Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is 150401117

Identifier: 150401117

GI number: 150401117

Start: 706037

End: 706636

Strand: Reverse

Name: 150401117

Synonym: Maeo_0687

Alternate gene names: NA

Gene position: 706636-706037 (Counterclockwise)

Preceding gene: 150401121

Following gene: 150401111

Centisome position: 45.02

GC content: 28.83

Gene sequence:

>600_bases
ATGGACAATAAAAAAAAGAAAGGAACATGGGATAGAGGGTTGGATTTTGATAAAACATACAATTTATTTGTTGAAGAAAT
TGAAAGAATCAAGGAAACAGGGTTAAAATATAAAAAAGATATAAAAAGCATAGCTTATTTAATAATTGCCCTATTTCAGT
TAAGAAATGGTTGTAGGATAGGAGAGGCAATTGAGGGTATATTGTGGATATGTAAAAATAAAGATAAAATAAACTGGAAT
AAACCAATTGAAGTTTCGGTAAAAGTGGAAAAAACAAAAAAGAGCATAGCATATAGGGATATGTATTTTCCGTCAATGGT
TAAAAAAGAAGATATTGAATTGATAAGGGGTGTAATATTAGATTTAGAAAATGCAAAAAAACCAAGAATGAGGATTTATC
AATGGTTAAGAAATCATTATGGAATCAACACTCACTCATTACGATATGCATTTATAACAAAATTTGCTGAAATGAATACC
TCGCCACAACTAATCGCAAAAATGACAGGACATGTTAATTTAAATCATCTTATTACTTATACGCAAGAAAAAACTGCCAA
TAGGATGTTGCGAGATTTAGAAATACATATAACACGATAA

Upstream 100 bases:

>100_bases
TCAGAAATTTTTTACCAACTATTGCCTTATGGTTCATAAGGCAACATTTTTATATATTATCAAATAATAATATAAAATAA
CAATAAATATTGGTGATAAT

Downstream 100 bases:

>100_bases
ATAAAAAAGAAATAAATATATAACTATATATTATAGTGATAGGAGCTCCCAAAACACACATGCCTATGTCATATTATTGT
ATATTTTGCACATCTCTTTG

Product: phage integrase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRIGEAIEGILWICKNKDKINWN
KPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVILDLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNT
SPQLIAKMTGHVNLNHLITYTQEKTANRMLRDLEIHITR

Sequences:

>Translated_199_residues
MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRIGEAIEGILWICKNKDKINWN
KPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVILDLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNT
SPQLIAKMTGHVNLNHLITYTQEKTANRMLRDLEIHITR
>Mature_199_residues
MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRIGEAIEGILWICKNKDKINWN
KPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVILDLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNT
SPQLIAKMTGHVNLNHLITYTQEKTANRMLRDLEIHITR

Specific function: Unknown

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 23612; Mature: 23612

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
GEAIEGILWICKNKDKINWNKPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVIL
HHHHHHHHHEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
DLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNTSPQLIAKMTGHVNLNHLITY
HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEE
TQEKTANRMLRDLEIHITR
HHHHHHHHHHHHHEEEECC
>Mature Secondary Structure
MDNKKKKGTWDRGLDFDKTYNLFVEEIERIKETGLKYKKDIKSIAYLIIALFQLRNGCRI
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCH
GEAIEGILWICKNKDKINWNKPIEVSVKVEKTKKSIAYRDMYFPSMVKKEDIELIRGVIL
HHHHHHHHHEECCCCCCCCCCCEEEEEEEEHHHHHHHHHHHHCHHHHHHHHHHHHHHHHH
DLENAKKPRMRIYQWLRNHYGINTHSLRYAFITKFAEMNTSPQLIAKMTGHVNLNHLITY
HHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCHHHHEEE
TQEKTANRMLRDLEIHITR
HHHHHHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]