Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is ycbL [C]

Identifier: 150401087

GI number: 150401087

Start: 677249

End: 677872

Strand: Direct

Name: ycbL [C]

Synonym: Maeo_0657

Alternate gene names: 150401087

Gene position: 677249-677872 (Clockwise)

Preceding gene: 150401086

Following gene: 150401088

Centisome position: 43.15

GC content: 29.97

Gene sequence:

>624_bases
ATGATATATAAATTAAATGGTATCGGACATGACTCTAACAGTTATTTAATTGTTGGAAAAAAGAATATATTAATTGACCC
TGGAACTCCGGGCACTTTTGACTTAATAAGGGGCGAAATAGAACAGATTACAAAAAATATTGATTATATAGTCAATACTC
ACTGCCATTATGACCATGCAGGAGCTAATTATTTATATGAAGAATACTTTAATGCCCCAGTAATTATAAGCGATAAAGAA
TTAAAAGATTTAAAAAACGACACCCCTACAACAGTATCAAAATTGTTTAGAAGTAAATTAATACCTCCAAAAGAAATAAT
ACCAATAAATGATGCCAAAATTACAGAGGAATTAAAATTTTGCGGCATTGAATATATTGAAACCCCAGGGCATACTGAGG
GAGGAATAACAATAATATATAAAAATTCAATGATTACAGGAGATACGCTATTTGCATATGGCGTTGGAAGATGGGATTTT
CCGACTGGAAATATTATTGATTTAAGAAATTCAATAGCAAAATTGGAAGTAATTGCCAACCAAAAAAATATAATTGAAAT
ACTACCCGGACATGGTGAAAAAGGAGATTTAAGTGCTTTCAATAATGCCAAATTATTTTTATAA

Upstream 100 bases:

>100_bases
TTATTAAATAATTATAAGAATAATGATAATAATATACCTTTTAACGAACAACTTTTTTAACATACTATAATCCAAAATTA
GCTAATTCTGAGGGAAAAAT

Downstream 100 bases:

>100_bases
TATTTTTATAATAAATTTTTTATGACAACTAAAACTATAACTAAAAACCAATAAAATATCGTGATAATTTATGTTTTCTG
CCTTAATACCTGTATCTCCA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHAGANYLYEEYFNAPVIISDKE
LKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKFCGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDF
PTGNIIDLRNSIAKLEVIANQKNIIEILPGHGEKGDLSAFNNAKLFL

Sequences:

>Translated_207_residues
MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHAGANYLYEEYFNAPVIISDKE
LKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKFCGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDF
PTGNIIDLRNSIAKLEVIANQKNIIEILPGHGEKGDLSAFNNAKLFL
>Mature_207_residues
MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHAGANYLYEEYFNAPVIISDKE
LKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKFCGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDF
PTGNIIDLRNSIAKLEVIANQKNIIEILPGHGEKGDLSAFNNAKLFL

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787158, Length=176, Percent_Identity=28.4090909090909, Blast_Score=64, Evalue=8e-12,
Organism=Saccharomyces cerevisiae, GI6320478, Length=191, Percent_Identity=36.6492146596859, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001279 [H]

Pfam domain/function: PF00753 Lactamase_B [H]

EC number: NA

Molecular weight: Translated: 23158; Mature: 23158

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHA
CEEEECCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
GANYLYEEYFNAPVIISDKELKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKF
CCHHHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHCCCCHHEEECCCHHHHHHHHH
CGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDFPTGNIIDLRNSIAKLEVIAN
CCEEEEECCCCCCCCEEEEEECCEECCCEEEEEECCCCCCCCCCEEHHHHHHEEEEEEEC
QKNIIEILPGHGEKGDLSAFNNAKLFL
CCCEEEEECCCCCCCCCCCCCCCEEEC
>Mature Secondary Structure
MIYKLNGIGHDSNSYLIVGKKNILIDPGTPGTFDLIRGEIEQITKNIDYIVNTHCHYDHA
CEEEECCCCCCCCCEEEEECCEEEECCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCC
GANYLYEEYFNAPVIISDKELKDLKNDTPTTVSKLFRSKLIPPKEIIPINDAKITEELKF
CCHHHHHHHCCCCEEEECHHHHHHCCCCCHHHHHHHHHHCCCCHHEEECCCHHHHHHHHH
CGIEYIETPGHTEGGITIIYKNSMITGDTLFAYGVGRWDFPTGNIIDLRNSIAKLEVIAN
CCEEEEECCCCCCCCEEEEEECCEECCCEEEEEECCCCCCCCCCEEHHHHHHEEEEEEEC
QKNIIEILPGHGEKGDLSAFNNAKLFL
CCCEEEEECCCCCCCCCCCCCCCEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]