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The map label for this gene is rfbH [H]

Identifier: 150400820

GI number: 150400820

Start: 401152

End: 402450

Strand: Direct

Name: rfbH [H]

Synonym: Maeo_0388

Alternate gene names: 150400820

Gene position: 401152-402450 (Clockwise)

Preceding gene: 150400819

Following gene: 150400821

Centisome position: 25.56

GC content: 31.25

Gene sequence:

>1299_bases
ATGTCTGATGAAATTAAAAATAAAATTTTAGAATTGGTAAAGGAATATTACGTTAAATCCTATGAAAAATTACCTGATAA
TAAAGTCCCAGTCTCCGGGAAAGTTTATGATGAAAAAGAGTTGCAAAATTTAGTTGAAGCTTCATTAGAAGGTTGGTGGA
CAGAAGGTAAGTGGAACTCATTATTTGAAGAAAAATTAAAAAATTTCTTAAATATAGATTATGCTCTAACAGTAAATTCA
GGCTCATCTGCAAATCTTATTGCACTTAAAACATTAACATCTATAAAATTAGGGGATAAGCAAATTAAACCTGGCGATGA
AATAATTACAGTAGCAGCCGGATTCCCAACAACTGTTAATCCAATTATCGAAATTGGTGCAACTCCTGTTTTTGTAGATG
TTGAGTTAGGGACTTATGATGCAAAAGTAGAGGAAATAAAAGAGGCAGTATCTTCAAAAACAAAGGCCATATTTATGGCA
CATACTTTAGGGAATCCATTTAATATTAAGGCAATTAAAGAAATTTGTGAAGACCATAATTTATGGCTTATTGAAGATAA
CTGCGATGCTCTCGGTTCAAAATATGATGGAAAATATACTGGAACATTTGGGGATTTAGCAACATTGAGTTTTTACCCTG
CACACCATATCACAACAGCAGAAGGGGGGGCAGTTTTGACAAACGACCCACAACTGTATCAAATATCCCGTTCAATAAGA
GATTGGGGAAGGGATTGTTGGTGTCCAACAGGAAAGGATAATACTTGTGGAAGAAGATTTAATTGGCAGTTAGGAAAATT
ACCTTATGGTTATGACCATAAATATATTTATTCCGAAATAGGATATAATTTAAAAATGACTGATTTGCAGGCATCAATTG
GTGTGGCACAGATGGATAAATTAGAATCATTCACTAAAAAAAGAAAAGAAAATTTTGAATATTTATATAACAAATTAAAA
GAATTTGAAGATTATTTCATTCTTCCTAAGGCAACTGAAAATTCAGAACCATCATGGTTTGGATTTTTACTAACTATAAA
AGAAGGTAGTAATATAAATAGAACCAAATTTATGCAGTATCTGAATGATAATGGTATTGGAACAAGATTGTTATTTGGTG
GAAATTTAACAAAACAGCCGTATTTTATCGATTATCGTGTTAAATATAGACAAATTGGAGATTTAAAAAATACTGATATT
GTAATGAACAACACATTTTGGATTGGTGTTTATCCTGCACTGGAAAAGGGACATTTGGATTATGTTTATGATGTGTTTAA
GAAATATTTAGAAAGGTGA

Upstream 100 bases:

>100_bases
TTGAATTGGACTTTTGAATGGTATAGGAAATATTACGATAATGAAGACATATCATCATTTACAAATAATCAAATAAATTC
GTTTTTTGATAGGTGGAAAA

Downstream 100 bases:

>100_bases
AAAAAATGAAAATTCTTATAACGGGAGGATTAGGATTTTTGGGGAGCAATCTTTCACATGAAAGTATAAACCGCGGATAT
GAGACAATAATAATGGATAA

Product: DegT/DnrJ/EryC1/StrS aminotransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 431

Protein sequence:

>432_residues
MSDEIKNKILELVKEYYVKSYEKLPDNKVPVSGKVYDEKELQNLVEASLEGWWTEGKWNSLFEEKLKNFLNIDYALTVNS
GSSANLIALKTLTSIKLGDKQIKPGDEIITVAAGFPTTVNPIIEIGATPVFVDVELGTYDAKVEEIKEAVSSKTKAIFMA
HTLGNPFNIKAIKEICEDHNLWLIEDNCDALGSKYDGKYTGTFGDLATLSFYPAHHITTAEGGAVLTNDPQLYQISRSIR
DWGRDCWCPTGKDNTCGRRFNWQLGKLPYGYDHKYIYSEIGYNLKMTDLQASIGVAQMDKLESFTKKRKENFEYLYNKLK
EFEDYFILPKATENSEPSWFGFLLTIKEGSNINRTKFMQYLNDNGIGTRLLFGGNLTKQPYFIDYRVKYRQIGDLKNTDI
VMNNTFWIGVYPALEKGHLDYVYDVFKKYLER

Sequences:

