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The map label for this gene is rpl30e [H]

Identifier: 150401216

GI number: 150401216

Start: 810719

End: 811042

Strand: Reverse

Name: rpl30e [H]

Synonym: Maeo_0787

Alternate gene names: 150401216

Gene position: 811042-810719 (Counterclockwise)

Preceding gene: 150401217

Following gene: 150401215

Centisome position: 51.68

GC content: 33.02

Gene sequence:

>324_bases
ATGGATATAAATAGGTCTATAAGGGTAGCAGTAGATACCGGTAGCGTAGTATTGGGGACAAAAAAAGTCCTAAAAAACAT
AAAACATGGCGAAGGAAAACTTATAATAGTAGCAGAAAACTGCATAAAAGATGTTAACGAAGATATTAATTATTATGCTA
AATTATCAGATATACCGGTTTATACACATGAGTCAATATCATTAGAATTAGGGGCAATATGTGGTAAGCCATTCCCTGTT
TCTGCACTTATTGTTATGGATCCAGGAAACTCAACAATTTTGAACATAATAAACGAAGAAGACGAAGAAGACGATGAAGA
ATAA

Upstream 100 bases:

>100_bases
AAGGAATGAAGATATTTATAATTTTATAATAATTTTATATTATTTCATTCCATAAACACGGGAAACCCTCTGGAGAAATA
AATGAGAAAGAGGTATAACA

Downstream 100 bases:

>100_bases
TTAAAAAAATTTATATTTTATATATGGTGATGCTATGAAGGTTAAATTTGATAAGGACGGCATTATGAAGATGGCACTAT
TTGAAAAAATAACTAATGCC

Product: 50S ribosomal protein L30e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MDINRSIRVAVDTGSVVLGTKKVLKNIKHGEGKLIIVAENCIKDVNEDINYYAKLSDIPVYTHESISLELGAICGKPFPV
SALIVMDPGNSTILNIINEEDEEDDEE

Sequences:

>Translated_107_residues
MDINRSIRVAVDTGSVVLGTKKVLKNIKHGEGKLIIVAENCIKDVNEDINYYAKLSDIPVYTHESISLELGAICGKPFPV
SALIVMDPGNSTILNIINEEDEEDDEE
>Mature_107_residues
MDINRSIRVAVDTGSVVLGTKKVLKNIKHGEGKLIIVAENCIKDVNEDINYYAKLSDIPVYTHESISLELGAICGKPFPV
SALIVMDPGNSTILNIINEEDEEDDEE

Specific function: Unknown

COG id: COG1911

COG function: function code J; Ribosomal protein L30E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L30e family [H]

Homologues:

Organism=Homo sapiens, GI4506631, Length=103, Percent_Identity=36.8932038834951, Blast_Score=79, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI17508679, Length=93, Percent_Identity=37.6344086021505, Blast_Score=67, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6321408, Length=96, Percent_Identity=33.3333333333333, Blast_Score=62, Evalue=1e-11,
Organism=Drosophila melanogaster, GI17864264, Length=92, Percent_Identity=34.7826086956522, Blast_Score=68, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24585096, Length=92, Percent_Identity=34.7826086956522, Blast_Score=68, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000231
- InterPro:   IPR022991
- InterPro:   IPR004038 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 11742; Mature: 11742

Theoretical pI: Translated: 4.21; Mature: 4.21

Prosite motif: PS00709 RIBOSOMAL_L30E_1 ; PS00993 RIBOSOMAL_L30E_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDINRSIRVAVDTGSVVLGTKKVLKNIKHGEGKLIIVAENCIKDVNEDINYYAKLSDIPV
CCCCCEEEEEEECCCEEECCHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCEE
YTHESISLELGAICGKPFPVSALIVMDPGNSTILNIINEEDEEDDEE
EECCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCC
>Mature Secondary Structure
MDINRSIRVAVDTGSVVLGTKKVLKNIKHGEGKLIIVAENCIKDVNEDINYYAKLSDIPV
CCCCCEEEEEEECCCEEECCHHHHHCCCCCCCEEEEEEHHHHHHCCCCCEEEEEECCCEE
YTHESISLELGAICGKPFPVSALIVMDPGNSTILNIINEEDEEDDEE
EECCCEEEEEEEECCCCCCCEEEEEECCCCCEEEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA