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The map label for this gene is yifB [C]

Identifier: 150400922

GI number: 150400922

Start: 512668

End: 514821

Strand: Direct

Name: yifB [C]

Synonym: Maeo_0490

Alternate gene names: 150400922

Gene position: 512668-514821 (Clockwise)

Preceding gene: 150400921

Following gene: 150400927

Centisome position: 32.66

GC content: 31.48

Gene sequence:

>2154_bases
ATGGTTAAAACAGATATAAAATTAGATTTTGATGAAGAAGAATTTTTAAACAAATATGAAAATAAGATAAAGCAATACAT
AAAAAATATTCTCTCCTCTAATTCTATAAATAATAACATTTTTGAATTTGATATTGAAGATTTTTTAAGTAGTTATCCGG
AAATTTGTGAAATTAATGATATAATAATAGAACAACCAACACAGATCGAAGGAACAATTTTTTATATTTTTAAAGATACA
TATATGGAGCTCTATGGAGATGATGAAAAAACTTCAAAAGAATTGGAAAAATACCAAATAGCATTTAAAAAACCGCTGGG
TTGCGATAAAAAAATAGATGAAATAAACTCCGCAGATATAAATAAATTGGTAGATTTTGAAGGAAATATAATAAAAGCAG
CAAAAGTATGTGCATTATTGAAAAAGGCATGTTTTGTATGTAGAAATTGTGGAAATATATCTTATAAAACTATTCATGAT
TATTTTACATTTCCAAAGAGATTTTGTGATAATAAAAATTGTGGAGCAGAAATGTCATTGGACTTAAACAGCTCTTCCTA
TATAAATATACAGGAATTGGAAATTCAGCAACCCATAGACATTATGAAAAATCCAGATGACCCACCACGAAGTATAAGGG
CATTTCTTGAAAACTCCGACGGAATATACTCTGGAAGGGTGGATGTAGTTGGAACAGTGATGAAAAAATTTACAAAACCA
AATATGCCAGTTTTTGAGATATATGTAAAGAGCAACCATATAAAATTAAATGAAAGTTTTCAAAAAATAGAGGTAAGAGA
TATAATATCCAACACCGAATTAATGGAAACTATGAATGAATTGGGTAAAAAGAAAAATATTGTTGAAATATTATCTCACT
ATCTCATACCACAAATAAAAGGGTATGAAATGGTTAAAAAATCAATATTTTTACAGCAAATAAAAGGATGCACAAAATTT
TTACCAGATGGTTCTCAATTGAGAAAGGATAGCCATATACTTCTTATAACAGACCCAGGAATTGGAAAATCTACAATGTT
AAGAAAAATAGCCAGACTATTTCCACAAAACGCTTATGCTTCGGTTACCACTGCAACGGGCGGGGGACTTACGGCTAATG
TGGTGAGAGAAAGCACGGAAATAGGAGATGGCTGGGTTGTAAAGCCAGGGGTATTTGTTAGGGCTAATGAGGGAACGGCA
TGTATTGATGAGCTTACCGTTGAAAGAAATATTATGAAATATATTCTTGAAGCTATGGAATCCCAAACCATACATATTAA
TAAAGGAGGGATAAATGTAAAATTACCTACAAAATGTGCTGTTCTTGCGGCATGTAATCCAAAACGGGGAAGATTTGATT
CAAATTTGGGCGTAATTGAACAAATAAATGTCCCATCCCCTCTTCTTAGTAGATTTGATTTAATATTTCCATTGAAGGAT
ATACCCGATAAAAAAAGAGATGAAGAAATAGCCGAACATATTTTAAATACCCATATTGAAACAGCTACCAAAGATTATAA
ATTATTAAGCTCGGTAGAAATAGACGGCATTACTGTTAATGAAGAGTTAATAAAAAATTATATAATATATTCTCGGACTT
GTGCTTATTTTGAGGAAAACCATTCTTTATTTAGAAGTGATACCGTAGATGAGAAAAAATTAAAAAATCCACATCTCACA
AAATCGGCAAAAAAATTAATAAAAAATTATTATATAGATATGCGAAAATTGGGGGAAGGGGACAATCCAATCCCCGTAAC
CGCCAGACAGCTGGAGGCGGCAATAAGAATATCGGAAATGCATGCCAAAGCAAGACTATCAAAAAAAGTCGAGGAAATTG
ATGCAAAAGTTGCAATTGGTATTATTGAGGAATGTTTAAACCAAGTTGCATATGACCCCGAGACTGGAAAATATGATATT
GGTAAAGCCATGGGACAGCTACCAAAATCAAAAATGGATAAAATGGATAAAATAGTTGATATAATCAGGGAGCTCCAAGC
ATTATCAGATAACAAATTAGCTTATGAGCAGGATATAACTGAAAAAGCTTTTGAGTTTGGAATATCTGAAAAAGAAGTTG
AGGATGCACTGGAAAAATTGAAAAAAAGTGCAGATATTTATTCTCCAAAGTTCGGATACTACAAAGTCTCGTAG

Upstream 100 bases:

>100_bases
CTATATAATAAAAAAAGAAATATGCCCAATAATTAGGACGGATTAGGGACAATTATTGAACTTACTATATTCAGGAGCTC
CGACTAAAATATGTGATATC

Downstream 100 bases:

>100_bases
AGACTTTGTAGGTCAATAACTCTGAAAGAGTTATTGCAGACTATAAAGTCTCATAAAGAGGTTATAGGTCAATAACTCTG
AAAGAGTTATTGCAGACTAT

Product: MCM family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 717; Mature: 717

Protein sequence:

>717_residues
MVKTDIKLDFDEEEFLNKYENKIKQYIKNILSSNSINNNIFEFDIEDFLSSYPEICEINDIIIEQPTQIEGTIFYIFKDT
YMELYGDDEKTSKELEKYQIAFKKPLGCDKKIDEINSADINKLVDFEGNIIKAAKVCALLKKACFVCRNCGNISYKTIHD
YFTFPKRFCDNKNCGAEMSLDLNSSSYINIQELEIQQPIDIMKNPDDPPRSIRAFLENSDGIYSGRVDVVGTVMKKFTKP
NMPVFEIYVKSNHIKLNESFQKIEVRDIISNTELMETMNELGKKKNIVEILSHYLIPQIKGYEMVKKSIFLQQIKGCTKF
LPDGSQLRKDSHILLITDPGIGKSTMLRKIARLFPQNAYASVTTATGGGLTANVVRESTEIGDGWVVKPGVFVRANEGTA
CIDELTVERNIMKYILEAMESQTIHINKGGINVKLPTKCAVLAACNPKRGRFDSNLGVIEQINVPSPLLSRFDLIFPLKD
IPDKKRDEEIAEHILNTHIETATKDYKLLSSVEIDGITVNEELIKNYIIYSRTCAYFEENHSLFRSDTVDEKKLKNPHLT
KSAKKLIKNYYIDMRKLGEGDNPIPVTARQLEAAIRISEMHAKARLSKKVEEIDAKVAIGIIEECLNQVAYDPETGKYDI
GKAMGQLPKSKMDKMDKIVDIIRELQALSDNKLAYEQDITEKAFEFGISEKEVEDALEKLKKSADIYSPKFGYYKVS

Sequences:

