| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is mtd
Identifier: 150401789
GI number: 150401789
Start: 1429470
End: 1430303
Strand: Reverse
Name: mtd
Synonym: Maeo_1367
Alternate gene names: 150401789
Gene position: 1430303-1429470 (Counterclockwise)
Preceding gene: 150401790
Following gene: 150401785
Centisome position: 91.13
GC content: 36.57
Gene sequence:
>834_bases ATGGTTGTAAAAATAGGAATTATAAAATGTGGGAATATAGGAATGTCTCCATTAATTGATTTAGCATTAGACGAAAGAGC AGACCGGACCAACATTGATGTAATATCAATCGGAAGTGGGGCAAAAATGGGGCCTAATCAAGTAGTAGAAGTAACTACAA AAATGGTAGAGGATATAAAACCAGATTTCATAATATATGTTGGACCAAACCCAGCGGCACCAGGGCCTGCAAAAGCAAGA GAAATTTTAAGTGCAAGTGATATTCCATCAGTTATAATAGGAGATGCTCCAGGGATTAAAGCAAAAGATAAAATGGCAGA AGAGGGATTAGGATACATTTTAATTAAGTGCGACCCAATGATAGGGGCAAGAAGACAATTTTTAGACCCTGTTGAAATGG CAATGTTTAATGCAGATGTAATAAGAGTATTGGCGGGAACAGGAGCTGCAAGAGTTGTTCAAAATGCTATTGATGACATA GTTGAAGCAATTGAAGCTGGAAATGAAATCGAATTGCCAAAAATAGTAGTAACAGATGCAAAATCTGTTGCAGCAGCAGA ATTCTCAAACCCATATGCAAAAGCTAAGGCAATGGCAGCATTTGCAATGGCCGAACAGGTTGCTAACATTGATGTTAAAG GATGCTTTATGACAAAAGAAATGGAAAAATATATTCCCATAGTAGCATCAGCTCATGAAATGATAAGAACAGCAGCTAAA TTAGTAGATGAAGCAAGAGAATTAGAAAAAGCTACCGATAGTGTAAGCAGAAAACCACACGGAGCAGATGGAAAAAGATT AAATAAAACCAAATTAATGGAAAAACCAGAATAA
Upstream 100 bases:
>100_bases ATAATCTAATACCCCATATTAGCATATAAAATAGCAACTAATAAATATAAGTGCTATGTAATGCATATTGTAATACTACA TAAACAACAACGGTGATAAA
Downstream 100 bases:
>100_bases CCATAAAAATATATTATTTTTATTTTATATCTTTATTATTATTTTATTTTATTTTTTTGATATCCAATAATGCATCTTTT GGTGTATCTTTATCGGTTTT
Product: F420-dependent methylenetetrahydromethanopterin dehydrogenase
Products: NA
Alternate protein names: MTD; Coenzyme F420-dependent N5,N10-methylenetetrahydromethanopterin dehydrogenase
Number of amino acids: Translated: 277; Mature: 277
Protein sequence:
>277_residues MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIKPDFIIYVGPNPAAPGPAKAR EILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPMIGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDI VEAIEAGNEIELPKIVVTDAKSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE
Sequences:
>Translated_277_residues MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIKPDFIIYVGPNPAAPGPAKAR EILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPMIGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDI VEAIEAGNEIELPKIVVTDAKSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE >Mature_277_residues MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIKPDFIIYVGPNPAAPGPAKAR EILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPMIGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDI VEAIEAGNEIELPKIVVTDAKSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE
Specific function: Catalyzes the reversible reduction of methenyl- H(4)MPT(+) to methylene-H(4)MPT
COG id: COG1927
COG function: function code C; Coenzyme F420-dependent N(5),N(10)-methenyltetrahydromethanopterin dehydrogenase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the MTD family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): MTD_META3 (A6UWS1)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001325555.1 - ProteinModelPortal: A6UWS1 - SMR: A6UWS1 - STRING: A6UWS1 - GeneID: 5327444 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_1367 - eggNOG: arNOG04866 - HOGENOM: HBG538567 - OMA: IVASAHE - ProtClustDB: PRK00994 - BioCyc: MAEO419665:MAEO_1367-MONOMER - GO: GO:0015948 - HAMAP: MF_00058 - InterPro: IPR002844 - PIRSF: PIRSF005627 - ProDom: PD017604
Pfam domain/function: PF01993 MTD; SSF102324 MeTD
EC number: =1.5.99.9
Molecular weight: Translated: 29631; Mature: 29631
Theoretical pI: Translated: 5.10; Mature: 5.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 5.1 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIK CEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC PDFIIYVGPNPAAPGPAKAREILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPM CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCC IGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDIVEAIEAGNEIELPKIVVTDA CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC KSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC >Mature Secondary Structure MVVKIGIIKCGNIGMSPLIDLALDERADRTNIDVISIGSGAKMGPNQVVEVTTKMVEDIK CEEEEEEEEECCCCCCHHHHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHCC PDFIIYVGPNPAAPGPAKAREILSASDIPSVIIGDAPGIKAKDKMAEEGLGYILIKCDPM CCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCHHHHHHHCCCCEEEEEECCC IGARRQFLDPVEMAMFNADVIRVLAGTGAARVVQNAIDDIVEAIEAGNEIELPKIVVTDA CCCHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEECC KSVAAAEFSNPYAKAKAMAAFAMAEQVANIDVKGCFMTKEMEKYIPIVASAHEMIRTAAK HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHH LVDEARELEKATDSVSRKPHGADGKRLNKTKLMEKPE HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA