| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is aroE
Identifier: 150400882
GI number: 150400882
Start: 472656
End: 473492
Strand: Reverse
Name: aroE
Synonym: Maeo_0450
Alternate gene names: 150400882
Gene position: 473492-472656 (Counterclockwise)
Preceding gene: 150400903
Following gene: 150400881
Centisome position: 30.17
GC content: 29.87
Gene sequence:
>837_bases ATGATAAACTCAAAAACAAAACTATTAGGACTTATTGGACATCCCGTGGAACATTCGTTATCTCCAACAATGCATAATGA AGCCATAAAAGATAAAGATTTAAATTATGTATATTTGGCTTTTGATGTAGAATCAGAAAATTTAAAAGATGTGGTTAATG GTGCAAAAGCCATAGGCTGGAAAGGGTTTAACATCACAATACCCCATAAAATAGAAATAATGAAATATCTTGATAAAATT GACAACGATGCAAAATTAATTGGTGCTGTAAATACTGTAAAAATAGAAAATAATAAAGCAATAGGATATAATACGGACGG AATAGGGGCCCGGCTATCAATTGAAGAAATAATAGGGGAAGTAAAAGATTATAATATTTTAGTAATTGGAGCAGGAGGTT CTTCTCGTGCAGTGTGTTGCGAATTAGCCAAAAACAATAATTTGACCATAATAAATAGGACAGTTGAAAAAGCAGAAATA ATAGCAAATGATTTGTCCAATAAATTAAATAATGCCGTATATTATGGGGGATTAAATCACAATTACAACATGGCAAATTT TGATATTATAATAAATACAACTTCTTTGGGAATGTATCCTAATGTCGATAATAAACCACCAATAAGCATGCAAAATATCA AAAAAGATGCAGTTGTAATGGATTTAATATACAATCCAAAAGAAACGCTATTTTTAAAAGAGGCAAAGGAAAAAGGTTGC GCCACAATAAATGGGCTTGGTATGTTAATTTATCAAGGTGCAAAATCTTTTGAAATATGGACTGGTGTAAAACCCGATAT AAATATTATGAAAAATGCAATAATTGATATATTATAA
Upstream 100 bases:
>100_bases TATGTGGTAAAATTGATTTATCCTAATATGGCGTATTATATAATATATATAATAAAAATATAACCTAATAATATAGATAA AAAGAAAGGAAGGCATAATA
Downstream 100 bases:
>100_bases TAAATATATATGGTAAAAGCGAAATATATCAATAAAGTATATATACTTAAAAAAACAGGTATTTAATACAGTCTACACCA CAATAAACATATACATATAT
Product: shikimate 5-dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 278; Mature: 278
Protein sequence:
>278_residues MINSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWKGFNITIPHKIEIMKYLDKI DNDAKLIGAVNTVKIENNKAIGYNTDGIGARLSIEEIIGEVKDYNILVIGAGGSSRAVCCELAKNNNLTIINRTVEKAEI IANDLSNKLNNAVYYGGLNHNYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYNPKETLFLKEAKEKGC ATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAIIDIL
Sequences:
>Translated_278_residues MINSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWKGFNITIPHKIEIMKYLDKI DNDAKLIGAVNTVKIENNKAIGYNTDGIGARLSIEEIIGEVKDYNILVIGAGGSSRAVCCELAKNNNLTIINRTVEKAEI IANDLSNKLNNAVYYGGLNHNYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYNPKETLFLKEAKEKGC ATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAIIDIL >Mature_278_residues MINSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGWKGFNITIPHKIEIMKYLDKI DNDAKLIGAVNTVKIENNKAIGYNTDGIGARLSIEEIIGEVKDYNILVIGAGGSSRAVCCELAKNNNLTIINRTVEKAEI IANDLSNKLNNAVYYGGLNHNYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYNPKETLFLKEAKEKGC ATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAIIDIL
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; fourth step. [C]
COG id: COG0169
COG function: function code E; Shikimate 5-dehydrogenase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the shikimate dehydrogenase family
Homologues:
Organism=Escherichia coli, GI1787983, Length=270, Percent_Identity=32.5925925925926, Blast_Score=160, Evalue=1e-40, Organism=Escherichia coli, GI1789675, Length=261, Percent_Identity=32.5670498084291, Blast_Score=129, Evalue=3e-31, Organism=Saccharomyces cerevisiae, GI6320332, Length=288, Percent_Identity=29.5138888888889, Blast_Score=97, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): AROE_META3 (A6UU64)
Other databases:
- EMBL: CP000743 - RefSeq: YP_001324648.1 - ProteinModelPortal: A6UU64 - SMR: A6UU64 - STRING: A6UU64 - GeneID: 5326852 - GenomeReviews: CP000743_GR - KEGG: mae:Maeo_0450 - eggNOG: arNOG05588 - HOGENOM: HBG553408 - OMA: GYNTDAS - ProtClustDB: PRK00258 - BioCyc: MAEO419665:MAEO_0450-MONOMER - GO: GO:0005737 - HAMAP: MF_00222 - InterPro: IPR016040 - InterPro: IPR011342 - InterPro: IPR013708 - InterPro: IPR022893 - InterPro: IPR006151 - Gene3D: G3DSA:3.40.50.720 - TIGRFAMs: TIGR00507
Pfam domain/function: PF01488 Shikimate_DH; PF08501 Shikimate_dh_N
EC number: =1.1.1.25
Molecular weight: Translated: 30672; Mature: 30672
Theoretical pI: Translated: 6.68; Mature: 6.68
Prosite motif: NA
Important sites: ACT_SITE 70-70
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MINSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGW CCCCCCEEEEEECCCHHHCCCCCHHCHHHCCCCCCEEEEEEEECCCHHHHHHCCHHHCCC KGFNITIPHKIEIMKYLDKIDNDAKLIGAVNTVKIENNKAIGYNTDGIGARLSIEEIIGE CCCEEECCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEECCCCCCCEEEHHHHHHH VKDYNILVIGAGGSSRAVCCELAKNNNLTIINRTVEKAEIIANDLSNKLNNAVYYGGLNH HCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCC NYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYNPKETLFLKEAKEKGC CCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCHHEEEEHHHHCCC ATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAIIDIL EEECCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCC >Mature Secondary Structure MINSKTKLLGLIGHPVEHSLSPTMHNEAIKDKDLNYVYLAFDVESENLKDVVNGAKAIGW CCCCCCEEEEEECCCHHHCCCCCHHCHHHCCCCCCEEEEEEEECCCHHHHHHCCHHHCCC KGFNITIPHKIEIMKYLDKIDNDAKLIGAVNTVKIENNKAIGYNTDGIGARLSIEEIIGE CCCEEECCCHHHHHHHHHHCCCCCEEEEEEEEEEEECCEEEEECCCCCCCEEEHHHHHHH VKDYNILVIGAGGSSRAVCCELAKNNNLTIINRTVEKAEIIANDLSNKLNNAVYYGGLNH HCCCEEEEEECCCCCCEEEEEECCCCCEEEEECCHHHHHHHHHHHHHHHCCEEEECCCCC NYNMANFDIIINTTSLGMYPNVDNKPPISMQNIKKDAVVMDLIYNPKETLFLKEAKEKGC CCCEEEEEEEEEEEECCCCCCCCCCCCCCHHHCCCCEEEEEEEECCCHHEEEEHHHHCCC ATINGLGMLIYQGAKSFEIWTGVKPDINIMKNAIIDIL EEECCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA