| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401197
Identifier: 150401197
GI number: 150401197
Start: 791090
End: 791866
Strand: Reverse
Name: 150401197
Synonym: Maeo_0768
Alternate gene names: NA
Gene position: 791866-791090 (Counterclockwise)
Preceding gene: 150401198
Following gene: 150401196
Centisome position: 50.45
GC content: 31.79
Gene sequence:
>777_bases ATGTTTTGGGAAGAAATTATAAAAAAAGGAATAGAATATTTAAAAAATAAACAATACGATAAAGCCATTGAGGAATATAA GAAAGCACTGGAAATCAGCCCCGATAAAGAAAAATGGCATATAAATAATAATATGGGGTTCTGTTATCTATTAAAGGAAG AATACGATAAAGCCATCAAGTACCATAAGAAAGCACTGGAAATCAGCCCCGATAAAGAAAAATGGCAGATGAATAATAAT ATGGGGTTCTGTTATCACTCAGAAGAAGAATACGATAAAGCCCTTGAAGAGTATAATGAAGCATGTGAAATCAGCCCCGA TAAAGAAAAATGGCAAATAAATGACAATCTAGGTTTCCGTGATCATCTGTTAAAAGAAGAATACGATAAAGCCATTAAAT ATTATAAGAAAGCACTGGAAATCAGCCCAGATGATAAGAAATGGAGCATATATAACAATTTGAGTTTATGTCATCTGTTA AAAGAAGAATACGATAAAGCCATTAAATATTATAAGAAAGCACTGGAAATCAGCCCAGATGATAAGAAATGGAGCATATA TAACAATTTGAGTTTATGTCATCGGTTAAAAGAAGAATACGATAAAGCCATTAAATATTATAAGAAAGCACTGGAAATCA GCCCCGATAAAGAAAAATGGCAGATAAATGACAATCTGGGTTTCTGTTATCAATTAAAAGAAGAATACGATAAAGCCATC AAGTACCATAATAAAGCATTGGAGCTTAGCCCAGATGATAAAAAATGGAGTATATGA
Upstream 100 bases:
>100_bases TTAACAAAATAATAGTGTATTATAATGACATAACCACAAACATATATCATAACAATATCAAATCATATGATTTCTAACAA TTAATTTAACTGGTGATTAT
Downstream 100 bases:
>100_bases CAATTTGAGTTTCTGTTATCGATTTAACAGAAGGATACGATAAAGCTATCAAATTATAATAATTATTTATTTTACAATTA TATCTAATTTTTAATCTCTT
Product: TPR repeat-containing protein
Products: NA
Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat-Containing Protein; Peptidase; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Protein; TPR Repeat Protein; TPR Domain Containing Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked GLCNAC Transferase; O-Linked Glcnac Transferase; NB-ARC Domain-Containing Protein; TPR Domain Family Protein; Sulfotransferase; Serine/Threonine Kinase; Protein Prenyltransferase Subunit Alpha; Tetratricopeptide Repeat Protein; Sel1-Like Repeat Protein; M50 Family Peptidase; O-Antigen N-Acetylglucosamine Transferase; Tfp Pilus Assembly Protein PilF-Like; Protein Kinase; O-Antigen GlcNac Transferase; Glycosyl Transferase Family Protein; Response Regulator Receiver Protein; Beta-Lactamase Domain-Containing Protein; TPR -Repeat Containing Protein
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIKYHKKALEISPDKEKWQMNNN MGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFRDHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLL KEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI KYHNKALELSPDDKKWSI
Sequences:
>Translated_258_residues MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIKYHKKALEISPDKEKWQMNNN MGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFRDHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLL KEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI KYHNKALELSPDDKKWSI >Mature_258_residues MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIKYHKKALEISPDKEKWQMNNN MGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFRDHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLL KEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI KYHNKALELSPDDKKWSI
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI224028289, Length=265, Percent_Identity=27.5471698113208, Blast_Score=82, Evalue=4e-16, Organism=Homo sapiens, GI301336134, Length=238, Percent_Identity=26.0504201680672, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI83415184, Length=248, Percent_Identity=25.4032258064516, Blast_Score=78, Evalue=8e-15, Organism=Homo sapiens, GI25952122, Length=213, Percent_Identity=27.6995305164319, Blast_Score=69, Evalue=4e-12, Organism=Caenorhabditis elegans, GI115532692, Length=254, Percent_Identity=25.9842519685039, Blast_Score=64, Evalue=9e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31394; Mature: 31394
Theoretical pI: Translated: 6.41; Mature: 6.41
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIK CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEHHHHHHHHH YHKKALEISPDKEKWQMNNNMGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFR HHHHHHCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHH DHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLLKEEYDKAIKYYKKALEISPD HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHH KYHNKALELSPDDKKWSI HHCCCEEECCCCCCCCCC >Mature Secondary Structure MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIK CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEHHHHHHHHH YHKKALEISPDKEKWQMNNNMGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFR HHHHHHCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHH DHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLLKEEYDKAIKYYKKALEISPD HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC DKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHH KYHNKALELSPDDKKWSI HHCCCEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA