| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401720
Identifier: 150401720
GI number: 150401720
Start: 1358517
End: 1359095
Strand: Reverse
Name: 150401720
Synonym: Maeo_1298
Alternate gene names: NA
Gene position: 1359095-1358517 (Counterclockwise)
Preceding gene: 150401726
Following gene: 150401719
Centisome position: 86.59
GC content: 28.15
Gene sequence:
>579_bases ATGGAATTGCACAATAACATTACTAAAAATGAACTCAAAGAAAAGGACAATAAAATGAAAGAAGAAATAAATGAAGAAAT GAAAAAAACAATCATAGAATTATTTTCAAAGATTTCAAAGATTCATGGATTAAGTAAATCAGTCGGAGAAGTTTATGGAT GTATCTATGCTTCACATAATCCTCTATGTATTGATGATATAATGGAAGAATTGGGCATAAGCAGAGGGAATGTAAGCATG AATTTAAACAAACTTGAAAAATTAGGATTCATAAAAAAAGTTTGGGTAAAAGGGGAAAGAAAACAATATTATGAACCATT GTGTGGTTTCTCGTCGATATTGGACATAGTCGGACATAAACATGCCCTTTTTTTGGATGCCAGTACTAAATTAAGAGAAT TAAATGAAAAATCAAACGGAGAAAACGAATTGATACTAGATAAATTACAAAATCTTGAAAAAATGGAAAAATTGTTAAAA AAAATATTGGTGACAATTAAAGAGATAAATAAAAATAGTAATAGTGGATGTTCGAAAACTTTTTGCGAGCATAACAATGA TAACGAAAAGCCAGATTAA
Upstream 100 bases:
>100_bases TTCAAGAATCGTCCCTTGTTTGTCTTTCTTAGTCCGAAGATTAACTGTGTTGAAAAAGACCGAAGATTAACTATAAAAAA ACTGCAAAATAAGTGATAAT
Downstream 100 bases:
>100_bases TTAATGGTGATTATAACATGATTAAAAAAATGCTCAAAAAAACTGCAAAATTTTCAGAAAAAAAGCCGTATTTAACGGTT TTAATAATTATTGTATTAAC
Product: regulatory protein ArsR
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHNPLCIDDIMEELGISRGNVSM NLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHKHALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLK KILVTIKEINKNSNSGCSKTFCEHNNDNEKPD
Sequences:
>Translated_192_residues MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHNPLCIDDIMEELGISRGNVSM NLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHKHALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLK KILVTIKEINKNSNSGCSKTFCEHNNDNEKPD >Mature_192_residues MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHNPLCIDDIMEELGISRGNVSM NLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHKHALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLK KILVTIKEINKNSNSGCSKTFCEHNNDNEKPD
Specific function: Unknown
COG id: COG1510
COG function: function code K; Predicted transcriptional regulators
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001845 - InterPro: IPR011991 [H]
Pfam domain/function: PF01022 HTH_5 [H]
EC number: NA
Molecular weight: Translated: 22055; Mature: 22055
Theoretical pI: Translated: 7.50; Mature: 7.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.7 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 5.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC PLCIDDIMEELGISRGNVSMNLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHK CEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC HALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLKKILVTIKEINKNSNSGCSKT HHEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FCEHNNDNEKPD HHHCCCCCCCCC >Mature Secondary Structure MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHN CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC PLCIDDIMEELGISRGNVSMNLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHK CEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC HALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLKKILVTIKEINKNSNSGCSKT HHEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH FCEHNNDNEKPD HHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 12471609 [H]