| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
Click here to switch to the map view.
The map label for this gene is 150401288
Identifier: 150401288
GI number: 150401288
Start: 888000
End: 888578
Strand: Reverse
Name: 150401288
Synonym: Maeo_0860
Alternate gene names: NA
Gene position: 888578-888000 (Counterclockwise)
Preceding gene: 150401289
Following gene: 150401286
Centisome position: 56.62
GC content: 31.43
Gene sequence:
>579_bases ATGAAAGAGGATTTAAAGAATACAATAGAATTTCATGGTCATTTTTGCCCTGGTTTAGCTATGGGGTATAGGGTGGCAAA ATATGTTCAAAATCACTATAAAAAATCGGAGGACGAGGAGCTTGTAGCTATTGTATATAATAATTCATGTAGTGTTGATG CAATTCAATATTTACTTGGATGCACCTTTGGGAAGGGAAATTTAATATTTAAAGACTATGGAAAGCCCGTTTATGTATTT TATTCAAGAGAGCATAAAAAAGGTATTAGAGTTTCATTTAAAGATGAAATAACTAATGAAATGAATAATATGTGGGATAA ATTAAGCAAGGTTTCAGACAAAGAAAGAATAAAGCTTATGGATGAATTAAAAGGCAAATGCGCTGAAAAAATATTAAACT TATTTGATGGGGAGCTCCTAAATATTGAGGAAGTGGATATTCCAGAACCTGAAAAAGCTAAAATATATCCTTCACTTAAA TGTGATGAGTGTGGGGAGTATTTTATGGAAATTAAGGGGAGATTAATCGACGGAAAGGTTGTATGCATGGAATGCTTTGA GAAATTAATGAATAAATAA
Upstream 100 bases:
>100_bases TTTTAGAATAATAATTCATATAAATAAGGGCAATATGAGATTATGGGGTATATAACAACCTATCTATCGATTTACTAAAC AAAAAGAAAATGGTGAATAT
Downstream 100 bases:
>100_bases ATTATTGAATATTTATTAAATTATCTATTTTTTTACTTATTTCTTTATTTTCCAACGATTTTAAACGAATTTTTACAGTT TTTGAATTTCCCAAAGCTGA
Product: formylmethanofuran dehydrogenase subunit E region
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 192; Mature: 192
Protein sequence:
>192_residues MKEDLKNTIEFHGHFCPGLAMGYRVAKYVQNHYKKSEDEELVAIVYNNSCSVDAIQYLLGCTFGKGNLIFKDYGKPVYVF YSREHKKGIRVSFKDEITNEMNNMWDKLSKVSDKERIKLMDELKGKCAEKILNLFDGELLNIEEVDIPEPEKAKIYPSLK CDECGEYFMEIKGRLIDGKVVCMECFEKLMNK
Sequences:
>Translated_192_residues MKEDLKNTIEFHGHFCPGLAMGYRVAKYVQNHYKKSEDEELVAIVYNNSCSVDAIQYLLGCTFGKGNLIFKDYGKPVYVF YSREHKKGIRVSFKDEITNEMNNMWDKLSKVSDKERIKLMDELKGKCAEKILNLFDGELLNIEEVDIPEPEKAKIYPSLK CDECGEYFMEIKGRLIDGKVVCMECFEKLMNK >Mature_192_residues MKEDLKNTIEFHGHFCPGLAMGYRVAKYVQNHYKKSEDEELVAIVYNNSCSVDAIQYLLGCTFGKGNLIFKDYGKPVYVF YSREHKKGIRVSFKDEITNEMNNMWDKLSKVSDKERIKLMDELKGKCAEKILNLFDGELLNIEEVDIPEPEKAKIYPSLK CDECGEYFMEIKGRLIDGKVVCMECFEKLMNK
Specific function: Unknown
COG id: COG2191
COG function: function code C; Formylmethanofuran dehydrogenase subunit E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0066 (virR) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003814 - InterPro: IPR018316 - InterPro: IPR001378 [H]
Pfam domain/function: PF02663 FwdE; PF01980 UPF0066 [H]
EC number: NA
Molecular weight: Translated: 22298; Mature: 22298
Theoretical pI: Translated: 6.14; Mature: 6.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 8.3 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKEDLKNTIEFHGHFCPGLAMGYRVAKYVQNHYKKSEDEELVAIVYNNSCSVDAIQYLLG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHH CTFGKGNLIFKDYGKPVYVFYSREHKKGIRVSFKDEITNEMNNMWDKLSKVSDKERIKLM CCCCCCCEEEEECCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHH DELKGKCAEKILNLFDGELLNIEEVDIPEPEKAKIYPSLKCDECGEYFMEIKGRLIDGKV HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCH VCMECFEKLMNK HHHHHHHHHHCC >Mature Secondary Structure MKEDLKNTIEFHGHFCPGLAMGYRVAKYVQNHYKKSEDEELVAIVYNNSCSVDAIQYLLG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHH CTFGKGNLIFKDYGKPVYVFYSREHKKGIRVSFKDEITNEMNNMWDKLSKVSDKERIKLM CCCCCCCEEEEECCCEEEEEEECCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCHHHHHHH DELKGKCAEKILNLFDGELLNIEEVDIPEPEKAKIYPSLKCDECGEYFMEIKGRLIDGKV HHHHHHHHHHHHHHHCCCCCCEECCCCCCCCCCEECCCCCHHHHHHHHHHHCCCCCCCCH VCMECFEKLMNK HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]