| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is ybbK [C]
Identifier: 150401198
GI number: 150401198
Start: 792103
End: 792903
Strand: Reverse
Name: ybbK [C]
Synonym: Maeo_0769
Alternate gene names: 150401198
Gene position: 792903-792103 (Counterclockwise)
Preceding gene: 150401199
Following gene: 150401197
Centisome position: 50.52
GC content: 33.46
Gene sequence:
>801_bases ATGTATTTGGAAATATTTGTTGGATTGATAATATTGTATATTATCATAAAATCAATGGTAATAGTTAATCAATATGAGCT TGGTTTAGTATTTAGATTGGGTAAAGTTTCACGGGTTCTAGCTCCGGGGGTAAATTTACTTATTCCATTAATTGAAAATC CTGTACGGGTAGATGTAAGAACAAAAGTAATAGATGTTCCTTCTCAAGAAATGATTACCCGAGATAATGCGGCCGTTTCA ATTGATGCTGTGGTATATTATAGGGTAATAGATGTAAAAAGAGCACTATTGGAAGTTCAAAATTATCAATATGCCATAAT AAACCTTACTCAAACCACACTTAGGGCAATTATCGGAAGTATGGAGCTTGATGAAGCGTTGAATAATAGGGAGTATATAA ACACAAAATTATCTGAAACCCTTGACAAGGATACAGATGCATGGGGAGTTAAAGTTGAAAAGGTGGAGCTCCGAGAAATA GAGCCACCAACAGACATAAAAAATGCAATGACCCAGCAAATGAAAGCCGAAAGATTAAAAAGAGCGGCGATATTAGAAGC AGAAGGAGAAAAACAAAGTAAAATATTAAAAGCAGAAGGTATTGCCCAGAGTTTAAGGATAGAAGCAGAAGGGCAGGCAA AGGCAATAAAAATTGTTGCAGAATCGGCACAACAATACTTCAAGGACGAAGCACAATTATATAAAGCGTTGGAAGTATCC CGAGATGTATTAAAAGAAAATACAAAATATGTAATATCTGAAAATATAATAGATATTGCAAAGAAATTTATTAAAAAATA A
Upstream 100 bases:
>100_bases GTTAAAATAGTTGGTATTGAAGGTGTGAGTTTGATAGTCGAAAATATTGACGATATTGAACATATATAAATGAAAATAAA AAATAAAATGGGTGTATATC
Downstream 100 bases:
>100_bases ATTTATCTTTTTTATTATTATAATTATATTTAATTTTTAATCTCTTAGAAAAATATATATACTAAAAACATTTTTATGAT TATAATTATATTTAATTTTT
Product: band 7 protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 266; Mature: 266
Protein sequence:
>266_residues MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVRTKVIDVPSQEMITRDNAAVS IDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGSMELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREI EPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS RDVLKENTKYVISENIIDIAKKFIKK
Sequences:
>Translated_266_residues MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVRTKVIDVPSQEMITRDNAAVS IDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGSMELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREI EPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS RDVLKENTKYVISENIIDIAKKFIKK >Mature_266_residues MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVRTKVIDVPSQEMITRDNAAVS IDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGSMELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREI EPPTDIKNAMTQQMKAERLKRAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS RDVLKENTKYVISENIIDIAKKFIKK
Specific function: Unknown
COG id: COG0330
COG function: function code O; Membrane protease subunits, stomatin/prohibitin homologs
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the band 7/mec-2 family [H]
Homologues:
Organism=Homo sapiens, GI7305503, Length=196, Percent_Identity=37.7551020408163, Blast_Score=140, Evalue=2e-33, Organism=Homo sapiens, GI38016911, Length=191, Percent_Identity=38.2198952879581, Blast_Score=130, Evalue=2e-30, Organism=Homo sapiens, GI21686995, Length=198, Percent_Identity=36.8686868686869, Blast_Score=123, Evalue=1e-28, Organism=Homo sapiens, GI221316744, Length=198, Percent_Identity=36.8686868686869, Blast_Score=123, Evalue=2e-28, Organism=Homo sapiens, GI7657615, Length=176, Percent_Identity=27.8409090909091, Blast_Score=98, Evalue=9e-21, Organism=Homo sapiens, GI20149563, Length=168, Percent_Identity=29.7619047619048, Blast_Score=81, Evalue=9e-16, Organism=Escherichia coli, GI1786697, Length=232, Percent_Identity=44.8275862068966, Blast_Score=198, Evalue=3e-52, Organism=Caenorhabditis elegans, GI193209764, Length=191, Percent_Identity=40.3141361256544, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI17569493, Length=191, Percent_Identity=40.3141361256544, Blast_Score=145, Evalue=3e-35, Organism=Caenorhabditis elegans, GI32564147, Length=218, Percent_Identity=37.1559633027523, Blast_Score=132, Evalue=2e-31, Organism=Caenorhabditis elegans, GI32566490, Length=218, Percent_Identity=35.7798165137615, Blast_Score=130, Evalue=8e-31, Organism=Caenorhabditis