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The map label for this gene is ptr2 [H]

Identifier: 150401293

GI number: 150401293

Start: 893390

End: 893812

Strand: Reverse

Name: ptr2 [H]

Synonym: Maeo_0865

Alternate gene names: 150401293

Gene position: 893812-893390 (Counterclockwise)

Preceding gene: 150401295

Following gene: 150401289

Centisome position: 56.95

GC content: 29.79

Gene sequence:

>423_bases
ATGGACGAAAAAGATACAAAAATATTAAAAATATTAATGGAAGAAGGTAGAAAGCCATTTACGGAAATAGCCAAAGAATT
GAATACTAGTGAGAGCTCCATAAGAAAAAGAATAAAAAAAATGGAATCTTGTGGAATTATCAAAGGATATAATGTGATAG
TTGAACCAAATAAAATTGGATATGGTGTAGTTGCATTAACTGGTTTCGACACTATTCCCGAGGATTTTTTACATGTGGCA
AATGAATTATGTAAATATGAAGAAGTTAAAAAAGTATATACTACCACAGGAGACCATATGATAATGACTGAAATATGGGC
AAAGGATGGAAGAGAATTGTCCGAAATAATATTTAATAAAATTGGAAGAATTGAGGGTATAAAAAAAGTATGTCCTGCCA
TAATATTGGAGCAAATGAAATAA

Upstream 100 bases:

>100_bases
ACTTCTATTGTCATTTTAACACCCATATTTATATATTATATATTAGATATTATAATACCTACGAATAACATATATATAAT
TTACGAATAATTGTGATATT

Downstream 100 bases:

>100_bases
TAAAATATATGATGGGAGCTCCCAAAAATTATTTAGTCAATCTTCGGTCTTTTTCATGAATTTATCTAATATAATTATTG
AAGATTAATTATAAATTTCC

Product: AsnC family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDEKDTKILKILMEEGRKPFTEIAKELNTSESSIRKRIKKMESCGIIKGYNVIVEPNKIGYGVVALTGFDTIPEDFLHVA
NELCKYEEVKKVYTTTGDHMIMTEIWAKDGRELSEIIFNKIGRIEGIKKVCPAIILEQMK

Sequences:

>Translated_140_residues
MDEKDTKILKILMEEGRKPFTEIAKELNTSESSIRKRIKKMESCGIIKGYNVIVEPNKIGYGVVALTGFDTIPEDFLHVA
NELCKYEEVKKVYTTTGDHMIMTEIWAKDGRELSEIIFNKIGRIEGIKKVCPAIILEQMK
>Mature_140_residues
MDEKDTKILKILMEEGRKPFTEIAKELNTSESSIRKRIKKMESCGIIKGYNVIVEPNKIGYGVVALTGFDTIPEDFLHVA
NELCKYEEVKKVYTTTGDHMIMTEIWAKDGRELSEIIFNKIGRIEGIKKVCPAIILEQMK

Specific function: Participates in positive as well as negative regulation of transcription. Binds to its own promoter [H]

COG id: COG1522

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH asnC-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790182, Length=138, Percent_Identity=30.4347826086957, Blast_Score=71, Evalue=2e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011008
- InterPro:   IPR013196
- InterPro:   IPR000485
- InterPro:   IPR019885
- InterPro:   IPR019888
- InterPro:   IPR019887
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01037 AsnC_trans_reg; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 15997; Mature: 15997

Theoretical pI: Translated: 7.35; Mature: 7.35

Prosite motif: PS00519 HTH_ASNC_1 ; PS50956 HTH_ASNC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDEKDTKILKILMEEGRKPFTEIAKELNTSESSIRKRIKKMESCGIIKGYNVIVEPNKIG
CCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
YGVVALTGFDTIPEDFLHVANELCKYEEVKKVYTTTGDHMIMTEIWAKDGRELSEIIFNK
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH
IGRIEGIKKVCPAIILEQMK
HHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDEKDTKILKILMEEGRKPFTEIAKELNTSESSIRKRIKKMESCGIIKGYNVIVEPNKIG
CCCHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCCCC
YGVVALTGFDTIPEDFLHVANELCKYEEVKKVYTTTGDHMIMTEIWAKDGRELSEIIFNK
CEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH
IGRIEGIKKVCPAIILEQMK
HHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087; 11226165 [H]