| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150401170
Identifier: 150401170
GI number: 150401170
Start: 761147
End: 762541
Strand: Direct
Name: 150401170
Synonym: Maeo_0741
Alternate gene names: NA
Gene position: 761147-762541 (Clockwise)
Preceding gene: 150401159
Following gene: 150401171
Centisome position: 48.5
GC content: 31.11
Gene sequence:
>1395_bases ATGATGATAGAAATAGGCACAACAAAATATGTTATTTATGCAAAAGTTATAGTTGATGGATATGTTGAAAAACATGATAT TATTGGAGCAATATTTGGTCAAACCGAAGGACTTTTAGGAAGCGACCTTGATTTAAGGGACCTCCAAAAAAGTGGAAGAA TTGGGAGGATAGATGTTGAACTTGAAAATATAAATGGAAAATCATACGCAAAACTAATTTTTCCATCTAGTTTAGACAGA GTTGAAACAGCAATAATTGCTGCCACAATTGAAACACTTGATAGAGTAGGGCCATGTATTGCAACAATTAAAGTATTAAA TATAGAAGACATAAGAATCAAAAAGAGACAATATATTACGGATAGGGCAAAAGAACTTTTAAAATCAATAGTTGATACTA CAATAGATACCTACGAAATAGCCGAAGAAATAAAGGAATTCGTAAGGTCAGAAGAAATAATCGAGATGGGAAATGAAAAG TTACCATCTGGCCCAAATGTTGAGGATTCAGATACCATAATTATTGTTGAAGGGCGTGCTGATGTTCTAAATTTATTACG ATGTGGCATAAAAAATGCCATAGCGGTTGGAGGAACATCCATTCCAGAATCCATTATAGAATTATCTAAGAAAAAAACCA CCACAATATTTACAGACGGGGACCGCGGGGGAGAACTAATATTAAAAGAGGCCATTCAAACTTGCGATATCGATTATGTA GCCAGAGCTCCGAAGGGTAGGGAAGTAGAGGAGCTCACCAAAAAAGAAGTGGTAAAATATTTAAGGTCCAAAATACCAAT AGAACAATATATTCAATTTCATTCCAACAAATGTAACGAATTATTAAAAAAAAGCAAAGAATATAGGAGTAATACCATAA ATAACAATAATGACAGTGGTAAAATATCAATTGATTCAATAATCTCTGAAAACGCGACAAACGATATAGGGGAGCTCCCT GTATCCAAAACTTCGAAAAATGAAAGGAATAATACCAAGGTTATTGACGAAAATATTGAGAAAAATAATCAAAATATAAA AGAAGACAATAATATAGAGATTAAACAAAGCGATATTTCTGAAATATTAAAAAAAGATTGTTCTGAACAGTGGGAATATA TTGAATCACTATTAAATGACATATCCAACACAGACAATATAAAAATAATAACCAACGACAATATTATAAAAACCATACAT TACAGCGAATTAGATAAAATAGATAAATCAGATATTCAAATGGTTATGTCAGATATGCCAATTACTCAAAAAATAACAGA TTTATTCCATGAATGTTCTCCGATAATAATTGGAAGAGATATAAATATTACAAAAAAACCGGCAAAGTTAAAAGTTTTTT CTCATGACATGCTAAAAAACATGGTATGTTTATAG
Upstream 100 bases:
>100_bases TTATATATATTTAAAATTAGTTGAATTGTTATATTATATACTATGTAGATATTATATATTATTATATTATGTGAGACTGG CAGGGAGTTGGAGGGATAAT
Downstream 100 bases:
>100_bases TTAATAGCGAAACATGTGGTATCGAAATCTCTGATTTCGAGTAATAATAATCGGAGATTTTTATCTGATGTTATGTCAAA ACATGGAGCTCCCGGTATAA
Product: DNA primase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 464; Mature: 464
Protein sequence:
>464_residues MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVELENINGKSYAKLIFPSSLDR VETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYITDRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEK LPSGPNVEDSDTIIIVEGRADVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSGKISIDSIISENATNDIGELP VSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDISEILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIH YSELDKIDKSDIQMVMSDMPITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL
Sequences:
>Translated_464_residues MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVELENINGKSYAKLIFPSSLDR VETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYITDRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEK LPSGPNVEDSDTIIIVEGRADVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSGKISIDSIISENATNDIGELP VSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDISEILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIH YSELDKIDKSDIQMVMSDMPITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL >Mature_464_residues MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVELENINGKSYAKLIFPSSLDR VETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYITDRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEK LPSGPNVEDSDTIIIVEGRADVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSGKISIDSIISENATNDIGELP VSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDISEILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIH YSELDKIDKSDIQMVMSDMPITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL
Specific function: Unknown
COG id: COG0358
COG function: function code L; DNA primase (bacterial type)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 Toprim domain
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y741_META3 (A6UV02)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324936.1 - ProteinModelPortal: A6UV02 - SMR: A6UV02 - STRING: A6UV02 - GeneID: 5327752 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0741 - eggNOG: arNOG04629 - HOGENOM: HBG541216 - OMA: QTCDIDY - ProtClustDB: PRK04031 - BioCyc: MAEO419665:MAEO_0741-MONOMER - HAMAP: MF_00007 - InterPro: IPR006171 - InterPro: IPR020607 - SMART: SM00493
Pfam domain/function: PF01751 Toprim
EC number: NA
Molecular weight: Translated: 52357; Mature: 52357
Theoretical pI: Translated: 4.85; Mature: 4.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVE CEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEE LENINGKSYAKLIFPSSLDRVETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYIT EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHEEEEECCHHHHHHHHHHHH DRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEKLPSGPNVEDSDTIIIVEGRA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCH DVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHH ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSG HCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KISIDSIISENATNDIGELPVSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDIS CEEHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCEEEEHHHHH EILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIHYSELDKIDKSDIQMVMSDMP HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHCCC ITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL HHHHHHHHHHCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHCCC >Mature Secondary Structure MMIEIGTTKYVIYAKVIVDGYVEKHDIIGAIFGQTEGLLGSDLDLRDLQKSGRIGRIDVE CEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCCCEEEEEEE LENINGKSYAKLIFPSSLDRVETAIIAATIETLDRVGPCIATIKVLNIEDIRIKKRQYIT EECCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHCHHHHEEEEECCHHHHHHHHHHHH DRAKELLKSIVDTTIDTYEIAEEIKEFVRSEEIIEMGNEKLPSGPNVEDSDTIIIVEGRA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEEEEECCH DVLNLLRCGIKNAIAVGGTSIPESIIELSKKKTTTIFTDGDRGGELILKEAIQTCDIDYV HHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHCCCHHH ARAPKGREVEELTKKEVVKYLRSKIPIEQYIQFHSNKCNELLKKSKEYRSNTINNNNDSG HCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC KISIDSIISENATNDIGELPVSKTSKNERNNTKVIDENIEKNNQNIKEDNNIEIKQSDIS CEEHHHHHHCCCCCCHHCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCEEEEHHHHH EILKKDCSEQWEYIESLLNDISNTDNIKIITNDNIIKTIHYSELDKIDKSDIQMVMSDMP HHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCEEEEEEHHHHHCCCHHHHHHHHHCCC ITQKITDLFHECSPIIIGRDINITKKPAKLKVFSHDMLKNMVCL HHHHHHHHHHCCCCEEEECCCCCCCCCCEEEHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA