Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401197

Identifier: 150401197

GI number: 150401197

Start: 791090

End: 791866

Strand: Reverse

Name: 150401197

Synonym: Maeo_0768

Alternate gene names: NA

Gene position: 791866-791090 (Counterclockwise)

Preceding gene: 150401198

Following gene: 150401196

Centisome position: 50.45

GC content: 31.79

Gene sequence:

>777_bases
ATGTTTTGGGAAGAAATTATAAAAAAAGGAATAGAATATTTAAAAAATAAACAATACGATAAAGCCATTGAGGAATATAA
GAAAGCACTGGAAATCAGCCCCGATAAAGAAAAATGGCATATAAATAATAATATGGGGTTCTGTTATCTATTAAAGGAAG
AATACGATAAAGCCATCAAGTACCATAAGAAAGCACTGGAAATCAGCCCCGATAAAGAAAAATGGCAGATGAATAATAAT
ATGGGGTTCTGTTATCACTCAGAAGAAGAATACGATAAAGCCCTTGAAGAGTATAATGAAGCATGTGAAATCAGCCCCGA
TAAAGAAAAATGGCAAATAAATGACAATCTAGGTTTCCGTGATCATCTGTTAAAAGAAGAATACGATAAAGCCATTAAAT
ATTATAAGAAAGCACTGGAAATCAGCCCAGATGATAAGAAATGGAGCATATATAACAATTTGAGTTTATGTCATCTGTTA
AAAGAAGAATACGATAAAGCCATTAAATATTATAAGAAAGCACTGGAAATCAGCCCAGATGATAAGAAATGGAGCATATA
TAACAATTTGAGTTTATGTCATCGGTTAAAAGAAGAATACGATAAAGCCATTAAATATTATAAGAAAGCACTGGAAATCA
GCCCCGATAAAGAAAAATGGCAGATAAATGACAATCTGGGTTTCTGTTATCAATTAAAAGAAGAATACGATAAAGCCATC
AAGTACCATAATAAAGCATTGGAGCTTAGCCCAGATGATAAAAAATGGAGTATATGA

Upstream 100 bases:

>100_bases
TTAACAAAATAATAGTGTATTATAATGACATAACCACAAACATATATCATAACAATATCAAATCATATGATTTCTAACAA
TTAATTTAACTGGTGATTAT

Downstream 100 bases:

>100_bases
CAATTTGAGTTTCTGTTATCGATTTAACAGAAGGATACGATAAAGCTATCAAATTATAATAATTATTTATTTTACAATTA
TATCTAATTTTTAATCTCTT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family Protein; Tetratricopeptide Repeat Family; Tetratricopeptide Repeat-Containing Protein; Peptidase; O-Linked GlcNAc Transferase; O-Linked N-Acetylglucosamine Transferase; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Protein; TPR Repeat Protein; TPR Domain Containing Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat Domain-Containing Protein; TPR Repeat-Containing Serine/Threonin Protein Kinase; O-Linked GLCNAC Transferase; O-Linked Glcnac Transferase; NB-ARC Domain-Containing Protein; TPR Domain Family Protein; Sulfotransferase; Serine/Threonine Kinase; Protein Prenyltransferase Subunit Alpha; Tetratricopeptide Repeat Protein; Sel1-Like Repeat Protein; M50 Family Peptidase; O-Antigen N-Acetylglucosamine Transferase; Tfp Pilus Assembly Protein PilF-Like; Protein Kinase; O-Antigen GlcNac Transferase; Glycosyl Transferase Family Protein; Response Regulator Receiver Protein; Beta-Lactamase Domain-Containing Protein; TPR -Repeat Containing Protein

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIKYHKKALEISPDKEKWQMNNN
MGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFRDHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLL
KEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI
KYHNKALELSPDDKKWSI

Sequences:

>Translated_258_residues
MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIKYHKKALEISPDKEKWQMNNN
MGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFRDHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLL
KEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI
KYHNKALELSPDDKKWSI
>Mature_258_residues
MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIKYHKKALEISPDKEKWQMNNN
MGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFRDHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLL
KEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI
KYHNKALELSPDDKKWSI

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224028289, Length=265, Percent_Identity=27.5471698113208, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI301336134, Length=238, Percent_Identity=26.0504201680672, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI83415184, Length=248, Percent_Identity=25.4032258064516, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI25952122, Length=213, Percent_Identity=27.6995305164319, Blast_Score=69, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI115532692, Length=254, Percent_Identity=25.9842519685039, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31394; Mature: 31394

Theoretical pI: Translated: 6.41; Mature: 6.41

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEHHHHHHHHH
YHKKALEISPDKEKWQMNNNMGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFR
HHHHHHCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHH
DHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLLKEEYDKAIKYYKKALEISPD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHH
KYHNKALELSPDDKKWSI
HHCCCEEECCCCCCCCCC
>Mature Secondary Structure
MFWEEIIKKGIEYLKNKQYDKAIEEYKKALEISPDKEKWHINNNMGFCYLLKEEYDKAIK
CCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCEEECCCCCEEEEEHHHHHHHHH
YHKKALEISPDKEKWQMNNNMGFCYHSEEEYDKALEEYNEACEISPDKEKWQINDNLGFR
HHHHHHCCCCCHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCCCCCCCEEECCCCCHH
DHLLKEEYDKAIKYYKKALEISPDDKKWSIYNNLSLCHLLKEEYDKAIKYYKKALEISPD
HHHHHHHHHHHHHHHHHHHCCCCCCCCEEHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
DKKWSIYNNLSLCHRLKEEYDKAIKYYKKALEISPDKEKWQINDNLGFCYQLKEEYDKAI
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHH
KYHNKALELSPDDKKWSI
HHCCCEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA