Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is yrkE [H]

Identifier: 150401390

GI number: 150401390

Start: 988927

End: 989343

Strand: Reverse

Name: yrkE [H]

Synonym: Maeo_0966

Alternate gene names: 150401390

Gene position: 989343-988927 (Counterclockwise)

Preceding gene: 150401391

Following gene: 150401389

Centisome position: 63.04

GC content: 36.69

Gene sequence:

>417_bases
ATGGCCGATAAAATGGCACTTGTGGTTTCAGAAGGCACTTTTGATAAGGCAATGATGGCTTTTATTCTTGGAACCATAGG
TGCATCCATGGGGATGGAGGTACATATTTTCTTTACATTTTTTGGACTTGAAGTATTAAAGAAGAATGCTAAGCCTAAAC
TTCCTGGAATATATAGATTATTTGGAAGTTTGGGGGTAAAGATGATGGAAAAGAAAATGAAAAAGCAGAATATTGGCGGA
TTTGAGGAATCTCGACAACAGACTATCGATTTAGGTGCTAAGCTTTATGCATGTAGCACTTCTATGAGTATAATGGGAGT
AAAAGAAGAAGATTTAATTGATGGAGTGGAAATAGTTGGAGCCACAAAATTTATAGACCTTGCAATGGATGCAAAAGTTC
AGCTTTTCATAGGGTGA

Upstream 100 bases:

>100_bases
GATTTTAGCCTTCAAAATTAAGAAAAAATAAAGTCTTAATATCTATTATTATTTTCTATTTTATTTTTTTATATTTTTTT
ATTTACTATTTGGTGGTATT

Downstream 100 bases:

>100_bases
TTTAATGACACTATTTATTCTTTTAAAATCTCCTTTTGAGTGTAATGCCATTGAAGTAATGGAAAAATTAAAAGATGGTA
ACGATGGAGTTCTTCTTGCA

Product: pyridine nucleotide-disulphide oxidoreductase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MADKMALVVSEGTFDKAMMAFILGTIGASMGMEVHIFFTFFGLEVLKKNAKPKLPGIYRLFGSLGVKMMEKKMKKQNIGG
FEESRQQTIDLGAKLYACSTSMSIMGVKEEDLIDGVEIVGATKFIDLAMDAKVQLFIG

Sequences:

>Translated_138_residues
MADKMALVVSEGTFDKAMMAFILGTIGASMGMEVHIFFTFFGLEVLKKNAKPKLPGIYRLFGSLGVKMMEKKMKKQNIGG
FEESRQQTIDLGAKLYACSTSMSIMGVKEEDLIDGVEIVGATKFIDLAMDAKVQLFIG
>Mature_137_residues
ADKMALVVSEGTFDKAMMAFILGTIGASMGMEVHIFFTFFGLEVLKKNAKPKLPGIYRLFGSLGVKMMEKKMKKQNIGGF
EESRQQTIDLGAKLYACSTSMSIMGVKEEDLIDGVEIVGATKFIDLAMDAKVQLFIG

Specific function: Unknown

COG id: COG2210

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003787 [H]

Pfam domain/function: PF02635 DrsE [H]

EC number: NA

Molecular weight: Translated: 15117; Mature: 14986

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
8.7 %Met     (Translated Protein)
9.4 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
8.0 %Met     (Mature Protein)
8.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADKMALVVSEGTFDKAMMAFILGTIGASMGMEVHIFFTFFGLEVLKKNAKPKLPGIYRL
CCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHH
FGSLGVKMMEKKMKKQNIGGFEESRQQTIDLGAKLYACSTSMSIMGVKEEDLIDGVEIVG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEECCCHHHHHCCHHHHH
ATKFIDLAMDAKVQLFIG
HHHHEEEEECCEEEEEEC
>Mature Secondary Structure 
ADKMALVVSEGTFDKAMMAFILGTIGASMGMEVHIFFTFFGLEVLKKNAKPKLPGIYRL
CCCEEEEEECCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCCHHHHH
FGSLGVKMMEKKMKKQNIGGFEESRQQTIDLGAKLYACSTSMSIMGVKEEDLIDGVEIVG
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCEEEEECCCCEEECCCHHHHHCCHHHHH
ATKFIDLAMDAKVQLFIG
HHHHEEEEECCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]