| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is yrkI [H]
Identifier: 150401391
GI number: 150401391
Start: 989413
End: 989631
Strand: Reverse
Name: yrkI [H]
Synonym: Maeo_0967
Alternate gene names: 150401391
Gene position: 989631-989413 (Counterclockwise)
Preceding gene: 150401392
Following gene: 150401390
Centisome position: 63.05
GC content: 37.9
Gene sequence:
>219_bases ATGGCTACATTAGATGCGAGAGGATTACAATGTCCAATGCCCATTGTAGAGCTCGCTAAGAAAATGAAGGAGTTAAAGGA AGGGGAGATTTTAGAGCTCATAGCTGATGATGTTGGGGCAAAAGAAGATGTTCCAGCATGGTGTAATAGAACAGGAAATG AATTGGTTGAAATGACCGAAGAAAATGGGATTTTAGCCTTCAAAATTAAGAAAAAATAA
Upstream 100 bases:
>100_bases GATGAATGCACAGGCTGTGGAGTTTGTGAAGATGTATGTCCAACAGGGGCAGTAAAGGTTAAATTTTAACGATATTTAAT ACTAATTAAAAGGTGTAAAT
Downstream 100 bases:
>100_bases AGTCTTAATATCTATTATTATTTTCTATTTTATTTTTTTATATTTTTTTATTTACTATTTGGTGGTATTATGGCCGATAA AATGGCACTTGTGGTTTCAG
Product: SirA family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 72; Mature: 71
Protein sequence:
>72_residues MATLDARGLQCPMPIVELAKKMKELKEGEILELIADDVGAKEDVPAWCNRTGNELVEMTEENGILAFKIKKK
Sequences:
>Translated_72_residues MATLDARGLQCPMPIVELAKKMKELKEGEILELIADDVGAKEDVPAWCNRTGNELVEMTEENGILAFKIKKK >Mature_71_residues ATLDARGLQCPMPIVELAKKMKELKEGEILELIADDVGAKEDVPAWCNRTGNELVEMTEENGILAFKIKKK
Specific function: Unknown
COG id: COG0425
COG function: function code O; Predicted redox protein, regulator of disulfide bond formation
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0033 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001455 [H]
Pfam domain/function: PF01206 SirA [H]
EC number: NA
Molecular weight: Translated: 8016; Mature: 7884
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: PS01148 UPF0033
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 5.6 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 7.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATLDARGLQCPMPIVELAKKMKELKEGEILELIADDVGAKEDVPAWCNRTGNELVEMTE CCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHC ENGILAFKIKKK CCCEEEEEEECC >Mature Secondary Structure ATLDARGLQCPMPIVELAKKMKELKEGEILELIADDVGAKEDVPAWCNRTGNELVEMTE CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHC ENGILAFKIKKK CCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]