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The map label for this gene is hycD [H]

Identifier: 150401367

GI number: 150401367

Start: 964943

End: 965857

Strand: Reverse

Name: hycD [H]

Synonym: Maeo_0942

Alternate gene names: 150401367

Gene position: 965857-964943 (Counterclockwise)

Preceding gene: 150401368

Following gene: 150401366

Centisome position: 61.54

GC content: 32.57

Gene sequence:

>915_bases
ATGGAATCTATAATATATTATTTACTTACGGTTTCACTTGCTCCGCTGTTTCCTGGTGTGATTGATAAAGTAAAGGCATT
ATCTGCGGGTAAAAAAGGACCTTCTGTATTTATAAAATATTATGATTTAATAAGATTCTTAAAAAAAGGACTGGTATACA
GTAAAAACACAACCTGGGTATTTAGATTTGCACCCTTAATTATATCCAGCATATATTTATTGGCTCTCCTATTTTTTCCA
ATCGCAGGAGAAAAACCAGTAATTTCATTTGCATATGATTTTATTATGGTGGTGTATTTATTTGCTTTAAGTAGATTCTT
TCTACTTCTTAGCTCATTAAACACGGCTTCTTCATTTGAAGGAATGGGCGCTAGTAGAGAGGCATTTATGTCATTTTTGG
CAGAAGGCTCTTTATTTATGACATTCATATTGGTGATAAAACTTACAGGAGCTCCCAGTCTGTTGGACATGTTGGGTAGT
GTAGGGGCTCAAACATTATGGAATCAAGCGGGAATATTTGCCATAATATCAATAATTGTATTATTTATGGTATTAATTGT
GGAAAATGCAAGAAAACCAATAGATGACCCAGATACACATTTAGAATTAACTATGATTCACGAAGTAATGATATTAGATA
ATAGTGGTCCTGATTTGGGATTAATGGAATTAGGAACATTTTTAAAATTCCTATTCTTTAGTGGAATACTTTCAAGATTA
ATATTTCCCGTGGATTTTGGAATTGGGGCTTTAAATTATTTGGCATTTATAATTGGAATATTTGTAATAGCTTTTGCCGT
AGGAATTATGGAATCTATCAGAGTTAGATATAAACTTCCTAGAAATACATCTTTCCTAATGTCATCATTCGCCTTAGCTA
CACTTGCACTAATATTCTCTATCGGGGTGAGGTAA

Upstream 100 bases:

>100_bases
AGATATCTTAAAGATGGAAACTTTAACTATTATATGGGATATGTGATTATAATCATATCGCTTCTCCTATCATATATTTA
TTTAATAATGTGGTGGTAAG

Downstream 100 bases:

>100_bases
TGATTGAAATATTATATTATGAAAAATTAATTATTGCAGCCATAATCGGAACCGTATTGTTGACCTTGAATACACACAGA
TTATTTTCACTTGTTAAAAC

Product: hydrogenase, component C-formate hydrogenlyase subunit 4-like protein

Products: NA

Alternate protein names: FHL subunit 4; Hydrogenase 3 component D [H]

Number of amino acids: Translated: 304; Mature: 304

Protein sequence:

>304_residues
MESIIYYLLTVSLAPLFPGVIDKVKALSAGKKGPSVFIKYYDLIRFLKKGLVYSKNTTWVFRFAPLIISSIYLLALLFFP
IAGEKPVISFAYDFIMVVYLFALSRFFLLLSSLNTASSFEGMGASREAFMSFLAEGSLFMTFILVIKLTGAPSLLDMLGS
VGAQTLWNQAGIFAIISIIVLFMVLIVENARKPIDDPDTHLELTMIHEVMILDNSGPDLGLMELGTFLKFLFFSGILSRL
IFPVDFGIGALNYLAFIIGIFVIAFAVGIMESIRVRYKLPRNTSFLMSSFALATLALIFSIGVR

Sequences:

>Translated_304_residues
MESIIYYLLTVSLAPLFPGVIDKVKALSAGKKGPSVFIKYYDLIRFLKKGLVYSKNTTWVFRFAPLIISSIYLLALLFFP
IAGEKPVISFAYDFIMVVYLFALSRFFLLLSSLNTASSFEGMGASREAFMSFLAEGSLFMTFILVIKLTGAPSLLDMLGS
VGAQTLWNQAGIFAIISIIVLFMVLIVENARKPIDDPDTHLELTMIHEVMILDNSGPDLGLMELGTFLKFLFFSGILSRL
IFPVDFGIGALNYLAFIIGIFVIAFAVGIMESIRVRYKLPRNTSFLMSSFALATLALIFSIGVR
>Mature_304_residues
MESIIYYLLTVSLAPLFPGVIDKVKALSAGKKGPSVFIKYYDLIRFLKKGLVYSKNTTWVFRFAPLIISSIYLLALLFFP
IAGEKPVISFAYDFIMVVYLFALSRFFLLLSSLNTASSFEGMGASREAFMSFLAEGSLFMTFILVIKLTGAPSLLDMLGS
VGAQTLWNQAGIFAIISIIVLFMVLIVENARKPIDDPDTHLELTMIHEVMILDNSGPDLGLMELGTFLKFLFFSGILSRL
IFPVDFGIGALNYLAFIIGIFVIAFAVGIMESIRVRYKLPRNTSFLMSSFALATLALIFSIGVR

Specific function: Hydrogen metabolism; FHL pathway. [C]

COG id: COG0650

COG function: function code C; Formate hydrogenlyase subunit 4

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I subunit 1 family [H]

Homologues:

Organism=Escherichia coli, GI1789077, Length=228, Percent_Identity=27.6315789473684, Blast_Score=94, Evalue=8e-21,
Organism=Escherichia coli, GI87082115, Length=307, Percent_Identity=28.9902280130293, Blast_Score=83, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001694
- InterPro:   IPR018086 [H]

Pfam domain/function: PF00146 NADHdh [H]

EC number: NA

Molecular weight: Translated: 33715; Mature: 33715

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MESIIYYLLTVSLAPLFPGVIDKVKALSAGKKGPSVFIKYYDLIRFLKKGLVYSKNTTWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCH
FRFAPLIISSIYLLALLFFPIAGEKPVISFAYDFIMVVYLFALSRFFLLLSSLNTASSFE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
GMGASREAFMSFLAEGSLFMTFILVIKLTGAPSLLDMLGSVGAQTLWNQAGIFAIISIIV
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LFMVLIVENARKPIDDPDTHLELTMIHEVMILDNSGPDLGLMELGTFLKFLFFSGILSRL
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IFPVDFGIGALNYLAFIIGIFVIAFAVGIMESIRVRYKLPRNTSFLMSSFALATLALIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IGVR
HCCC
>Mature Secondary Structure
MESIIYYLLTVSLAPLFPGVIDKVKALSAGKKGPSVFIKYYDLIRFLKKGLVYSKNTTWV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCEECCCCCCH
FRFAPLIISSIYLLALLFFPIAGEKPVISFAYDFIMVVYLFALSRFFLLLSSLNTASSFE
HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHC
GMGASREAFMSFLAEGSLFMTFILVIKLTGAPSLLDMLGSVGAQTLWNQAGIFAIISIIV
CCCCCHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
LFMVLIVENARKPIDDPDTHLELTMIHEVMILDNSGPDLGLMELGTFLKFLFFSGILSRL
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHHHHHHHHH
IFPVDFGIGALNYLAFIIGIFVIAFAVGIMESIRVRYKLPRNTSFLMSSFALATLALIFS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH
IGVR
HCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2187144; 9278503 [H]