Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150401720

Identifier: 150401720

GI number: 150401720

Start: 1358517

End: 1359095

Strand: Reverse

Name: 150401720

Synonym: Maeo_1298

Alternate gene names: NA

Gene position: 1359095-1358517 (Counterclockwise)

Preceding gene: 150401726

Following gene: 150401719

Centisome position: 86.59

GC content: 28.15

Gene sequence:

>579_bases
ATGGAATTGCACAATAACATTACTAAAAATGAACTCAAAGAAAAGGACAATAAAATGAAAGAAGAAATAAATGAAGAAAT
GAAAAAAACAATCATAGAATTATTTTCAAAGATTTCAAAGATTCATGGATTAAGTAAATCAGTCGGAGAAGTTTATGGAT
GTATCTATGCTTCACATAATCCTCTATGTATTGATGATATAATGGAAGAATTGGGCATAAGCAGAGGGAATGTAAGCATG
AATTTAAACAAACTTGAAAAATTAGGATTCATAAAAAAAGTTTGGGTAAAAGGGGAAAGAAAACAATATTATGAACCATT
GTGTGGTTTCTCGTCGATATTGGACATAGTCGGACATAAACATGCCCTTTTTTTGGATGCCAGTACTAAATTAAGAGAAT
TAAATGAAAAATCAAACGGAGAAAACGAATTGATACTAGATAAATTACAAAATCTTGAAAAAATGGAAAAATTGTTAAAA
AAAATATTGGTGACAATTAAAGAGATAAATAAAAATAGTAATAGTGGATGTTCGAAAACTTTTTGCGAGCATAACAATGA
TAACGAAAAGCCAGATTAA

Upstream 100 bases:

>100_bases
TTCAAGAATCGTCCCTTGTTTGTCTTTCTTAGTCCGAAGATTAACTGTGTTGAAAAAGACCGAAGATTAACTATAAAAAA
ACTGCAAAATAAGTGATAAT

Downstream 100 bases:

>100_bases
TTAATGGTGATTATAACATGATTAAAAAAATGCTCAAAAAAACTGCAAAATTTTCAGAAAAAAAGCCGTATTTAACGGTT
TTAATAATTATTGTATTAAC

Product: regulatory protein ArsR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 192

Protein sequence:

>192_residues
MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHNPLCIDDIMEELGISRGNVSM
NLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHKHALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLK
KILVTIKEINKNSNSGCSKTFCEHNNDNEKPD

Sequences:

>Translated_192_residues
MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHNPLCIDDIMEELGISRGNVSM
NLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHKHALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLK
KILVTIKEINKNSNSGCSKTFCEHNNDNEKPD
>Mature_192_residues
MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHNPLCIDDIMEELGISRGNVSM
NLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHKHALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLK
KILVTIKEINKNSNSGCSKTFCEHNNDNEKPD

Specific function: Unknown

COG id: COG1510

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH arsR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001845
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01022 HTH_5 [H]

EC number: NA

Molecular weight: Translated: 22055; Mature: 22055

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.6 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PLCIDDIMEELGISRGNVSMNLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHK
CEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC
HALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLKKILVTIKEINKNSNSGCSKT
HHEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FCEHNNDNEKPD
HHHCCCCCCCCC
>Mature Secondary Structure
MELHNNITKNELKEKDNKMKEEINEEMKKTIIELFSKISKIHGLSKSVGEVYGCIYASHN
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCC
PLCIDDIMEELGISRGNVSMNLNKLEKLGFIKKVWVKGERKQYYEPLCGFSSILDIVGHK
CEEHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHCCC
HALFLDASTKLRELNEKSNGENELILDKLQNLEKMEKLLKKILVTIKEINKNSNSGCSKT
HHEEECCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FCEHNNDNEKPD
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 12471609 [H]