Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is dtdA

Identifier: 150401162

GI number: 150401162

Start: 751099

End: 751902

Strand: Reverse

Name: dtdA

Synonym: Maeo_0733

Alternate gene names: 150401162

Gene position: 751902-751099 (Counterclockwise)

Preceding gene: 150401163

Following gene: 150401161

Centisome position: 47.91

GC content: 26.99

Gene sequence:

>804_bases
ATGAAATATTTATTTATAAATTCTTCAAAAGATAAAGCTGGAATAAATATAAGAAACAATTTAGAAAAATTAAATAATAT
AAATAATAACTGTATAATTGATTTTTTTGAAACTCCTAAAAAATTAACAGAATTATCCAAAAAAGACCTCCCCCAAGATT
ATGATTATTATATTTTTTTATCCAAACATAGAAGTGTTAGTGAAAAACCAACTTTAACAGTTCATACCTCTGGAAATTTA
ACAACAGACAACAGCCACGGCGGAAATATTGAGGAGGTTTGTTGCTGTGATGCTATTTTAAACACTATTTTATTAGTAAA
TATCAATAAATACAATAATTTAGAAAAATATAAAAAATTAGGTTTTGATGTTTCATTTGAGGCAATCCACCATGCACCAA
CTGATTTAGATGTCCCCTCTGTTTTTGTTGAAATAGGGAGCTCCGAAAAAGAATGGGCAATAGATGAGGCAGGAGAAATA
ATGGCAAATGCCATAATTGATACCATATCATCAATTGAATCAAAATCTTATAAAAAATTGGATAAGGTGATAGCCTTTGG
CGGAGGGCATTATGCCCCAAGATTTACAAAATTATCATTATCAAATAAATGTTTCGTCGGATATATAATTCCAAAATATG
CAAAAATATCTGAAAAGGTGCTACAACAGTTAATTCAGATGCAAGATTTTGACTATATATTATTTGACTGGAAAGGTATA
AATAGCGAAGATAAAAAAAGATATATTGAATTTTTTGATAAAAATAATATTTTATGGAAAAAAGTTAAAGATTTATGTTA
TTAA

Upstream 100 bases:

>100_bases
TGTAATAACTGGGTTTAAAATACTTATTAAACTCATATTCCATAAACTGCATTAATATATTAATATGCCAATATATATAA
TAAATAAAATAAGGGAAAAA

Downstream 100 bases:

>100_bases
TTTATATATATTATATATACATATAATATATATTAATAATATATGGCGTATTTAGGAACTCATTGATAAATATAGTTAAT
CTTCAATAACTGTCCCTTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 267; Mature: 267

Protein sequence:

>267_residues
MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFLSKHRSVSEKPTLTVHTSGNL
TTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKLGFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEI
MANAIIDTISSIESKSYKKLDKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI
NSEDKKRYIEFFDKNNILWKKVKDLCY

Sequences:

>Translated_267_residues
MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFLSKHRSVSEKPTLTVHTSGNL
TTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKLGFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEI
MANAIIDTISSIESKSYKKLDKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI
NSEDKKRYIEFFDKNNILWKKVKDLCY
>Mature_267_residues
MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFLSKHRSVSEKPTLTVHTSGNL
TTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKLGFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEI
MANAIIDTISSIESKSYKKLDKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI
NSEDKKRYIEFFDKNNILWKKVKDLCY

Specific function: Hydrolyzes D-tyrosyl-tRNA(Tyr) into D-tyrosine and free tRNA(Tyr)

COG id: COG1650

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dtdA deacylase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DTDA_META3 (A6UUZ4)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324928.1
- ProteinModelPortal:   A6UUZ4
- SMR:   A6UUZ4
- STRING:   A6UUZ4
- GeneID:   5326599
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0733
- eggNOG:   arNOG10590
- HOGENOM:   HBG626914
- OMA:   MAVERNT
- ProtClustDB:   PRK03995
- BioCyc:   MAEO419665:MAEO_0733-MONOMER
- HAMAP:   MF_00562
- InterPro:   IPR007508
- InterPro:   IPR018033
- PIRSF:   PIRSF016210

Pfam domain/function: PF04414 tRNA_deacylase

EC number: NA

Molecular weight: Translated: 30685; Mature: 30685

Theoretical pI: Translated: 7.08; Mature: 7.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFL
CEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHCCCCCCCEEEEE
SKHRSVSEKPTLTVHTSGNLTTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKL
ECCCCCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHC
GFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEIMANAIIDTISSIESKSYKKL
CCCCEEHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI
HHHHEECCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
NSEDKKRYIEFFDKNNILWKKVKDLCY
CCHHHHHHHHHHCCCCCHHHHHHHHCC
>Mature Secondary Structure
MKYLFINSSKDKAGINIRNNLEKLNNINNNCIIDFFETPKKLTELSKKDLPQDYDYYIFL
CEEEEEECCCCCCCCCHHHHHHHHHCCCCCEEEEHHCCCHHHHHHHHHCCCCCCCEEEEE
SKHRSVSEKPTLTVHTSGNLTTDNSHGGNIEEVCCCDAILNTILLVNINKYNNLEKYKKL
ECCCCCCCCCEEEEECCCCEECCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHC
GFDVSFEAIHHAPTDLDVPSVFVEIGSSEKEWAIDEAGEIMANAIIDTISSIESKSYKKL
CCCCEEHHHHCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
DKVIAFGGGHYAPRFTKLSLSNKCFVGYIIPKYAKISEKVLQQLIQMQDFDYILFDWKGI
HHHHEECCCCCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCEEEEEECCC
NSEDKKRYIEFFDKNNILWKKVKDLCY
CCHHHHHHHHHHCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA