| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400754
Identifier: 150400754
GI number: 150400754
Start: 345251
End: 345805
Strand: Reverse
Name: 150400754
Synonym: Maeo_0320
Alternate gene names: NA
Gene position: 345805-345251 (Counterclockwise)
Preceding gene: 150400755
Following gene: 150400753
Centisome position: 22.03
GC content: 30.99
Gene sequence:
>555_bases ATGGTTAAAATTGCATGGGGCATTACCGGATGTGGAGATAAGATAGAGGAAATAGTCCATATGATGATTGATTTAAAAAA TAAATATAATTTAGATATTGATGTATATGCCTCAAAAAGTGCAAAGGCTGTTTTAAAGTGGTATAAACTTTGGAATTTGA TAATGGATGAATTCTATGACATTAGATTAGAAGTAGATGCAAATGCCCCATTTTTACCGGGAAAATTGCAAACTGGAAAA TATGATATTTTTATCGTAGCTCCAACCACTGCAAACACTGTTGCAAAGGTATCTCATTGCATAGCCGATACTCTTATTAC AAATTCCATTGCCCAAGGTATTAAAGCAAAGGTTCCTACATATATTTACCCACCAGATAATAAAATGGGAGAAATTGAAA CAATAATTCCCAGTGGAAAAACTTTGAAGTTATATATTAGAAAAGAAGATGTAGAGAATGTTGATAAATTAAGAAAAATG GACGGCATTACAATTTTAGATGGCGTAGATGATATAAGAGAAATAATTTTAAAATATGTCGATACTAACGATTAA
Upstream 100 bases:
>100_bases ATACATTGTCCAAAAATAGGGTTTAAGTAGGTTATGCATATATATAACATATATATAGTAAAATATATACGCACAGATAT ATTGTAATAAAGGTGAAATC
Downstream 100 bases:
>100_bases AATATATAATTATGTTAATAATTTTTTGTAATATTAAATCATAAATCAACATCTATTTATAAATAAAGATTGTAATCAAT AATATTGTATTTTATAATAA
Product: archaeoflavoprotein AfpA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 184; Mature: 184
Protein sequence:
>184_residues MVKIAWGITGCGDKIEEIVHMMIDLKNKYNLDIDVYASKSAKAVLKWYKLWNLIMDEFYDIRLEVDANAPFLPGKLQTGK YDIFIVAPTTANTVAKVSHCIADTLITNSIAQGIKAKVPTYIYPPDNKMGEIETIIPSGKTLKLYIRKEDVENVDKLRKM DGITILDGVDDIREIILKYVDTND
Sequences:
>Translated_184_residues MVKIAWGITGCGDKIEEIVHMMIDLKNKYNLDIDVYASKSAKAVLKWYKLWNLIMDEFYDIRLEVDANAPFLPGKLQTGK YDIFIVAPTTANTVAKVSHCIADTLITNSIAQGIKAKVPTYIYPPDNKMGEIETIIPSGKTLKLYIRKEDVENVDKLRKM DGITILDGVDDIREIILKYVDTND >Mature_184_residues MVKIAWGITGCGDKIEEIVHMMIDLKNKYNLDIDVYASKSAKAVLKWYKLWNLIMDEFYDIRLEVDANAPFLPGKLQTGK YDIFIVAPTTANTVAKVSHCIADTLITNSIAQGIKAKVPTYIYPPDNKMGEIETIIPSGKTLKLYIRKEDVENVDKLRKM DGITILDGVDDIREIILKYVDTND
Specific function: Unknown
COG id: COG1036
COG function: function code C; Archaeal flavoproteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.jannaschii MJ0208 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014072 - InterPro: IPR003382 [H]
Pfam domain/function: PF02441 Flavoprotein [H]
EC number: NA
Molecular weight: Translated: 20800; Mature: 20800
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKIAWGITGCGDKIEEIVHMMIDLKNKYNLDIDVYASKSAKAVLKWYKLWNLIMDEFYD CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEE IRLEVDANAPFLPGKLQTGKYDIFIVAPTTANTVAKVSHCIADTLITNSIAQGIKAKVPT EEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE YIYPPDNKMGEIETIIPSGKTLKLYIRKEDVENVDKLRKMDGITILDGVDDIREIILKYV EEECCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHH DTND CCCC >Mature Secondary Structure MVKIAWGITGCGDKIEEIVHMMIDLKNKYNLDIDVYASKSAKAVLKWYKLWNLIMDEFYD CEEEEEECCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHEE IRLEVDANAPFLPGKLQTGKYDIFIVAPTTANTVAKVSHCIADTLITNSIAQGIKAKVPT EEEEECCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCE YIYPPDNKMGEIETIIPSGKTLKLYIRKEDVENVDKLRKMDGITILDGVDDIREIILKYV EEECCCCCCCCEEEECCCCCEEEEEEECCCHHHHHHHHHHCCCEEECCHHHHHHHHHHHH DTND CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]