Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401790

Identifier: 150401790

GI number: 150401790

Start: 1430562

End: 1431794

Strand: Reverse

Name: 150401790

Synonym: Maeo_1368

Alternate gene names: NA

Gene position: 1431794-1430562 (Counterclockwise)

Preceding gene: 150401793

Following gene: 150401789

Centisome position: 91.23

GC content: 36.09

Gene sequence:

>1233_bases
TTGGGGAGCTCCGACAAACCAACTAAATCCAATAGTGAGAAAGTAGTAATCACAGTTGATAAATTAAAACAAATGATTAG
AAATAACGAAGAAGATAAGATTGATGAAATAGACATAATTACTACGGCAACTTGTGGTATTATGTCTGGGACTATGGGTA
TTTTCCATATCCCTGTTGCAGAGCCTAAATCATTTAGAAAAGCCGAAAAGGTTTATTTAAATGGGGTAGAAGGATATGTA
GGGCCTTGCCCCAATGAATTTTTAGGAACTGTTGATATTACTGTATATGGAACCAACTATACTGGCAATTATGGAGGAGG
CTTTTTATTTAAAGACCTCATCTCCAAAAAAGAAGTAGCCGTAGAGGCTATTAGCAACGGCAAAACCTACAATAAAACCA
TAACAATTGATGACATTCCCACGGCAAAAATGATTGGAACTAGAACGGCCTTTAAAAATTATGTTGCCCTCACAAACACA
GGGGAAAAGGAAGAGTCCATAAAAACTATATTCCACAGAAGAAGATTAAAAAAAGGAGAGGCATCTTTTTCAGGTTGTGG
GGAAATAAATCCACTTCAAAATATGAAATTAAGTAGTAATATAAAGGAGGCTGAAAAGGAGCTCCTTGGAAAAAAAATTT
TATACAATGGTGCAGAAGGTATTATATTAGGATACGGCACAAGGCACTCAGCAGAAAGACCCAATATTATGATTTCGGCC
GACATTAAAGAAATGGATGCCCATTTCGTAGGGGGATTTGTAACTTCAGGAGGAGTTGAGATTTATACTACAATAGCCAT
TCCAATAGAAGTAAATAAAGAAAATAAAGAATATTTAAAAACCCTTGATGATGACATACCATTAACTCTCACAGATGTAC
TGGGAAGAATTCCTGTTGGAATGGGAACCTATTCCGAAGTATGGAAAGATTGCGAATTAAGACCCAAAGTAAATGTTGAA
AGATGTAGAATGTGCGATGTTTGTATAGCTCAAAGGTTATGCCCCACAAATGCAATTAAGCCAATAAAACATTTAGGAAA
TAGGAGATTACCAAATGAAGATTGTTTTGGTTGTGGCGTTTGTGTCGAAGGTTGTCCATATGGCATATTCTCAATGAAAA
GAAATAGCATCTGTGGAACCCCGATAACTTGCAGACAGTCAGACAGAGACAGAGCTTTAAAACTTGCCCGAGATTTAAAA
AGAAGAATTGAAAAAGGGGAATTTGAATTATAG

Upstream 100 bases:

>100_bases
TAGATTAGCTTTTTATAGTATAATTTAGTGAAAATGTCCGAAGATTAACTATATTTTTTTATTTATAGTAATCTTTATTA
TTTATATTATGGTGATAATT

Downstream 100 bases:

>100_bases
TGATTAAGAGAAATATTTAACTCCCAATATCTATAATATTATCCATTTGCAACACCTCAAATTGCAAAGGAAATTTTACC
ATCGTGAAAATCTCGAAGAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 410; Mature: 409

Protein sequence:

>410_residues
MGSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVAEPKSFRKAEKVYLNGVEGYV
GPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVAVEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNT
GEKEESIKTIFHRRRLKKGEASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA
DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVGMGTYSEVWKDCELRPKVNVE
RCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGVCVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLK
RRIEKGEFEL

Sequences:

>Translated_410_residues
MGSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVAEPKSFRKAEKVYLNGVEGYV
GPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVAVEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNT
GEKEESIKTIFHRRRLKKGEASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA
DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVGMGTYSEVWKDCELRPKVNVE
RCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGVCVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLK
RRIEKGEFEL
>Mature_409_residues
GSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVAEPKSFRKAEKVYLNGVEGYVG
PCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVAVEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNTG
EKEESIKTIFHRRRLKKGEASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISAD
IKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVGMGTYSEVWKDCELRPKVNVER
CRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGVCVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLKR
RIEKGEFEL

Specific function: Unknown

COG id: COG1900

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR002708
- InterPro:   IPR017677
- ProDom:   PD011569 [H]

Pfam domain/function: PF01837 DUF39 [H]

EC number: NA

Molecular weight: Translated: 45484; Mature: 45353

Theoretical pI: Translated: 8.19; Mature: 8.19

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVA
CCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCCCEEEECCC
EPKSFRKAEKVYLNGVEGYVGPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVA
CCHHHHHHHHHEEECCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
VEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNTGEKEESIKTIFHRRRLKKGE
HHHHHCCCEECEEEEECCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCC
ASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC
DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVG
CHHHHHHHHHCCEEECCCEEEEEEEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHHCCCC
MGTYSEVWKDCELRPKVNVERCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGV
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCE
CVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLKRRIEKGEFEL
ECCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
GSSDKPTKSNSEKVVITVDKLKQMIRNNEEDKIDEIDIITTATCGIMSGTMGIFHIPVA
CCCCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCEEEEEEHHHHHHHCCCCEEEECCC
EPKSFRKAEKVYLNGVEGYVGPCPNEFLGTVDITVYGTNYTGNYGGGFLFKDLISKKEVA
CCHHHHHHHHHEEECCCCCCCCCCCHHCCEEEEEEEECCCCCCCCCCHHHHHHHHHHHHH
VEAISNGKTYNKTITIDDIPTAKMIGTRTAFKNYVALTNTGEKEESIKTIFHRRRLKKGE
HHHHHCCCEECEEEEECCCCCHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHHHCCC
ASFSGCGEINPLQNMKLSSNIKEAEKELLGKKILYNGAEGIILGYGTRHSAERPNIMISA
CCCCCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEEEC
DIKEMDAHFVGGFVTSGGVEIYTTIAIPIEVNKENKEYLKTLDDDIPLTLTDVLGRIPVG
CHHHHHHHHHCCEEECCCEEEEEEEEEEEEECCCCHHHHHHCCCCCCEEHHHHHHHCCCC
MGTYSEVWKDCELRPKVNVERCRMCDVCIAQRLCPTNAIKPIKHLGNRRLPNEDCFGCGV
CCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCE
CVEGCPYGIFSMKRNSICGTPITCRQSDRDRALKLARDLKRRIEKGEFEL
ECCCCCCCHHEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]