elegans, GI25153583, Length=208, Percent_Identity=37.9807692307692, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71987612, Length=208, Percent_Identity=37.9807692307692, Blast_Score=125, Evalue=3e-29, Organism=Caenorhabditis elegans, GI71987621, Length=208, Percent_Identity=37.9807692307692, Blast_Score=124, Evalue=4e-29, Organism=Caenorhabditis elegans, GI17569499, Length=189, Percent_Identity=35.978835978836, Blast_Score=124, Evalue=6e-29, Organism=Caenorhabditis elegans, GI17569497, Length=187, Percent_Identity=34.2245989304813, Blast_Score=122, Evalue=2e-28, Organism=Caenorhabditis elegans, GI71989948, Length=199, Percent_Identity=36.6834170854271, Blast_Score=115, Evalue=2e-26, Organism=Caenorhabditis elegans, GI71989955, Length=185, Percent_Identity=36.7567567567568, Blast_Score=114, Evalue=4e-26, Organism=Caenorhabditis elegans, GI17570459, Length=193, Percent_Identity=33.6787564766839, Blast_Score=113, Evalue=8e-26, Organism=Caenorhabditis elegans, GI17570161, Length=181, Percent_Identity=39.2265193370166, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI193210507, Length=181, Percent_Identity=39.2265193370166, Blast_Score=105, Evalue=2e-23, Organism=Caenorhabditis elegans, GI71989963, Length=125, Percent_Identity=34.4, Blast_Score=83, Evalue=1e-16, Organism=Drosophila melanogaster, GI45550506, Length=198, Percent_Identity=40.4040404040404, Blast_Score=148, Evalue=4e-36, Organism=Drosophila melanogaster, GI45556022, Length=191, Percent_Identity=39.2670157068063, Blast_Score=137, Evalue=7e-33, Organism=Drosophila melanogaster, GI24657857, Length=197, Percent_Identity=39.5939086294416, Blast_Score=135, Evalue=3e-32, Organism=Drosophila melanogaster, GI62484448, Length=189, Percent_Identity=40.2116402116402, Blast_Score=135, Evalue=4e-32, Organism=Drosophila melanogaster, GI281365664, Length=189, Percent_Identity=40.2116402116402, Blast_Score=134, Evalue=4e-32, Organism=Drosophila melanogaster, GI62484274, Length=189, Percent_Identity=40.2116402116402, Blast_Score=134, Evalue=6e-32, Organism=Drosophila melanogaster, GI21356845, Length=199, Percent_Identity=35.1758793969849, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI18860517, Length=190, Percent_Identity=39.4736842105263, Blast_Score=132, Evalue=2e-31, Organism=Drosophila melanogaster, GI28573263, Length=212, Percent_Identity=32.0754716981132, Blast_Score=121, Evalue=4e-28, Organism=Drosophila melanogaster, GI281361633, Length=205, Percent_Identity=31.7073170731707, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI281361631, Length=205, Percent_Identity=31.7073170731707, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI281361635, Length=140, Percent_Identity=34.2857142857143, Blast_Score=83, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001107 - InterPro: IPR018080 - InterPro: IPR001972 [H]
Pfam domain/function: PF01145 Band_7 [H]
EC number: NA
Molecular weight: Translated: 30198; Mature: 30198
Theoretical pI: Translated: 7.03; Mature: 7.03
Prosite motif: PS01270 BAND_7
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHEEHHHHCCCEEEEEE TKVIDVPSQEMITRDNAAVSIDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGS EEEEECCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCC MELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLK HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHCCCCCCHHHHHHHHHHHHHHHHH RAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS HHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDVLKENTKYVISENIIDIAKKFIKK HHHHHCCCCEEHHHHHHHHHHHHHCC >Mature Secondary Structure MYLEIFVGLIILYIIIKSMVIVNQYELGLVFRLGKVSRVLAPGVNLLIPLIENPVRVDVR CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCHHEEHHHHCCCEEEEEE TKVIDVPSQEMITRDNAAVSIDAVVYYRVIDVKRALLEVQNYQYAIINLTQTTLRAIIGS EEEEECCCHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHCCEEEEEEHHHHHHHHHHCC MELDEALNNREYINTKLSETLDKDTDAWGVKVEKVELREIEPPTDIKNAMTQQMKAERLK HHHHHHHCCHHHHHHHHHHHHCCCCCCCCEEEEEEEHCCCCCCHHHHHHHHHHHHHHHHH RAAILEAEGEKQSKILKAEGIAQSLRIEAEGQAKAIKIVAESAQQYFKDEAQLYKALEVS HHHHHHCCCCHHHHHHHHHHHHHHHEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH RDVLKENTKYVISENIIDIAKKFIKK HHHHHCCCCEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]