| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is porB [H]
Identifier: 150400897
GI number: 150400897
Start: 485869
End: 486762
Strand: Direct
Name: porB [H]
Synonym: Maeo_0465
Alternate gene names: 150400897
Gene position: 485869-486762 (Clockwise)
Preceding gene: 150400896
Following gene: 150400898
Centisome position: 30.96
GC content: 35.68
Gene sequence:
>894_bases ATGAAAATCACAGATATTCCAAAAGAAGAATATTTAGCACCAGGAGCAAGAGCCTGTGCTGGATGCCCAGAACTTCTTGC TTTAAGGTTGGCTTTAAAAATATGTGGAGAAGACACAATTGTTGTTGCACCTACTGGATGTATGGAAGTTATTACTACAA TATATCCTGAAACTGCCTGGCGAGTGCCATTTATACATGTTGCATTTGAAAATGCCGCTGCTGTTGCAAGTGGCATAGAA AATGCCATGAAAAGAAAGGGTAAAAAGACAAATATTGTAGTATTTGCAGGAGATGGAGCTACCGCAGATATTGGTTTTCA ATCATTATCGGGAGCCATAGAGCGAGAGCATAATATATTATACATATGCACAGATAATGAGGCATATGCAAATACTGGAA AACAGAGAAGTGGAACCACACCTTATGGGGCATCAACAACTACCAGTCCTGCTGGAAAATACAGTATTGGAAAGCCAGAA GAAAAAAAGAATATGCCTTTTATCGTGGCTGCCCATGGAGCTCCCTATATTGCTACTGCATCAATAGGCTACCCATTTGA CTTTCTAAAAAAAGTGAAAAAGGCATTATCAATTAAGGGATTTAAATATCTCCATGTCCATGCCCCATGCCCTACTGGAT GGGGATTTCATAGTAAAGATGGAATAAAAATTGCAAAATTAGCTGTTCAATCTGGATTATGGACACTTTATGAAATTGAA AATAAAAAATTTAAGATGAACTATAAAAACAAAAAAATACCTGTGAAGGATTATTTAAATATTCAGAAAAGATTTAAACA CCTTTCAGACATTGAAATTGAGCATATACAGAAAAGAACAGATACTAGCTGGGAGGAATTGTTAGAACACAACAATAAAA AAATCTTAATTTAA
Upstream 100 bases:
>100_bases GACTTGGCGGTAGAGATGTAACTTATGACAATTTTAGAACCATATTTAAGTTATTAGGGGACAATAATTCAAAAGAAATT ACTTGGGTGGGTGTTAATCT
Downstream 100 bases:
>100_bases TTATTTCTTATTTATTTAAATATCCAATATTTTGGAAAATTATTTATTATTTACTACTAATTTTTAAGCTCAATACATTT ACTCAGGTATTAGTCAATAA
Product: thiamine pyrophosphate binding domain-containing protein
Products: NA
Alternate protein names: Pyruvate oxidoreductase beta chain; POR; Pyruvic-ferredoxin oxidoreductase subunit beta [H]
Number of amino acids: Translated: 297; Mature: 297
Protein sequence:
>297_residues MKITDIPKEEYLAPGARACAGCPELLALRLALKICGEDTIVVAPTGCMEVITTIYPETAWRVPFIHVAFENAAAVASGIE NAMKRKGKKTNIVVFAGDGATADIGFQSLSGAIEREHNILYICTDNEAYANTGKQRSGTTPYGASTTTSPAGKYSIGKPE EKKNMPFIVAAHGAPYIATASIGYPFDFLKKVKKALSIKGFKYLHVHAPCPTGWGFHSKDGIKIAKLAVQSGLWTLYEIE NKKFKMNYKNKKIPVKDYLNIQKRFKHLSDIEIEHIQKRTDTSWEELLEHNNKKILI
Sequences:
>Translated_297_residues MKITDIPKEEYLAPGARACAGCPELLALRLALKICGEDTIVVAPTGCMEVITTIYPETAWRVPFIHVAFENAAAVASGIE NAMKRKGKKTNIVVFAGDGATADIGFQSLSGAIEREHNILYICTDNEAYANTGKQRSGTTPYGASTTTSPAGKYSIGKPE EKKNMPFIVAAHGAPYIATASIGYPFDFLKKVKKALSIKGFKYLHVHAPCPTGWGFHSKDGIKIAKLAVQSGLWTLYEIE NKKFKMNYKNKKIPVKDYLNIQKRFKHLSDIEIEHIQKRTDTSWEELLEHNNKKILI >Mature_297_residues MKITDIPKEEYLAPGARACAGCPELLALRLALKICGEDTIVVAPTGCMEVITTIYPETAWRVPFIHVAFENAAAVASGIE NAMKRKGKKTNIVVFAGDGATADIGFQSLSGAIEREHNILYICTDNEAYANTGKQRSGTTPYGASTTTSPAGKYSIGKPE EKKNMPFIVAAHGAPYIATASIGYPFDFLKKVKKALSIKGFKYLHVHAPCPTGWGFHSKDGIKIAKLAVQSGLWTLYEIE NKKFKMNYKNKKIPVKDYLNIQKRFKHLSDIEIEHIQKRTDTSWEELLEHNNKKILI
Specific function: Oxidoreductase Required For The Transfer Of Electrons From Pyruvate To Flavodoxin (Potential). [C]
COG id: COG1013
COG function: function code C; Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011766 [H]
Pfam domain/function: PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.1 [H]
Molecular weight: Translated: 32862; Mature: 32862
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKITDIPKEEYLAPGARACAGCPELLALRLALKICGEDTIVVAPTGCMEVITTIYPETAW CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCC RVPFIHVAFENAAAVASGIENAMKRKGKKTNIVVFAGDGATADIGFQSLSGAIEREHNIL CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEE YICTDNEAYANTGKQRSGTTPYGASTTTSPAGKYSIGKPEEKKNMPFIVAAHGAPYIATA EEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCEEEEE SIGYPFDFLKKVKKALSIKGFKYLHVHAPCPTGWGFHSKDGIKIAKLAVQSGLWTLYEIE CCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC NKKFKMNYKNKKIPVKDYLNIQKRFKHLSDIEIEHIQKRTDTSWEELLEHNNKKILI CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCCCEEEC >Mature Secondary Structure MKITDIPKEEYLAPGARACAGCPELLALRLALKICGEDTIVVAPTGCMEVITTIYPETAW CCCCCCCHHHHCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHCCCCCC RVPFIHVAFENAAAVASGIENAMKRKGKKTNIVVFAGDGATADIGFQSLSGAIEREHNIL CCCEEEEEECCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHCCCCCEE YICTDNEAYANTGKQRSGTTPYGASTTTSPAGKYSIGKPEEKKNMPFIVAAHGAPYIATA EEECCCCHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEECCCCEEEEE SIGYPFDFLKKVKKALSIKGFKYLHVHAPCPTGWGFHSKDGIKIAKLAVQSGLWTLYEIE CCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCEEEEEEC NKKFKMNYKNKKIPVKDYLNIQKRFKHLSDIEIEHIQKRTDTSWEELLEHNNKKILI CCEEEECCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHCCCCHHHHHHCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]