Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is yvdA [H]

Identifier: 150401010

GI number: 150401010

Start: 599177

End: 599629

Strand: Reverse

Name: yvdA [H]

Synonym: Maeo_0579

Alternate gene names: 150401010

Gene position: 599629-599177 (Counterclockwise)

Preceding gene: 150401011

Following gene: 150401009

Centisome position: 38.21

GC content: 34.44

Gene sequence:

>453_bases
TTGAGTGACGATGCAAAGCCTAAGAAAAAACTTGCAATTATTAGTTGCATGGATACCAGGTTGGTTAATTTTCTTTCTGA
AAAACTAGGAATAGATCGAGGAGATGCCAAAGTAATTAAAAATGCAGGAAATATGATAATGGACGATACATTGAGATCAC
TTGTGGTAGCCATATACCTACTTGATGTGGATAAAATCATGGTAGTCGGACATACGGACTGCGGAATGAAATCAGTTGAT
GTCAATGATGTCAAAAATAAAATGCTTGAAAGAGGGGCAAATCCATATTTCACTCCGAATTTAGAGCAATGGCTTGGCAA
AATTGATTCTGAGGAAGATAATATCATTAAGGGAGTAGATTTAATAAAAAACCATCCAGCAATTCCAAAAAATATGGATG
TTCGAGGATATATATTGGATATTGATACAGGAAGTCTAAACCAATTATGTTAA

Upstream 100 bases:

>100_bases
TTTAATCTATGTATATGTCCAAATATGTAATCTATAATATGTAATACAATAAATTATATACTATAAACACAAAAACCATA
TATATGCTGGAGGTTATACT

Downstream 100 bases:

>100_bases
TATAAATAATGTGTATGAAGCATTTGCCGACACACACATATATATGAGTCACCATAGATACATAAATACTTTTTATTTAA
ATATTTATTTTGAATATTTA

Product: carbonic anhydrase

Products: NA

Alternate protein names: Carbonate dehydratase [H]

Number of amino acids: Translated: 150; Mature: 149

Protein sequence:

>150_residues
MSDDAKPKKKLAIISCMDTRLVNFLSEKLGIDRGDAKVIKNAGNMIMDDTLRSLVVAIYLLDVDKIMVVGHTDCGMKSVD
VNDVKNKMLERGANPYFTPNLEQWLGKIDSEEDNIIKGVDLIKNHPAIPKNMDVRGYILDIDTGSLNQLC

Sequences:

>Translated_150_residues
MSDDAKPKKKLAIISCMDTRLVNFLSEKLGIDRGDAKVIKNAGNMIMDDTLRSLVVAIYLLDVDKIMVVGHTDCGMKSVD
VNDVKNKMLERGANPYFTPNLEQWLGKIDSEEDNIIKGVDLIKNHPAIPKNMDVRGYILDIDTGSLNQLC
>Mature_149_residues
SDDAKPKKKLAIISCMDTRLVNFLSEKLGIDRGDAKVIKNAGNMIMDDTLRSLVVAIYLLDVDKIMVVGHTDCGMKSVDV
NDVKNKMLERGANPYFTPNLEQWLGKIDSEEDNIIKGVDLIKNHPAIPKNMDVRGYILDIDTGSLNQLC

Specific function: Reversible hydration of carbon dioxide [H]

COG id: COG0288

COG function: function code P; Carbonic anhydrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the beta-class carbonic anhydrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001765 [H]

Pfam domain/function: PF00484 Pro_CA [H]

EC number: =4.2.1.1 [H]

Molecular weight: Translated: 16694; Mature: 16562

Theoretical pI: Translated: 5.25; Mature: 5.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
5.3 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
6.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDDAKPKKKLAIISCMDTRLVNFLSEKLGIDRGDAKVIKNAGNMIMDDTLRSLVVAIYL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
LDVDKIMVVGHTDCGMKSVDVNDVKNKMLERGANPYFTPNLEQWLGKIDSEEDNIIKGVD
HHHCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHH
LIKNHPAIPKNMDVRGYILDIDTGSLNQLC
HHHCCCCCCCCCCCEEEEEEECCCCCCCCC
>Mature Secondary Structure 
SDDAKPKKKLAIISCMDTRLVNFLSEKLGIDRGDAKVIKNAGNMIMDDTLRSLVVAIYL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHH
LDVDKIMVVGHTDCGMKSVDVNDVKNKMLERGANPYFTPNLEQWLGKIDSEEDNIIKGVD
HHHCEEEEEECCCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCCHHHHHH
LIKNHPAIPKNMDVRGYILDIDTGSLNQLC
HHHCCCCCCCCCCCEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]