| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yafE [C]
Identifier: 150401268
GI number: 150401268
Start: 868368
End: 869000
Strand: Reverse
Name: yafE [C]
Synonym: Maeo_0840
Alternate gene names: 150401268
Gene position: 869000-868368 (Counterclockwise)
Preceding gene: 150401271
Following gene: 150401266
Centisome position: 55.37
GC content: 27.96
Gene sequence:
>633_bases ATGGGGGAACAAAACAATAATTATTTATTAAATTCTTCTTCATTCGATAACTATGCCAAAGAATATGATAGCTGGTATGA CGAAAATAAAGAGATATATAAATTAGAAGTTAAGGCAATAAAAAAATACATTCCAAAATCGGAAAAAGAAAATGAAAAAG AAATAGGTTTAGAAATCGGAGTGGGAACCGGGAGATTTGCAGGAGTATTTGGTATTAAATATGGGTTAGAGCCTTCAAAA TCAATGGCAGATATTGCAAAGTATAGGGGTATAAAAATATATATTGGTGTTGCCGAGGAGCTCCCTTTTGACAATAATTT TTTTGATTATATATTAATGACCACAACGATATGTTTTTTAAATAATCCCATTAAAGCACTTGGGGAAATAAAAAGAGTTT TGAAGCCAAATGGTAGGCTTATTATTGGTTTTATTGATAAAGATAGTTTATTTGGAAGATTTTACGAATCCAAAAAAGAC AATAGTAAATTTTATAAAAATGCTAAATTTTATTCATTAAATGATGTTTTAAACATGCTAAATAAACTAAACTATAAAAA TATTATTTATGAGAAAGTTAAACTTAAAAATAACGACGATGGAAGCTTTGTTGTGGTGTGCGCGGAAATATAA
Upstream 100 bases:
>100_bases CATTAATCAAAATACCACCATTTTATATGGTATTATATAATGAATATATAAGAAACATAACTATTAATATCTTATTTTAT GATTAAATAACTGGTGGATT
Downstream 100 bases:
>100_bases AATAAAGATATATCATTTTATTATTCATTGTTCCATACCTATTTTAATATCTATTATCGGCGTATTTTCAAAGGCATCAA TTTTATCAATGTATATTTTA
Product: methyltransferase type 11
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 210; Mature: 209
Protein sequence:
>210_residues MGEQNNNYLLNSSSFDNYAKEYDSWYDENKEIYKLEVKAIKKYIPKSEKENEKEIGLEIGVGTGRFAGVFGIKYGLEPSK SMADIAKYRGIKIYIGVAEELPFDNNFFDYILMTTTICFLNNPIKALGEIKRVLKPNGRLIIGFIDKDSLFGRFYESKKD NSKFYKNAKFYSLNDVLNMLNKLNYKNIIYEKVKLKNNDDGSFVVVCAEI
Sequences:
>Translated_210_residues MGEQNNNYLLNSSSFDNYAKEYDSWYDENKEIYKLEVKAIKKYIPKSEKENEKEIGLEIGVGTGRFAGVFGIKYGLEPSK SMADIAKYRGIKIYIGVAEELPFDNNFFDYILMTTTICFLNNPIKALGEIKRVLKPNGRLIIGFIDKDSLFGRFYESKKD NSKFYKNAKFYSLNDVLNMLNKLNYKNIIYEKVKLKNNDDGSFVVVCAEI >Mature_209_residues GEQNNNYLLNSSSFDNYAKEYDSWYDENKEIYKLEVKAIKKYIPKSEKENEKEIGLEIGVGTGRFAGVFGIKYGLEPSKS MADIAKYRGIKIYIGVAEELPFDNNFFDYILMTTTICFLNNPIKALGEIKRVLKPNGRLIIGFIDKDSLFGRFYESKKDN SKFYKNAKFYSLNDVLNMLNKLNYKNIIYEKVKLKNNDDGSFVVVCAEI
Specific function: Unknown
COG id: COG0500
COG function: function code QR; SAM-dependent methyltransferases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0638 and MJ1252 and M.tuberculosis Rv2003c [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: NA
Molecular weight: Translated: 24247; Mature: 24116
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGEQNNNYLLNSSSFDNYAKEYDSWYDENKEIYKLEVKAIKKYIPKSEKENEKEIGLEIG CCCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCHHHCCEEEE VGTGRFAGVFGIKYGLEPSKSMADIAKYRGIKIYIGVAEELPFDNNFFDYILMTTTICFL CCCCCHHEEEEEEECCCCCHHHHHHHHHCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHH NNPIKALGEIKRVLKPNGRLIIGFIDKDSLFGRFYESKKDNSKFYKNAKFYSLNDVLNML CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHCCCEEEHHHHHHHH NKLNYKNIIYEKVKLKNNDDGSFVVVCAEI HHCCHHHHHEEEEEECCCCCCCEEEEEECC >Mature Secondary Structure GEQNNNYLLNSSSFDNYAKEYDSWYDENKEIYKLEVKAIKKYIPKSEKENEKEIGLEIG CCCCCCEEEECCCCHHHHHHHHHHHCCCCEEEEEHHHHHHHHCCCCCCCCHHHCCEEEE VGTGRFAGVFGIKYGLEPSKSMADIAKYRGIKIYIGVAEELPFDNNFFDYILMTTTICFL CCCCCHHEEEEEEECCCCCHHHHHHHHHCCEEEEEEEHHHCCCCCCHHHHHHHHHHHHHH NNPIKALGEIKRVLKPNGRLIIGFIDKDSLFGRFYESKKDNSKFYKNAKFYSLNDVLNML CCHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHCCCCCCHHHHCCCEEEHHHHHHHH NKLNYKNIIYEKVKLKNNDDGSFVVVCAEI HHCCHHHHHEEEEEECCCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]