| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is yggV [C]
Identifier: 150401265
GI number: 150401265
Start: 866501
End: 867082
Strand: Direct
Name: yggV [C]
Synonym: Maeo_0837
Alternate gene names: 150401265
Gene position: 866501-867082 (Clockwise)
Preceding gene: 150401264
Following gene: 150401267
Centisome position: 55.21
GC content: 26.63
Gene sequence:
>582_bases ATGAAAATTTATTTCGCAACTGGAAATCAGCACAAAATTAAAGAAGCAAATATTATACTACAAGATTTAAAAAATAAAAA TATATCTATCGAACAGATAACGATGCCATATCCTGAAATTCAAGGGACATTGGAAGAAGTTTCGATATTTGGAGCAAAAT ATATTTATGATACCATAAAAAAACCGATAATTGTAGAGGATAGTGGATTTTTTGTAGATTCACTTAATGGTTTTCCTTCA ACATATTCAAAATTTGTGCAAGAAACCATTGGAAATAAAGGAATTTTAAAGCTATTGGAAGATAAAAATAACGAAAAAAA TGAAAACAATAGAAGTGCATATTTTAAAACAGTTATTGGATATTGTGATGAAAATGGAATTAAATTATTCCGGGGAATTG TAAAAGGAAAGGTATCTAATGAAATAAAAAGTAAAGGTTATGGATTTGCATATGATAGTATTTTTATCCCCGATGGAGAA AATAGAACATTTGCAGAAATGAAAACAGAGGAAAAAAGCAATATTTCCCATAGAAAAAAAGCATTTGAGGAATTTAAAAA ATTTTTAAATGATGTATTTTGA
Upstream 100 bases:
>100_bases GAATTGGAGAAGAGACGGCACATCAGCCCAATGAACATATAAAACTTAATGATTTAATAAAAATGGCTAAAATATATTAT GAAATTATGGAGGGATTTAA
Downstream 100 bases:
>100_bases AACTAATTATTTATACTATTTAATATATTAATTTTTTTCCATTTCCAACCGTTATTGGTATAATTTATTTCAAATATATC TCCTTCATTAATTTTATAGC
Product: putative deoxyribonucleotide triphosphate pyrophosphatase
Products: NA
Alternate protein names: Nucleoside triphosphate phosphohydrolase; NTPase [H]
Number of amino acids: Translated: 193; Mature: 193
Protein sequence:
>193_residues MKIYFATGNQHKIKEANIILQDLKNKNISIEQITMPYPEIQGTLEEVSIFGAKYIYDTIKKPIIVEDSGFFVDSLNGFPS TYSKFVQETIGNKGILKLLEDKNNEKNENNRSAYFKTVIGYCDENGIKLFRGIVKGKVSNEIKSKGYGFAYDSIFIPDGE NRTFAEMKTEEKSNISHRKKAFEEFKKFLNDVF
Sequences:
>Translated_193_residues MKIYFATGNQHKIKEANIILQDLKNKNISIEQITMPYPEIQGTLEEVSIFGAKYIYDTIKKPIIVEDSGFFVDSLNGFPS TYSKFVQETIGNKGILKLLEDKNNEKNENNRSAYFKTVIGYCDENGIKLFRGIVKGKVSNEIKSKGYGFAYDSIFIPDGE NRTFAEMKTEEKSNISHRKKAFEEFKKFLNDVF >Mature_193_residues MKIYFATGNQHKIKEANIILQDLKNKNISIEQITMPYPEIQGTLEEVSIFGAKYIYDTIKKPIIVEDSGFFVDSLNGFPS TYSKFVQETIGNKGILKLLEDKNNEKNENNRSAYFKTVIGYCDENGIKLFRGIVKGKVSNEIKSKGYGFAYDSIFIPDGE NRTFAEMKTEEKSNISHRKKAFEEFKKFLNDVF
Specific function: Hydrolyzes non-standard nucleotides such as XTP and ITP to nucleotide monophosphate and pyrophosphate. Probably excludes non-standard purines from DNA precursor pool, preventing thus incorporation into DNA and avoiding chromosomal lesions [H]
COG id: COG0127
COG function: function code F; Xanthosine triphosphate pyrophosphatase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAM1 NTPase family [H]
Homologues:
Organism=Homo sapiens, GI15626999, Length=194, Percent_Identity=29.3814432989691, Blast_Score=94, Evalue=1e-19, Organism=Homo sapiens, GI31657144, Length=183, Percent_Identity=27.3224043715847, Blast_Score=83, Evalue=2e-16, Organism=Escherichia coli, GI1789324, Length=198, Percent_Identity=31.8181818181818, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17556833, Length=193, Percent_Identity=27.979274611399, Blast_Score=86, Evalue=8e-18, Organism=Saccharomyces cerevisiae, GI6322529, Length=197, Percent_Identity=36.0406091370558, Blast_Score=99, Evalue=5e-22, Organism=Drosophila melanogaster, GI19920712, Length=187, Percent_Identity=30.4812834224599, Blast_Score=96, Evalue=1e-20,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002637 - InterPro: IPR020922 [H]
Pfam domain/function: PF01725 Ham1p_like [H]
EC number: =3.6.1.15 [H]
Molecular weight: Translated: 22159; Mature: 22159
Theoretical pI: Translated: 8.82; Mature: 8.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIYFATGNQHKIKEANIILQDLKNKNISIEQITMPYPEIQGTLEEVSIFGAKYIYDTIK CEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC KPIIVEDSGFFVDSLNGFPSTYSKFVQETIGNKGILKLLEDKNNEKNENNRSAYFKTVIG CCEEEECCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH YCDENGIKLFRGIVKGKVSNEIKSKGYGFAYDSIFIPDGENRTFAEMKTEEKSNISHRKK HCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECEEEECCCCCCCHHHHHHHHHHHHHHHHH AFEEFKKFLNDVF HHHHHHHHHHHCC >Mature Secondary Structure MKIYFATGNQHKIKEANIILQDLKNKNISIEQITMPYPEIQGTLEEVSIFGAKYIYDTIK CEEEEECCCCCCHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHC KPIIVEDSGFFVDSLNGFPSTYSKFVQETIGNKGILKLLEDKNNEKNENNRSAYFKTVIG CCEEEECCCCEEECCCCCCHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCHHHHHHHHHH YCDENGIKLFRGIVKGKVSNEIKSKGYGFAYDSIFIPDGENRTFAEMKTEEKSNISHRKK HCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECEEEECCCCCCCHHHHHHHHHHHHHHHHH AFEEFKKFLNDVF HHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087; 10404228 [H]