>Translated_717_residues
MVKTDIKLDFDEEEFLNKYENKIKQYIKNILSSNSINNNIFEFDIEDFLSSYPEICEINDIIIEQPTQIEGTIFYIFKDT
YMELYGDDEKTSKELEKYQIAFKKPLGCDKKIDEINSADINKLVDFEGNIIKAAKVCALLKKACFVCRNCGNISYKTIHD
YFTFPKRFCDNKNCGAEMSLDLNSSSYINIQELEIQQPIDIMKNPDDPPRSIRAFLENSDGIYSGRVDVVGTVMKKFTKP
NMPVFEIYVKSNHIKLNESFQKIEVRDIISNTELMETMNELGKKKNIVEILSHYLIPQIKGYEMVKKSIFLQQIKGCTKF
LPDGSQLRKDSHILLITDPGIGKSTMLRKIARLFPQNAYASVTTATGGGLTANVVRESTEIGDGWVVKPGVFVRANEGTA
CIDELTVERNIMKYILEAMESQTIHINKGGINVKLPTKCAVLAACNPKRGRFDSNLGVIEQINVPSPLLSRFDLIFPLKD
IPDKKRDEEIAEHILNTHIETATKDYKLLSSVEIDGITVNEELIKNYIIYSRTCAYFEENHSLFRSDTVDEKKLKNPHLT
KSAKKLIKNYYIDMRKLGEGDNPIPVTARQLEAAIRISEMHAKARLSKKVEEIDAKVAIGIIEECLNQVAYDPETGKYDI
GKAMGQLPKSKMDKMDKIVDIIRELQALSDNKLAYEQDITEKAFEFGISEKEVEDALEKLKKSADIYSPKFGYYKVS
>Mature_717_residues
MVKTDIKLDFDEEEFLNKYENKIKQYIKNILSSNSINNNIFEFDIEDFLSSYPEICEINDIIIEQPTQIEGTIFYIFKDT
YMELYGDDEKTSKELEKYQIAFKKPLGCDKKIDEINSADINKLVDFEGNIIKAAKVCALLKKACFVCRNCGNISYKTIHD
YFTFPKRFCDNKNCGAEMSLDLNSSSYINIQELEIQQPIDIMKNPDDPPRSIRAFLENSDGIYSGRVDVVGTVMKKFTKP
NMPVFEIYVKSNHIKLNESFQKIEVRDIISNTELMETMNELGKKKNIVEILSHYLIPQIKGYEMVKKSIFLQQIKGCTKF
LPDGSQLRKDSHILLITDPGIGKSTMLRKIARLFPQNAYASVTTATGGGLTANVVRESTEIGDGWVVKPGVFVRANEGTA
CIDELTVERNIMKYILEAMESQTIHINKGGINVKLPTKCAVLAACNPKRGRFDSNLGVIEQINVPSPLLSRFDLIFPLKD
IPDKKRDEEIAEHILNTHIETATKDYKLLSSVEIDGITVNEELIKNYIIYSRTCAYFEENHSLFRSDTVDEKKLKNPHLT
KSAKKLIKNYYIDMRKLGEGDNPIPVTARQLEAAIRISEMHAKARLSKKVEEIDAKVAIGIIEECLNQVAYDPETGKYDI
GKAMGQLPKSKMDKMDKIVDIIRELQALSDNKLAYEQDITEKAFEFGISEKEVEDALEKLKKSADIYSPKFGYYKVS

Specific function: Unknown

COG id: COG1241

COG function: function code L; Predicted ATPase involved in replication control, Cdc46/Mcm family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 MCM domain [H]

Homologues:

Organism=Homo sapiens, GI33469919, Length=616, Percent_Identity=28.7337662337662, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI33469917, Length=616, Percent_Identity=28.7337662337662, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI33469968, Length=605, Percent_Identity=26.6115702479339, Blast_Score=187, Evalue=3e-47,
Organism=Homo sapiens, GI23510448, Length=648, Percent_Identity=26.5432098765432, Blast_Score=184, Evalue=3e-46,
Organism=Homo sapiens, GI19923727, Length=614, Percent_Identity=25.2442996742671, Blast_Score=181, Evalue=2e-45,
Organism=Homo sapiens, GI33469924, Length=550, Percent_Identity=26.3636363636364, Blast_Score=172, Evalue=1e-42,
Organism=Homo sapiens, GI33469922, Length=497, Percent_Identity=28.7726358148893, Blast_Score=171, Evalue=2e-42,
Organism=Homo sapiens, GI6631095, Length=362, Percent_Identity=32.5966850828729, Blast_Score=165, Evalue=2e-40,
Organism=Homo sapiens, GI7427519, Length=589, Percent_Identity=24.9575551782683, Blast_Score=162, Evalue=7e-40,
Organism=Homo sapiens, GI33356547, Length=603, Percent_Identity=25.0414593698176, Blast_Score=162, Evalue=9e-40,
Organism=Homo sapiens, GI310115110, Length=263, Percent_Identity=31.1787072243346, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI310128402, Length=263, Percent_Identity=31.1787072243346, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI310119838, Length=263, Percent_Identity=31.1787072243346, Blast_Score=94, Evalue=4e-19,
Organism=Homo sapiens, GI23397546, Length=280, Percent_Identity=23.2142857142857, Blast_Score=74, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17508417, Length=542, Percent_Identity=27.6752767527675, Blast_Score=200, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI17554306, Length=563, Percent_Identity=28.5968028419183, Blast_Score=184, Evalue=1e-46,
Organism=Caenorhabditis elegans, GI17562700, Length=570, Percent_Identity=29.6491228070175, Blast_Score=183, Evalue=3e-46,
Organism=Caenorhabditis elegans, GI71997752, Length=636, Percent_Identity=26.2578616352201, Blast_Score=177, Evalue=3e-44,
Organism=Caenorhabditis elegans, GI17562702, Length=633, Percent_Identity=24.6445497630332, Blast_Score=171, Evalue=1e-42,
Organism=Caenorhabditis elegans, GI71997563, Length=566, Percent_Identity=26.1484098939929, Blast_Score=164, Evalue=2e-40,
Organism=Caenorhabditis elegans, GI71997571, Length=349, Percent_Identity=29.512893982808, Blast_Score=130, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6325276, Length=739, Percent_Identity=26.7929634641407, Blast_Score=224, Evalue=4e-59,
Organism=Saccharomyces cerevisiae, GI6323304, Length=583, Percent_Identity=27.958833619211, Blast_Score=184, Evalue=4e-47,
Organism=Saccharomyces cerevisiae, GI6319448, Length=557, Percent_Identity=25.673249551167, Blast_Score=169, Evalue=1e-42,
Organism=Saccharomyces cerevisiae, GI6319679, Length=599, Percent_Identity=26.5442404006678, Blast_Score=166, Evalue=1e-41,
Organism=Saccharomyces cerevisiae, GI6321237, Length=340, Percent_Identity=33.2352941176471, Blast_Score=165, Evalue=3e-41,
Organism=Saccharomyces cerevisiae, GI6320803, Length=426, Percent_Identity=29.81220657277, Blast_Score=164, Evalue=4e-41,
Organism=Drosophila melanogaster, GI17137242, Length=647, Percent_Identity=28.5935085007728, Blast_Score=216, Evalue=5e-56,
Organism=Drosophila melanogaster, GI24645774, Length=641, Percent_Identity=29.6411856474259, Blast_Score=195, Evalue=8e-50,
Organism=Drosophila melanogaster, GI17137132, Length=634, Percent_Identity=24.6056782334385, Blast_Score=181, Evalue=1e-45,
Organism=Drosophila melanogaster, GI17647617, Length=661, Percent_Identity=25.5673222390318, Blast_Score=174, Evalue=1e-43,
Organism=Drosophila melanogaster, GI24639835, Length=542, Percent_Identity=28.2287822878229, Blast_Score=173, Evalue=5e-43,
Organism=Drosophila melanogaster, GI17530827, Length=355, Percent_Identity=29.8591549295775, Blast_Score=155, Evalue=1e-37,
Organism=Drosophila melanogaster, GI24647251, Length=403, Percent_Identity=20.5955334987593, Blast_Score=86, Evalue=8e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001208
- InterPro:   IPR018525
- InterPro:   IPR012340
- InterPro:   IPR016027 [H]

Pfam domain/function: PF00493 MCM [H]

EC number: NA

Molecular weight: Translated: 81639; Mature: 81639

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00847 MCM_1 ; PS50051 MCM_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKTDIKLDFDEEEFLNKYENKIKQYIKNILSSNSINNNIFEFDIEDFLSSYPEICEIND
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCH
IIIEQPTQIEGTIFYIFKDTYMELYGDDEKTSKELEKYQIAFKKPLGCDKKIDEINSADI
HEECCCCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCH
NKLVDFEGNIIKAAKVCALLKKACFVCRNCGNISYKTIHDYFTFPKRFCDNKNCGAEMSL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
DLNSSSYINIQELEIQQPIDIMKNPDDPPRSIRAFLENSDGIYSGRVDVVGTVMKKFTKP
ECCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCC
NMPVFEIYVKSNHIKLNESFQKIEVRDIISNTELMETMNELGKKKNIVEILSHYLIPQIK
CCCEEEEEEECCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GYEMVKKSIFLQQIKGCTKFLPDGSQLRKDSHILLITDPGIGKSTMLRKIARLFPQNAYA
CHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCE
SVTTATGGGLTANVVRESTEIGDGWVVKPGVFVRANEGTACIDELTVERNIMKYILEAME
EEEECCCCCEEHHHHHHCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
SQTIHINKGGINVKLPTKCAVLAACNPKRGRFDSNLGVIEQINVPSPLLSRFDLIFPLKD
CCEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCC
IPDKKRDEEIAEHILNTHIETATKDYKLLSSVEIDGITVNEELIKNYIIYSRTCAYFEEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCEEECHHHHHHHHHHHHHHHHHHHC
HSLFRSDTVDEKKLKNPHLTKSAKKLIKNYYIDMRKLGEGDNPIPVTARQLEAAIRISEM
CCHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
HAKARLSKKVEEIDAKVAIGIIEECLNQVAYDPETGKYDIGKAMGQLPKSKMDKMDKIVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
IIRELQALSDNKLAYEQDITEKAFEFGISEKEVEDALEKLKKSADIYSPKFGYYKVS
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECC
>Mature Secondary Structure
MVKTDIKLDFDEEEFLNKYENKIKQYIKNILSSNSINNNIFEFDIEDFLSSYPEICEIND
CCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEHHHHHHCCCCCCCCCH
IIIEQPTQIEGTIFYIFKDTYMELYGDDEKTSKELEKYQIAFKKPLGCDKKIDEINSADI
HEECCCCCCCCEEEEEEECHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCH
NKLVDFEGNIIKAAKVCALLKKACFVCRNCGNISYKTIHDYFTFPKRFCDNKNCGAEMSL
HHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEE
DLNSSSYINIQELEIQQPIDIMKNPDDPPRSIRAFLENSDGIYSGRVDVVGTVMKKFTKP
ECCCCCEEEEEECCCCCCHHHHCCCCCCHHHHHHHHCCCCCEECCCHHHHHHHHHHHCCC
NMPVFEIYVKSNHIKLNESFQKIEVRDIISNTELMETMNELGKKKNIVEILSHYLIPQIK
CCCEEEEEEECCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHCCCCC
GYEMVKKSIFLQQIKGCTKFLPDGSQLRKDSHILLITDPGIGKSTMLRKIARLFPQNAYA
CHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCE
SVTTATGGGLTANVVRESTEIGDGWVVKPGVFVRANEGTACIDELTVERNIMKYILEAME
EEEECCCCCEEHHHHHHCCCCCCCEEECCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHC
SQTIHINKGGINVKLPTKCAVLAACNPKRGRFDSNLGVIEQINVPSPLLSRFDLIFPLKD
CCEEEEECCCEEEECCCCEEEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHCCCCC
IPDKKRDEEIAEHILNTHIETATKDYKLLSSVEIDGITVNEELIKNYIIYSRTCAYFEEN
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCEEECHHHHHHHHHHHHHHHHHHHC
HSLFRSDTVDEKKLKNPHLTKSAKKLIKNYYIDMRKLGEGDNPIPVTARQLEAAIRISEM
CCHHHCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHH
HAKARLSKKVEEIDAKVAIGIIEECLNQVAYDPETGKYDIGKAMGQLPKSKMDKMDKIVD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
IIRELQALSDNKLAYEQDITEKAFEFGISEKEVEDALEKLKKSADIYSPKFGYYKVS
HHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]