| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150401802
Identifier: 150401802
GI number: 150401802
Start: 1444461
End: 1445627
Strand: Reverse
Name: 150401802
Synonym: Maeo_1380
Alternate gene names: NA
Gene position: 1445627-1444461 (Counterclockwise)
Preceding gene: 150401830
Following gene: 150401801
Centisome position: 92.11
GC content: 29.39
Gene sequence:
>1167_bases GTGGAAATAACTTCAACAAATATATTAATGGTATTTTTAATAATTTGGTCAATAATATATATAATAAATACTAAAAAGCA GAAACTCGAAAAAAAATCAGATAATGGCGAAAATGAATACGAAACCTCACAAATGGGATTAAAAATATATTATGGATTAT TTGGAATATTAAGGACCTCAGCAGGATTAAAAATAATAGATAAAGTTGGAAAATACAAATTTTGGCGAAAATTAAGCCTA TGGTTAATTCCTATCTGTATGATAATATCTATATTAACGCTGTATATGTTTATAAATTCCACGATTAATTTATTTTCTGG AACAGTCTCCAAAGAGACATCTAAACCAATTATATTTTTATTTGGAAATTTAATACCATGGATTCCCGGAATTGTGGCAT TAATCATAGGAATAACGCTTCACGAATTAGCACATGGTATAGTTGCTAGGGCATATAATTTAAAAATAAAAAGCACAGGT TTATTGTTGGGCTTGGGTATTCCATTGGGTGCCTTTGTAGAATTAAGCGATGAATTTAAAGATACCAATAACAAAATTAG GGGTGCAGTTGCATCAGCTGGACCAATTGCAAATGTAATAATATTTGTTATAGCAATATTTGCAATGCCTTTTGCAATGA ATATGGATTCTCCGATAACCATATCAAATGTGGCAGAGGATTATCCTGCACAGGGAGTATTATTAAAGGGAGATGTAATA TATTCAATTAACGACCACAAAATAAACTCTTTAACTAGTTTTCAAAATGCCGTAAAGGATATTAAACCAAATGAAAAAAT TAAAATAACAATATTAAGAAATAACAAATTGATAACCATAAACTCAATTACTACCTCAACAGATGGATTAATCGGAATAA ATGCCGAAGCATCAGCGGGTATATCGTTTATACTTCAAACTCTGTATTGGACTAGCATGTTAAATTTAATGCTTGGATTT TTTAATTTGCTTCCAGCACTGCCCCTTGATGGATTCCATATTTGGAACGCACTACCAGAATTGATAAGAGATTTAAGAAA GGATAATAAATTATTAAATAAGATTTCAATGATTACAGAATACTTAATAAATGAAAGAAGCTTAACCTCAATTAGTTTAA TGGTTTGGGGATTAATATTTATATCAATGGCATATTCATTTATGTAA
Upstream 100 bases:
>100_bases GACATTTTATGGAACGGCATATTTGTAATTAGTATTTACGGAGCTCCCAATATGCTAAGCCCAAATACATTATGACATAA ACATATTATCTGGTGAAATC
Downstream 100 bases:
>100_bases TATTGATATATATTATTTTTATGTATGTTATTTTATTATTTTTCCCAAATAAAGGTGCTATTATGATTACAATAATTTGT GCAGAAGGCGGTTCCTCAAT
Product: peptidase M50
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MEITSTNILMVFLIIWSIIYIINTKKQKLEKKSDNGENEYETSQMGLKIYYGLFGILRTSAGLKIIDKVGKYKFWRKLSL WLIPICMIISILTLYMFINSTINLFSGTVSKETSKPIIFLFGNLIPWIPGIVALIIGITLHELAHGIVARAYNLKIKSTG LLLGLGIPLGAFVELSDEFKDTNNKIRGAVASAGPIANVIIFVIAIFAMPFAMNMDSPITISNVAEDYPAQGVLLKGDVI YSINDHKINSLTSFQNAVKDIKPNEKIKITILRNNKLITINSITTSTDGLIGINAEASAGISFILQTLYWTSMLNLMLGF FNLLPALPLDGFHIWNALPELIRDLRKDNKLLNKISMITEYLINERSLTSISLMVWGLIFISMAYSFM
Sequences:
>Translated_388_residues MEITSTNILMVFLIIWSIIYIINTKKQKLEKKSDNGENEYETSQMGLKIYYGLFGILRTSAGLKIIDKVGKYKFWRKLSL WLIPICMIISILTLYMFINSTINLFSGTVSKETSKPIIFLFGNLIPWIPGIVALIIGITLHELAHGIVARAYNLKIKSTG LLLGLGIPLGAFVELSDEFKDTNNKIRGAVASAGPIANVIIFVIAIFAMPFAMNMDSPITISNVAEDYPAQGVLLKGDVI YSINDHKINSLTSFQNAVKDIKPNEKIKITILRNNKLITINSITTSTDGLIGINAEASAGISFILQTLYWTSMLNLMLGF FNLLPALPLDGFHIWNALPELIRDLRKDNKLLNKISMITEYLINERSLTSISLMVWGLIFISMAYSFM >Mature_388_residues MEITSTNILMVFLIIWSIIYIINTKKQKLEKKSDNGENEYETSQMGLKIYYGLFGILRTSAGLKIIDKVGKYKFWRKLSL WLIPICMIISILTLYMFINSTINLFSGTVSKETSKPIIFLFGNLIPWIPGIVALIIGITLHELAHGIVARAYNLKIKSTG LLLGLGIPLGAFVELSDEFKDTNNKIRGAVASAGPIANVIIFVIAIFAMPFAMNMDSPITISNVAEDYPAQGVLLKGDVI YSINDHKINSLTSFQNAVKDIKPNEKIKITILRNNKLITINSITTSTDGLIGINAEASAGISFILQTLYWTSMLNLMLGF FNLLPALPLDGFHIWNALPELIRDLRKDNKLLNKISMITEYLINERSLTSISLMVWGLIFISMAYSFM
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To S.solfataricus C04034 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR001193 - InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 43342; Mature: 43342
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEITSTNILMVFLIIWSIIYIINTKKQKLEKKSDNGENEYETSQMGLKIYYGLFGILRTS CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AGLKIIDKVGKYKFWRKLSLWLIPICMIISILTLYMFINSTINLFSGTVSKETSKPIIFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE FGNLIPWIPGIVALIIGITLHELAHGIVARAYNLKIKSTGLLLGLGIPLGAFVELSDEFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHEECHHHH DTNNKIRGAVASAGPIANVIIFVIAIFAMPFAMNMDSPITISNVAEDYPAQGVLLKGDVI CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCEEEECCEE YSINDHKINSLTSFQNAVKDIKPNEKIKITILRNNKLITINSITTSTDGLIGINAEASAG EEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEECEECCCCEEEECCCHHHH ISFILQTLYWTSMLNLMLGFFNLLPALPLDGFHIWNALPELIRDLRKDNKLLNKISMITE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLINERSLTSISLMVWGLIFISMAYSFM HHHCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MEITSTNILMVFLIIWSIIYIINTKKQKLEKKSDNGENEYETSQMGLKIYYGLFGILRTS CCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHC AGLKIIDKVGKYKFWRKLSLWLIPICMIISILTLYMFINSTINLFSGTVSKETSKPIIFL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE FGNLIPWIPGIVALIIGITLHELAHGIVARAYNLKIKSTGLLLGLGIPLGAFVELSDEFK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCHHHHHEECHHHH DTNNKIRGAVASAGPIANVIIFVIAIFAMPFAMNMDSPITISNVAEDYPAQGVLLKGDVI CCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCCEEHHHHHHCCCCCCEEEECCEE YSINDHKINSLTSFQNAVKDIKPNEKIKITILRNNKLITINSITTSTDGLIGINAEASAG EEECCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCEEEEEEECEECCCCEEEECCCHHHH ISFILQTLYWTSMLNLMLGFFNLLPALPLDGFHIWNALPELIRDLRKDNKLLNKISMITE HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YLINERSLTSISLMVWGLIFISMAYSFM HHHCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]