Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is mtd

Identifier: 150401789

GI number: 150401789

Start: 1429470

End: 1430303

Strand: Reverse

Name: mtd

Synonym: Maeo_1367

Alternate gene names: 150401789

Gene position: 1430303-1429470 (Counterclockwise)

Preceding gene: 150401790

Following gene: 150401785

Centisome position: 91.13

GC content: 36.57

Gene sequence:

>834_bases
ATGGTTGTAAAAATAGGAATTATAAAATGTGGGAATATAGGAATGTCTCCATTAATTGATTTAGCATTAGACGAAAGAGC
AGACCGGACCAACATTGATGTAATATCAATCGGAAGTGGGGCAAAAATGGGGCCTAATCAAGTAGTAGAAGTAACTACAA
AAATGGTAGAGGATATAAAACCAGATTTCATAATATATGTTGGACCAAACCCAGCGGCACCAGGGCCTGCAAAAGCAAGA
GAAATTTTAAGTGCAAGTGATATTCCATCAGTTATAATAGGAGATGCTCCAGGGATTAAAGCAAAAGATAAAATGGCAGA
AGAGGGATTAGGATACATTTTAATTAAGTGCGACCCAATGATAGGGGCAAGAAGACAATTTTTAGACCCTGTTGAAATGG
CAATGTTTAATGCAGATGTAATAAGAGTATTGGCGGGAACAGGAGCTGCAAGAGTTGTTCAAAATGCTATTGATGACATA
GTTGAAGCAATTGAAGCTGGAAATGAAATCGAATTGCCAAAAATAGTAGTAACAGATGCAAAATCTGTTGCAGCAGCAGA
ATTCTCAAACCCATATGCAAAAGCTAAGGCAATGGCAGCATTTGCAATGGCCGAACAGGTTGCTAACATTGATGTTAAAG
GATGCTTTATGACAAAAGAAATGGAAAAATATATTCCCATAGTAGCATCAGCTCATGAAATGATAAGAACAGCAGCTAAA
TTAGTAGATGAAGCAAGAGAATTAGAAAAAGCTACCGATAGTGTAAGCAGAAAACCACACGGAGCAGATGGAAAAAGATT
AAATAAAACCAAATTAATGGAAAAACCAGAATAA

Upstream 100 bases:

>100_bases
ATAATCTAATACCCCATATTAGCATATAAAATAGCAACTAATAAATATAAGTGCTATGTAATGCATATTGTAATACTACA
TAAACAACAACGGTGATAAA

Downstream 100 bases:

>100_bases
CCATAAAAATATATTATTTTTATTTTATATCTTTATTATTATTTTATTTTATTTTTTTGATATCCAATAATGCATCTTTT
GGTGTATCTTTATCGGTTTT

Product: F420-dependent methylenetetrahydromethanopterin dehydrogenase

Products: NA

Alternate protein names: MTD; Coenzyme F420-dependent N5,N10-methylenetetrahydromethanopterin dehydrogenase

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIKPDFIIYVGPNPAAPGPAKAR
EILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPMIGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDI
VEAIEAGNEIELPKIVVTDAKSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK
LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE

Sequences:

>Translated_277_residues
MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIKPDFIIYVGPNPAAPGPAKAR
EILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPMIGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDI
VEAIEAGNEIELPKIVVTDAKSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK
LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE
>Mature_277_residues
MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIKPDFIIYVGPNPAAPGPAKAR
EILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPMIGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDI
VEAIEAGNEIELPKIVVTDAKSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK
LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE

Specific function: Catalyzes the reversible reduction of methenyl- H(4)MPT(+) to methylene-H(4)MPT

COG id: COG1927

COG function: function code C; Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MTD family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MTD_META3 (A6UWS1)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001325555.1
- ProteinModelPortal:   A6UWS1
- SMR:   A6UWS1
- STRING:   A6UWS1
- GeneID:   5327444
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_1367
- eggNOG:   arNOG04866
- HOGENOM:   HBG538567
- OMA:   IVASAHE
- ProtClustDB:   PRK00994
- BioCyc:   MAEO419665:MAEO_1367-MONOMER
- GO:   GO:0015948
- HAMAP:   MF_00058
- InterPro:   IPR002844
- PIRSF:   PIRSF005627
- ProDom:   PD017604

Pfam domain/function: PF01993 MTD; SSF102324 MeTD

EC number: =1.5.99.9

Molecular weight: Translated: 29631; Mature: 29631

Theoretical pI: Translated: 5.10; Mature: 5.10

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
5.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
5.1 %Met     (Mature Protein)
6.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIK
CEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
PDFIIYVGPNPAAPGPAKAREILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPM
CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCC
IGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDIVEAIEAGNEIELPKIVVTDA
CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
KSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIK
CEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC
PDFIIYVGPNPAAPGPAKAREILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPM
CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCC
IGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDIVEAIEAGNEIELPKIVVTDA
CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC
KSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK
HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH
LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE
HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA