| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401790
Identifier: 150401790
GI number: 150401790
Start: 1430562
End: 1431794
Strand: Reverse
Name: 150401790
Synonym: Maeo_1368
Alternate gene names: NA
Gene position: 1431794-1430562 (Counterclockwise)
Preceding gene: 150401793
Following gene: 150401789
Centisome position: 91.23
GC content: 36.09
Gene sequence:
>1233_bases TTGGGGAGCTCCGACAAACCAACTAAATCCAATAGTGAGAAAGTAGTAATCACAGTTGATAAATTAAAACAAATGATTAG AAATAACGAAGAAGATAAGATTGATGAAATAGACATAATTACTACGGCAACTTGTGGTATTATGTCTGGGACTATGGGTA TTTTCCATATCCCTGTTGCAGAGCCTAAATCATTTAGAAAAGCCGAAAAGGTTTATTTAAATGGGGTAGAAGGATATGTA GGGCCTTGCCCCAATGAATTTTTAGGAACTGTTGATATTACTGTATATGGAACCAACTATACTGGCAATTATGGAGGAGG CTTTTTATTTAAAGACCTCATCTCCAAAAAAGAAGTAGCCGTAGAGGCTATTAGCAACGGCAAAACCTACAATAAAACCA TAACAATTGATGACATTCCCACGGCAAAAATGATTGGAACTAGAACGGCCTTTAAAAATTATGTTGCCCTCACAAACACA GGGGAAAAGGAAGAGTCCATAAAAACTATATTCCACAGAAGAAGATTAAAAAAAGGAGAGGCATCTTTTTCAGGTTGTGG GGAAATAAATCCACTTCAAAATATGAAATTAAGTAGTAATATAAAGGAGGCTGAAAAGGAGCTCCTTGGAAAAAAAATTT TATACAATGGTGCAGAAGGTATTATATTAGGATACGGCACAAGGCACTCAGCAGAAAGACCCAATATTATGATTTCGGCC GACATTAAAGAAATGGATGCCCATTTCGTAGGGGGATTTGTAACTTCAGGAGGAGTTGAGATTTATACTACAATAGCCAT TCCAATAGAAGTAAATAAAGAAAATAAAGAATATTTAAAAACCCTTGATGATGACATACCATTAACTCTCACAGATGTAC TGGGAAGAATTCCTGTTGGAATGGGAACCTATTCCGAAGTATGGAAAGATTGCGAATTAAGACCCAAAGTAAATGTTGAA AGATGTAGAATGTGCGATGTTTGTATAGCTCAAAGGTTATGCCCCACAAATGCAATTAAGCCAATAAAACATTTAGGAAA TAGGAGATTACCAAATGAAGATTGTTTTGGTTGTGGCGTTTGTGTCGAAGGTTGTCCATATGGCATATTCTCAATGAAAA GAAATAGCATCTGTGGAACCCCGATAACTTGCAGACAGTCAGACAGAGACAGAGCTTTAAAACTTGCCCGAGATTTAAAA AGAAGAATTGAAAAAGGGGAATTTGAATTATAG
Upstream 100 bases:
>100_bases TAGATTAGCTTTTTATAGTATAATTTAGTGAAAATGTCCGAAGATTAACTATATTTTTTTATTTATAGTAATCTTTATTA TTTATATTATGGTGATAATT
Downstream 100 bases:
>100_bases TGATTAAGAGAAATATTTAACTCCCAATATCTATAATATTATCCATTTGCAACACCTCAAATTGCAAAGGAAATTTTACC ATCGTGAAAATCTCGAAGAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 410; Mature: 409
Protein sequence:
>410_residues MGSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVAEPKSFRKAEKVYLNGVEGYV GPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVAVEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNT GEKEESIKTIFHRRRLKKGEASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVGMGTYSEVWKDCELRPKVNVE RCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGVCVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLK RRIEKGEFEL
Sequences:
>Translated_410_residues MGSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVAEPKSFRKAEKVYLNGVEGYV GPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVAVEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNT GEKEESIKTIFHRRRLKKGEASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVGMGTYSEVWKDCELRPKVNVE RCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGVCVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLK RRIEKGEFEL >Mature_409_residues GSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVAEPKSFRKAEKVYLNGVEGYVG PCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVAVEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNTG EKEESIKTIFHRRRLKKGEASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISAD IKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVGMGTYSEVWKDCELRPKVNVER CRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGVCVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLKR RIEKGEFEL
Specific function: Unknown
COG id: COG1900
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR002708 - InterPro: IPR017677 - ProDom: PD011569 [H]
Pfam domain/function: PF01837 DUF39 [H]
EC number: NA
Molecular weight: Translated: 45484; Mature: 45353
Theoretical pI: Translated: 8.19; Mature: 8.19
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVA CCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCCCEEEECCC EPKSFRKAEKVYLNGVEGYVGPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVA CCHHHHHHHHHEEECCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH VEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNTGEKEESIKTIFHRRRLKKGE HHHHHCCCEECEEEEECCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCC ASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVG CHHHHHHHHHCCEEECCCEEEEEEEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHHCCCC MGTYSEVWKDCELRPKVNVERCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGV CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCE CVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLKRRIEKGEFEL ECCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure GSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVA CCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCCCEEEECCC EPKSFRKAEKVYLNGVEGYVGPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVA CCHHHHHHHHHEEECCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH VEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNTGEKEESIKTIFHRRRLKKGE HHHHHCCCEECEEEEECCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCC ASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVG CHHHHHHHHHCCEEECCCEEEEEEEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHHCCCC MGTYSEVWKDCELRPKVNVERCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGV CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCE CVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLKRRIEKGEFEL ECCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]