| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is ycbL [C]
Identifier: 150401087
GI number: 150401087
Start: 677249
End: 677872
Strand: Direct
Name: ycbL [C]
Synonym: Maeo_0657
Alternate gene names: 150401087
Gene position: 677249-677872 (Clockwise)
Preceding gene: 150401086
Following gene: 150401088
Centisome position: 43.15
GC content: 29.97
Gene sequence:
>624_bases ATGATATATAAATTAAATGGTATCGGACATGACTCTAACAGTTATTTAATTGTTGGAAAAAAGAATATATTAATTGACCC TGGAACTCCGGGCACTTTTGACTTAATAAGGGGCGAAATAGAACAGATTACAAAAAATATTGATTATATAGTCAATACTC ACTGCCATTATGACCATGCAGGAGCTAATTATTTATATGAAGAATACTTTAATGCCCCAGTAATTATAAGCGATAAAGAA TTAAAAGATTTAAAAAACGACACCCCTACAACAGTATCAAAATTGTTTAGAAGTAAATTAATACCTCCAAAAGAAATAAT ACCAATAAATGATGCCAAAATTACAGAGGAATTAAAATTTTGCGGCATTGAATATATTGAAACCCCAGGGCATACTGAGG GAGGAATAACAATAATATATAAAAATTCAATGATTACAGGAGATACGCTATTTGCATATGGCGTTGGAAGATGGGATTTT CCGACTGGAAATATTATTGATTTAAGAAATTCAATAGCAAAATTGGAAGTAATTGCCAACCAAAAAAATATAATTGAAAT ACTACCCGGACATGGTGAAAAAGGAGATTTAAGTGCTTTCAATAATGCCAAATTATTTTTATAA
Upstream 100 bases:
>100_bases TTATTAAATAATTATAAGAATAATGATAATAATATACCTTTTAACGAACAACTTTTTTAACATACTATAATCCAAAATTA GCTAATTCTGAGGGAAAAAT
Downstream 100 bases:
>100_bases TATTTTTATAATAAATTTTTTATGACAACTAAAACTATAACTAAAAACCAATAAAATATCGTGATAATTTATGTTTTCTG CCTTAATACCTGTATCTCCA
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHAGANYLYEEYFNAPVIISDKE LKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKFCGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDF PTGNIIDLRNSIAKLEVIANQKNIIEILPGHGEKGDLSAFNNAKLFL
Sequences:
>Translated_207_residues MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHAGANYLYEEYFNAPVIISDKE LKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKFCGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDF PTGNIIDLRNSIAKLEVIANQKNIIEILPGHGEKGDLSAFNNAKLFL >Mature_207_residues MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHAGANYLYEEYFNAPVIISDKE LKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKFCGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDF PTGNIIDLRNSIAKLEVIANQKNIIEILPGHGEKGDLSAFNNAKLFL
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787158, Length=176, Percent_Identity=28.4090909090909, Blast_Score=64, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320478, Length=191, Percent_Identity=36.6492146596859, Blast_Score=67, Evalue=3e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 23158; Mature: 23158
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHA CEEEECCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC GANYLYEEYFNAPVIISDKELKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKF CCHHHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHCCCCHHEEECCCHHHHHHHHH CGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDFPTGNIIDLRNSIAKLEVIAN CCEEEEECCCCCCCCEEEEEECCEECCCEEEEEECCCCCCCCCCEEHHHHHHEEEEEEEC QKNIIEILPGHGEKGDLSAFNNAKLFL CCCEEEEECCCCCCCCCCCCCCCEEEC >Mature Secondary Structure MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHA CEEEECCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC GANYLYEEYFNAPVIISDKELKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKF CCHHHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHCCCCHHEEECCCHHHHHHHHH CGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDFPTGNIIDLRNSIAKLEVIAN CCEEEEECCCCCCCCEEEEEECCEECCCEEEEEECCCCCCCCCCEEHHHHHHEEEEEEEC QKNIIEILPGHGEKGDLSAFNNAKLFL CCCEEEEECCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]