATAACAACAA
TACGATATTAATGGAATCGG

Product: putative ABC-2 type transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MDKDNIKKIYKNQRFLNSLTKIKAIAKREILSNIKRKQFILMILLVPVVMILITMATAYFTAEVEDQKIGYIDNFGMDIP
PLFKSFNPLKQENITMQFIKYNNTEIGKNAVINGDINAFIIIPKNYLENEPMTIYSKSKTIPSIIRSSIKDIVLSTVLKD
KVDEKTYNIVKSPINLEIYSISKKGEEKENIISQMMPFGFAMLLYIAIISVSGLCTNSVIEEKQHRIMELLLTTTNSTNI
LIGKIIGISFLGLIQMSIWILFALPIISMVALKIPPFLMVSAVVFFVMAYLFYVSLLSGLSSLFTTQKDAGQIISPIIMV
QIIPLLILTLIQSNPNHYIIKILSFVPFTAPQVMLMRMSITHIEPLEVYLSMGVMFIFTVLSFISAVKLFKIGSMIYDEE
MTIKKVIKIIK

Sequences:

>Translated_411_residues
MDKDNIKKIYKNQRFLNSLTKIKAIAKREILSNIKRKQFILMILLVPVVMILITMATAYFTAEVEDQKIGYIDNFGMDIP
PLFKSFNPLKQENITMQFIKYNNTEIGKNAVINGDINAFIIIPKNYLENEPMTIYSKSKTIPSIIRSSIKDIVLSTVLKD
KVDEKTYNIVKSPINLEIYSISKKGEEKENIISQMMPFGFAMLLYIAIISVSGLCTNSVIEEKQHRIMELLLTTTNSTNI
LIGKIIGISFLGLIQMSIWILFALPIISMVALKIPPFLMVSAVVFFVMAYLFYVSLLSGLSSLFTTQKDAGQIISPIIMV
QIIPLLILTLIQSNPNHYIIKILSFVPFTAPQVMLMRMSITHIEPLEVYLSMGVMFIFTVLSFISAVKLFKIGSMIYDEE
MTIKKVIKIIK
>Mature_411_residues
MDKDNIKKIYKNQRFLNSLTKIKAIAKREILSNIKRKQFILMILLVPVVMILITMATAYFTAEVEDQKIGYIDNFGMDIP
PLFKSFNPLKQENITMQFIKYNNTEIGKNAVINGDINAFIIIPKNYLENEPMTIYSKSKTIPSIIRSSIKDIVLSTVLKD
KVDEKTYNIVKSPINLEIYSISKKGEEKENIISQMMPFGFAMLLYIAIISVSGLCTNSVIEEKQHRIMELLLTTTNSTNI
LIGKIIGISFLGLIQMSIWILFALPIISMVALKIPPFLMVSAVVFFVMAYLFYVSLLSGLSSLFTTQKDAGQIISPIIMV
QIIPLLILTLIQSNPNHYIIKILSFVPFTAPQVMLMRMSITHIEPLEVYLSMGVMFIFTVLSFISAVKLFKIGSMIYDEE
MTIKKVIKIIK

Specific function: Unknown

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To B.subtilis yhaP [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46674; Mature: 46674

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDKDNIKKIYKNQRFLNSLTKIKAIAKREILSNIKRKQFILMILLVPVVMILITMATAYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEVEDQKIGYIDNFGMDIPPLFKSFNPLKQENITMQFIKYNNTEIGKNAVINGDINAFI
EEECCCCCCCCHHCCCCCCCHHHHCCCCCHHCCCEEEEEEECCCCCCCCCEEECCCCEEE
IIPKNYLENEPMTIYSKSKTIPSIIRSSIKDIVLSTVLKDKVDEKTYNIVKSPINLEIYS
EEEHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
ISKKGEEKENIISQMMPFGFAMLLYIAIISVSGLCTNSVIEEKQHRIMELLLTTTNSTNI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
LIGKIIGISFLGLIQMSIWILFALPIISMVALKIPPFLMVSAVVFFVMAYLFYVSLLSGL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SSLFTTQKDAGQIISPIIMVQIIPLLILTLIQSNPNHYIIKILSFVPFTAPQVMLMRMSI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
THIEPLEVYLSMGVMFIFTVLSFISAVKLFKIGSMIYDEEMTIKKVIKIIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC
>Mature Secondary Structure
MDKDNIKKIYKNQRFLNSLTKIKAIAKREILSNIKRKQFILMILLVPVVMILITMATAYF
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TAEVEDQKIGYIDNFGMDIPPLFKSFNPLKQENITMQFIKYNNTEIGKNAVINGDINAFI
EEECCCCCCCCHHCCCCCCCHHHHCCCCCHHCCCEEEEEEECCCCCCCCCEEECCCCEEE
IIPKNYLENEPMTIYSKSKTIPSIIRSSIKDIVLSTVLKDKVDEKTYNIVKSPINLEIYS
EEEHHHCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE
ISKKGEEKENIISQMMPFGFAMLLYIAIISVSGLCTNSVIEEKQHRIMELLLTTTNSTNI
ECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCE
LIGKIIGISFLGLIQMSIWILFALPIISMVALKIPPFLMVSAVVFFVMAYLFYVSLLSGL
EHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
SSLFTTQKDAGQIISPIIMVQIIPLLILTLIQSNPNHYIIKILSFVPFTAPQVMLMRMSI
HHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHH
THIEPLEVYLSMGVMFIFTVLSFISAVKLFKIGSMIYDEEMTIKKVIKIIK
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]