Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is yhbZ [C]

Identifier: 150401299

GI number: 150401299

Start: 897593

End: 898696

Strand: Reverse

Name: yhbZ [C]

Synonym: Maeo_0871

Alternate gene names: 150401299

Gene position: 898696-897593 (Counterclockwise)

Preceding gene: 150401300

Following gene: 150401298

Centisome position: 57.26

GC content: 36.05

Gene sequence:

>1104_bases
ATGGGAATTCAGGAAGATATTAGGCATATAGAGGAAGAATTAAAGAAAACACAATATAACAAGGCAACTCAAAAGCATGT
TGGGATATTGAAGGCGAAACTTGCAAAATTAAGAGATGCTCAAAGTGCTCCAAAATCAGGGAGCTCCGGGCCCTCTTATG
CTGTGAGAAAAACAGGAGATGCCACAGTGGCATTTGTTGGATTTCCATCTGTGGGAAAATCTACGCTGTTAAATACCATT
ACAAATGCTAATTCAGAAGTTGGAGCTTATGCCTTTACCACACTTACAATTATCCCGGGATTATTGGAATATAAAGGGGC
AAAAATTCAAGTATTGGATGCACCGGGAATTATTACGGGGGCATCTTTTGGTAGGGGAAGAGGTAGCGAGGTTTTAGCAG
CAATTAGGAGCGTAGATTTGGCCATGATTGTTGTTGATGTATTTTCTCCGGAACATATTCCGGTAATCGAGAGAGAATTA
TATAATGTAGGTATAAGATTAGACCAAAATCCACCCGATGTAAAAATTGTAAAAAAGGACAGGGGCGGAGTTAATATCAA
TACAACAATTCCACTTACCAAAATAGACGAAGATACAATTAAAGCCATACTTAACGAACACAAAATACACAATGCAGACC
TTGTAATAAGGGATGACATCACAGCAGACCAGTTTATTGATGTAGTTAGTGGAAATAGAGAATATATTCCATCACTTGTG
ATAGTAAATAAAATAGATTTGGCAGAGCCCGAACATATAGAAAAAATTGAAGAAGTTTTAAAAGATAGGGCACATATTTT
AGTATCAGGTTATAAAAATATTAATATTGAAGAATTAAAAGACCAGATTTTTAATACTCTTGGATTTATGAAGCTTTATT
TGAGGCCCCAAGGTGGAAAGGCTGATATGAAAGACCCGTTAATAGTTTTAAAGAACTCCACCGTAGAAGATGTATGTAAT
AGATTGCATCGGGATTTTGTAAAGAATTTCAGATATGCTCAAATTTGGGGAAAATCGGCAAAACACCCCGGGCAAAGAGT
GGGACTTAATCATGTGTTGGAAGATGAAGATATACTAACAATTGTTATTAAAAGAACTAATTAA

Upstream 100 bases:

>100_bases
TTCGCTCACTCCGATAAATCTAATTTTTATATTGTGCGTATATATTATTATATATTATAATCATACAAAATTTACATAAT
TATTTATTTGGTGAAATTAA

Downstream 100 bases:

>100_bases
AATAATAAATAAAAATATAGGAGCTCCTTGGAGCTCCAATTAATTTTAATGATGATAAAATGACCAATGAAGAAATATAT
AATAAATTAAAAAAAGCTGG

Product: small GTP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 367; Mature: 366

Protein sequence:

>367_residues
MGIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGDATVAFVGFPSVGKSTLLNTI
TNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITGASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIEREL
YNVGIRLDQNPPDVKIVKKDRGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV
IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGKADMKDPLIVLKNSTVEDVCN
RLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILTIVIKRTN

Sequences:

>Translated_367_residues
MGIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGDATVAFVGFPSVGKSTLLNTI
TNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITGASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIEREL
YNVGIRLDQNPPDVKIVKKDRGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV
IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGKADMKDPLIVLKNSTVEDVCN
RLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILTIVIKRTN
>Mature_366_residues
GIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGDATVAFVGFPSVGKSTLLNTIT
NANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITGASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIERELY
NVGIRLDQNPPDVKIVKKDRGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLVI
VNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGKADMKDPLIVLKNSTVEDVCNR
LHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILTIVIKRTN

Specific function: Unknown

COG id: COG1163

COG function: function code R; Predicted GTPase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 G (guanine nucleotide-binding) domain [H]

Homologues:

Organism=Homo sapiens, GI4758796, Length=363, Percent_Identity=47.6584022038567, Blast_Score=340, Evalue=1e-93,
Organism=Homo sapiens, GI4557537, Length=367, Percent_Identity=44.6866485013624, Blast_Score=328, Evalue=5e-90,
Organism=Homo sapiens, GI24308117, Length=111, Percent_Identity=41.4414414414414, Blast_Score=75, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI71981008, Length=369, Percent_Identity=44.7154471544715, Blast_Score=327, Evalue=7e-90,
Organism=Caenorhabditis elegans, GI17555344, Length=368, Percent_Identity=44.2934782608696, Blast_Score=325, Evalue=3e-89,
Organism=Saccharomyces cerevisiae, GI6321612, Length=371, Percent_Identity=43.3962264150943, Blast_Score=315, Evalue=7e-87,
Organism=Saccharomyces cerevisiae, GI6319281, Length=367, Percent_Identity=44.6866485013624, Blast_Score=313, Evalue=3e-86,
Organism=Drosophila melanogaster, GI17981711, Length=368, Percent_Identity=47.2826086956522, Blast_Score=340, Evalue=8e-94,
Organism=Drosophila melanogaster, GI21356473, Length=366, Percent_Identity=44.8087431693989, Blast_Score=332, Evalue=3e-91,
Organism=Drosophila melanogaster, GI20129375, Length=142, Percent_Identity=33.8028169014084, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI24585318, Length=97, Percent_Identity=42.2680412371134, Blast_Score=74, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006074
- InterPro:   IPR006073
- InterPro:   IPR002917
- InterPro:   IPR005225
- InterPro:   IPR004095 [H]

Pfam domain/function: PF01926 MMR_HSR1; PF02824 TGS [H]

EC number: NA

Molecular weight: Translated: 40681; Mature: 40550

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
ATVAFVGFPSVGKSTLLNTITNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITG
EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEC
ASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIERELYNVGIRLDQNPPDVKIVKKD
CCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEC
RGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV
CCCEEEEEEECEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCHHHCCEEE
IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGK
EEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCC
ADMKDPLIVLKNSTVEDVCNRLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILT
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCHHHCCCCCEEE
IVIKRTN
EEEEECC
>Mature Secondary Structure 
GIQEDIRHIEEELKKTQYNKATQKHVGILKAKLAKLRDAQSAPKSGSSGPSYAVRKTGD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCC
ATVAFVGFPSVGKSTLLNTITNANSEVGAYAFTTLTIIPGLLEYKGAKIQVLDAPGIITG
EEEEEEECCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCCEEEC
ASFGRGRGSEVLAAIRSVDLAMIVVDVFSPEHIPVIERELYNVGIRLDQNPPDVKIVKKD
CCCCCCCCHHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHHCCEEECCCCCCEEEEEEC
RGGVNINTTIPLTKIDEDTIKAILNEHKIHNADLVIRDDITADQFIDVVSGNREYIPSLV
CCCEEEEEEECEEECCHHHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHCCCHHHCCEEE
IVNKIDLAEPEHIEKIEEVLKDRAHILVSGYKNINIEELKDQIFNTLGFMKLYLRPQGGK
EEEECCCCCCHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHEEEEEECCCCC
ADMKDPLIVLKNSTVEDVCNRLHRDFVKNFRYAQIWGKSAKHPGQRVGLNHVLEDEDILT
CCCCCCEEEEECCCHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHCCCHHHCCCCCEEE
IVIKRTN
EEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]