Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is ybbK [C]

Identifier: 150401198

GI number: 150401198

Start: 792103

End: 792903

Strand: Reverse

Name: ybbK [C]

Synonym: Maeo_0769

Alternate gene names: 150401198

Gene position: 792903-792103 (Counterclockwise)

Preceding gene: 150401199

Following gene: 150401197

Centisome position: 50.52

GC content: 33.46

Gene sequence:

>801_bases
ATGTATTTGGAAATATTTGTTGGATTGATAATATTGTATATTATCATAAAATCAATGGTAATAGTTAATCAATATGAGCT
TGGTTTAGTATTTAGATTGGGTAAAGTTTCACGGGTTCTAGCTCCGGGGGTAAATTTACTTATTCCATTAATTGAAAATC
CTGTACGGGTAGATGTAAGAACAAAAGTAATAGATGTTCCTTCTCAAGAAATGATTACCCGAGATAATGCGGCCGTTTCA
ATTGATGCTGTGGTATATTATAGGGTAATAGATGTAAAAAGAGCACTATTGGAAGTTCAAAATTATCAATATGCCATAAT
AAACCTTACTCAAACCACACTTAGGGCAATTATCGGAAGTATGGAGCTTGATGAAGCGTTGAATAATAGGGAGTATATAA
ACACAAAATTATCTGAAACCCTTGACAAGGATACAGATGCATGGGGAGTTAAAGTTGAAAAGGTGGAGCTCCGAGAAATA
GAGCCACCAACAGACATAAAAAATGCAATGACCCAGCAAATGAAAGCCGAAAGATTAAAAAGAGCGGCGATATTAGAAGC
AGAAGGAGAAAAACAAAGTAAAATATTAAAAGCAGAAGGTATTGCCCAGAGTTTAAGGATAGAAGCAGAAGGGCAGGCAA
AGGCAATAAAAATTGTTGCAGAATCGGCACAACAATACTTCAAGGACGAAGCACAATTATATAAAGCGTTGGAAGTATCC
CGAGATGTATTAAAAGAAAATACAAAATATGTAATATCTGAAAATATAATAGATATTGCAAAGAAATTTATTAAAAAATA
A

Upstream 100 bases:

>100_bases
GTTAAAATAGTTGGTATTGAAGGTGTGAGTTTGATAGTCGAAAATATTGACGATATTGAACATATATAAATGAAAATAAA
AAATAAAATGGGTGTATATC

Downstream 100 bases:

>100_bases
ATTTATCTTTTTTATTATTATAATTATATTTAATTTTTAATCTCTTAGAAAAATATATATACTAAAAACATTTTTATGAT
TATAATTATATTTAATTTTT

Product: band 7 protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVRTKVIDVPSQEMITRDNAAVS
IDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGSMELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREI
EPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS
RDVLKENTKYVISENIIDIAKKFIKK

Sequences:

>Translated_266_residues
MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVRTKVIDVPSQEMITRDNAAVS
IDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGSMELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREI
EPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS
RDVLKENTKYVISENIIDIAKKFIKK
>Mature_266_residues
MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVRTKVIDVPSQEMITRDNAAVS
IDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGSMELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREI
EPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS
RDVLKENTKYVISENIIDIAKKFIKK

Specific function: Unknown

COG id: COG0330

COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the band 7/mec-2 family [H]

Homologues:

Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=37.7551020408163, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI38016911, Length=191, Percent_Identity=38.2198952879581, Blast_Score=130, Evalue=2e-30,
Organism=Homo sapiens, GI21686995, Length=198, Percent_Identity=36.8686868686869, Blast_Score=123, Evalue=1e-28,
Organism=Homo sapiens, GI221316744, Length=198, Percent_Identity=36.8686868686869, Blast_Score=123, Evalue=2e-28,
Organism=Homo sapiens, GI7657615, Length=176, Percent_Identity=27.8409090909091, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI20149563, Length=168, Percent_Identity=29.7619047619048, Blast_Score=81, Evalue=9e-16,
Organism=Escherichia coli, GI1786697, Length=232, Percent_Identity=44.8275862068966, Blast_Score=198, Evalue=3e-52,
Organism=Caenorhabditis elegans, GI193209764, Length=191, Percent_Identity=40.3141361256544, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17569493, Length=191, Percent_Identity=40.3141361256544, Blast_Score=145, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI32564147, Length=218, Percent_Identity=37.1559633027523, Blast_Score=132, Evalue=2e-31,
Organism=Caenorhabditis elegans, GI32566490, Length=218, Percent_Identity=35.7798165137615, Blast_Score=130, Evalue=8e-31,
Organism=Caenorhabditis elegans, GI25153583, Length=208, Percent_Identity=37.9807692307692, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71987612, Length=208, Percent_Identity=37.9807692307692, Blast_Score=125, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI71987621, Length=208, Percent_Identity=37.9807692307692, Blast_Score=124, Evalue=4e-29,
Organism=Caenorhabditis elegans, GI17569499, Length=189, Percent_Identity=35.978835978836, Blast_Score=124, Evalue=6e-29,
Organism=Caenorhabditis elegans, GI17569497, Length=187, Percent_Identity=34.2245989304813, Blast_Score=122, Evalue=2e-28,
Organism=Caenorhabditis elegans, GI71989948, Length=199, Percent_Identity=36.6834170854271, Blast_Score=115, Evalue=2e-26,
Organism=Caenorhabditis elegans, GI71989955, Length=185, Percent_Identity=36.7567567567568, Blast_Score=114, Evalue=4e-26,
Organism=Caenorhabditis elegans, GI17570459, Length=193, Percent_Identity=33.6787564766839, Blast_Score=113, Evalue=8e-26,
Organism=Caenorhabditis elegans, GI17570161, Length=181, Percent_Identity=39.2265193370166, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI193210507, Length=181, Percent_Identity=39.2265193370166, Blast_Score=105, Evalue=2e-23,
Organism=Caenorhabditis elegans, GI71989963, Length=125, Percent_Identity=34.4, Blast_Score=83, Evalue=1e-16,
Organism=Drosophila melanogaster, GI45550506, Length=198, Percent_Identity=40.4040404040404, Blast_Score=148, Evalue=4e-36,
Organism=Drosophila melanogaster, GI45556022, Length=191, Percent_Identity=39.2670157068063, Blast_Score=137, Evalue=7e-33,
Organism=Drosophila melanogaster, GI24657857, Length=197, Percent_Identity=39.5939086294416, Blast_Score=135, Evalue=3e-32,
Organism=Drosophila melanogaster, GI62484448, Length=189, Percent_Identity=40.2116402116402, Blast_Score=135, Evalue=4e-32,
Organism=Drosophila melanogaster, GI281365664, Length=189, Percent_Identity=40.2116402116402, Blast_Score=134, Evalue=4e-32,
Organism=Drosophila melanogaster, GI62484274, Length=189, Percent_Identity=40.2116402116402, Blast_Score=134, Evalue=6e-32,
Organism=Drosophila melanogaster, GI21356845, Length=199, Percent_Identity=35.1758793969849, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI18860517, Length=190, Percent_Identity=39.4736842105263, Blast_Score=132, Evalue=2e-31,
Organism=Drosophila melanogaster, GI28573263, Length=212, Percent_Identity=32.0754716981132, Blast_Score=121, Evalue=4e-28,
Organism=Drosophila melanogaster, GI281361633, Length=205, Percent_Identity=31.7073170731707, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281361631, Length=205, Percent_Identity=31.7073170731707, Blast_Score=112, Evalue=4e-25,
Organism=Drosophila melanogaster, GI281361635, Length=140, Percent_Identity=34.2857142857143, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001107
- InterPro:   IPR018080
- InterPro:   IPR001972 [H]

Pfam domain/function: PF01145 Band_7 [H]

EC number: NA

Molecular weight: Translated: 30198; Mature: 30198

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: PS01270 BAND_7

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHEEHHHHCCCEEEEEE
TKVIDVPSQEMITRDNAAVSIDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGS
EEEEECCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCC
MELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLK
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHCCCCCCHHHHHHHHHHHHHHHHH
RAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS
HHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDVLKENTKYVISENIIDIAKKFIKK
HHHHHCCCCEEHHHHHHHHHHHHHCC
>Mature Secondary Structure
MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVR
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHEEHHHHCCCEEEEEE
TKVIDVPSQEMITRDNAAVSIDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGS
EEEEECCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCC
MELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLK
HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHCCCCCCHHHHHHHHHHHHHHHHH
RAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS
HHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RDVLKENTKYVISENIIDIAKKFIKK
HHHHHCCCCEEHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]