>Translated_432_residues
MSDEIKNKILELVKEYYVKSYEKLPDNKVPVSGKVYDEKELQNLVEASLEGWWTEGKWNSLFEEKLKNFLNIDYALTVNS
GSSANLIALKTLTSIKLGDKQIKPGDEIITVAAGFPTTVNPIIEIGATPVFVDVELGTYDAKVEEIKEAVSSKTKAIFMA
HTLGNPFNIKAIKEICEDHNLWLIEDNCDALGSKYDGKYTGTFGDLATLSFYPAHHITTAEGGAVLTNDPQLYQISRSIR
DWGRDCWCPTGKDNTCGRRFNWQLGKLPYGYDHKYIYSEIGYNLKMTDLQASIGVAQMDKLESFTKKRKENFEYLYNKLK
EFEDYFILPKATENSEPSWFGFLLTIKEGSNINRTKFMQYLNDNGIGTRLLFGGNLTKQPYFIDYRVKYRQIGDLKNTDI
VMNNTFWIGVYPALEKGHLDYVYDVFKKYLER
>Mature_431_residues
SDEIKNKILELVKEYYVKSYEKLPDNKVPVSGKVYDEKELQNLVEASLEGWWTEGKWNSLFEEKLKNFLNIDYALTVNSG
SSANLIALKTLTSIKLGDKQIKPGDEIITVAAGFPTTVNPIIEIGATPVFVDVELGTYDAKVEEIKEAVSSKTKAIFMAH
TLGNPFNIKAIKEICEDHNLWLIEDNCDALGSKYDGKYTGTFGDLATLSFYPAHHITTAEGGAVLTNDPQLYQISRSIRD
WGRDCWCPTGKDNTCGRRFNWQLGKLPYGYDHKYIYSEIGYNLKMTDLQASIGVAQMDKLESFTKKRKENFEYLYNKLKE
FEDYFILPKATENSEPSWFGFLLTIKEGSNINRTKFMQYLNDNGIGTRLLFGGNLTKQPYFIDYRVKYRQIGDLKNTDIV
MNNTFWIGVYPALEKGHLDYVYDVFKKYLER

Specific function: Unknown

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=406, Percent_Identity=28.8177339901478, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI2367285, Length=242, Percent_Identity=28.9256198347107, Blast_Score=99, Evalue=5e-22,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 49487; Mature: 49356

Theoretical pI: Translated: 5.79; Mature: 5.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDEIKNKILELVKEYYVKSYEKLPDNKVPVSGKVYDEKELQNLVEASLEGWWTEGKWNS
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LFEEKLKNFLNIDYALTVNSGSSANLIALKTLTSIKLGDKQIKPGDEIITVAAGFPTTVN
HHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEHEEECCCCCCCCCCCEEEEECCCCCCCC
PIIEIGATPVFVDVELGTYDAKVEEIKEAVSSKTKAIFMAHTLGNPFNIKAIKEICEDHN
HHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCC
LWLIEDNCDALGSKYDGKYTGTFGDLATLSFYPAHHITTAEGGAVLTNDPQLYQISRSIR
EEEEECCHHHCCCCCCCEECCCCCCHHEEEEECCCCEEECCCCEEEECCCHHHHHHHHHH
DWGRDCWCPTGKDNTCGRRFNWQLGKLPYGYDHKYIYSEIGYNLKMTDLQASIGVAQMDK
HCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEHHHHCCCEEEECHHHHCCHHHHHH
LESFTKKRKENFEYLYNKLKEFEDYFILPKATENSEPSWFGFLLTIKEGSNINRTKFMQY
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHH
LNDNGIGTRLLFGGNLTKQPYFIDYRVKYRQIGDLKNTDIVMNNTFWIGVYPALEKGHLD
HCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEECEEEEEEECCCCCCCHH
YVYDVFKKYLER
HHHHHHHHHHCC
>Mature Secondary Structure 
SDEIKNKILELVKEYYVKSYEKLPDNKVPVSGKVYDEKELQNLVEASLEGWWTEGKWNS
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHH
LFEEKLKNFLNIDYALTVNSGSSANLIALKTLTSIKLGDKQIKPGDEIITVAAGFPTTVN
HHHHHHHHHHCCEEEEEECCCCCCCEEEEEEEHEEECCCCCCCCCCCEEEEECCCCCCCC
PIIEIGATPVFVDVELGTYDAKVEEIKEAVSSKTKAIFMAHTLGNPFNIKAIKEICEDHN
HHHHCCCCEEEEEEEECCCCHHHHHHHHHHHCCCEEEEEEEECCCCCCHHHHHHHHCCCC
LWLIEDNCDALGSKYDGKYTGTFGDLATLSFYPAHHITTAEGGAVLTNDPQLYQISRSIR
EEEEECCHHHCCCCCCCEECCCCCCHHEEEEECCCCEEECCCCEEEECCCHHHHHHHHHH
DWGRDCWCPTGKDNTCGRRFNWQLGKLPYGYDHKYIYSEIGYNLKMTDLQASIGVAQMDK
HCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCEEHHHHCCCEEEECHHHHCCHHHHHH
LESFTKKRKENFEYLYNKLKEFEDYFILPKATENSEPSWFGFLLTIKEGSNINRTKFMQY
HHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCCCCCCEEEEEEEEECCCCCCHHHHHHH
LNDNGIGTRLLFGGNLTKQPYFIDYRVKYRQIGDLKNTDIVMNNTFWIGVYPALEKGHLD
HCCCCCCEEEEECCCCCCCCEEEEEEEEEEECCCCCCCCEEEECEEEEEEECCCCCCCHH
YVYDVFKKYLER
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1710759; 11677609 [H]