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The map label for this gene is yurY [H]

Identifier: 150400753

GI number: 150400753

Start: 344137

End: 344877

Strand: Reverse

Name: yurY [H]

Synonym: Maeo_0319

Alternate gene names: 150400753

Gene position: 344877-344137 (Counterclockwise)

Preceding gene: 150400754

Following gene: 150400752

Centisome position: 21.97

GC content: 30.63

Gene sequence:

>741_bases
ATGCTTAGAATTGAAAATTTATGTGTAAAAATAGGAGATAAAGAAATATTGACCGATATTAATTTACACATCGAAAAAGG
AGAAACTCATGTATTATTTGGTCCAAATGGAGCAGGTAAATCTACATTGATAAATACAATACTTGGAAATCCAAAATATG
AGGTTGCAAATGGTAGCATCTATTTTAATGGAAAAGATATTACGGACATGCCGATGCATGAAAGGGCAAAACTTGGAATA
GGTATATCCTACCAAAGCCCACCTGCAATTTCAGGAGTAAAGTTAAAAAATCTTTTAAAAATTATATCAAAAAGAGATTG
GGAAGATGTTGAAAAAATGGTAAAACATTTGAACTTTGAAAAGTTCATGGATAGGGAGGTAAATGTAGGATTCTCCGGAG
GAGAGGTAAAAAGGTCTGAAATACTTCAAATATATTCCCAAAATCCAGATTTTATCATGTTTGATGAACCAGATAGTGGA
GTAGATGTTGAGAATGTAGAATTAATTGGAAATACAATTAATAAATTGCTCGATAAAGAACTGAAAATTTGTGAAAGAAA
TAAAAGTGGTTTAATCATCACACACATGGGACATATTTTAGATTTTATGGAAGTTGATAAAGCTCATGTTTTATGTGATG
GAGTAATTTCATGTTCTGGAAATCCAAGAGAAATTCTTAATAATCTAATAAACCACGGATATAAGAGGTGCATAGCATGC
TATCAAAAGAAAAAACATTAA

Upstream 100 bases:

>100_bases
GAGCTCCGCAGAATAAAATTTAATGGAGTATCACAAATATTTATGACCTGCGAGGATAAACTTCCGAATACATCTTATTT
ATCAAAATGGTGATTAACAG

Downstream 100 bases:

>100_bases
AAATACTGGAACAGGCACAAAAATATAAAGATGTTCCGGCACCATTTGGAGAAGATATCAATCTTGAAGACTATAAAATA
GAAAAAGGAGGCATATCAAT

Product: ABC transporter related

Products: NA

Alternate protein names: VEG296 [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MLRIENLCVKIGDKEILTDINLHIEKGETHVLFGPNGAGKSTLINTILGNPKYEVANGSIYFNGKDITDMPMHERAKLGI
GISYQSPPAISGVKLKNLLKIISKRDWEDVEKMVKHLNFEKFMDREVNVGFSGGEVKRSEILQIYSQNPDFIMFDEPDSG
VDVENVELIGNTINKLLDKELKICERNKSGLIITHMGHILDFMEVDKAHVLCDGVISCSGNPREILNNLINHGYKRCIAC
YQKKKH

Sequences:

>Translated_246_residues
MLRIENLCVKIGDKEILTDINLHIEKGETHVLFGPNGAGKSTLINTILGNPKYEVANGSIYFNGKDITDMPMHERAKLGI
GISYQSPPAISGVKLKNLLKIISKRDWEDVEKMVKHLNFEKFMDREVNVGFSGGEVKRSEILQIYSQNPDFIMFDEPDSG
VDVENVELIGNTINKLLDKELKICERNKSGLIITHMGHILDFMEVDKAHVLCDGVISCSGNPREILNNLINHGYKRCIAC
YQKKKH
>Mature_246_residues
MLRIENLCVKIGDKEILTDINLHIEKGETHVLFGPNGAGKSTLINTILGNPKYEVANGSIYFNGKDITDMPMHERAKLGI
GISYQSPPAISGVKLKNLLKIISKRDWEDVEKMVKHLNFEKFMDREVNVGFSGGEVKRSEILQIYSQNPDFIMFDEPDSG
VDVENVELIGNTINKLLDKELKICERNKSGLIITHMGHILDFMEVDKAHVLCDGVISCSGNPREILNNLINHGYKRCIAC
YQKKKH

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI11967969, Length=243, Percent_Identity=25.1028806584362, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI9961250, Length=225, Percent_Identity=24.8888888888889, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI4505771, Length=225, Percent_Identity=24.8888888888889, Blast_Score=64, Evalue=9e-11,
Organism=Homo sapiens, GI9961252, Length=225, Percent_Identity=24.8888888888889, Blast_Score=64, Evalue=9e-11,
Organism=Escherichia coli, GI1787972, Length=249, Percent_Identity=36.144578313253, Blast_Score=150, Evalue=6e-38,
Organism=Escherichia coli, GI1789593, Length=235, Percent_Identity=28.5106382978723, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI1786563, Length=249, Percent_Identity=28.5140562248996, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI87082268, Length=210, Percent_Identity=28.5714285714286, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1788165, Length=225, Percent_Identity=28, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081709, Length=230, Percent_Identity=26.5217391304348, Blast_Score=71, Evalue=5e-14,
Organism=Escherichia coli, GI1787089, Length=240, Percent_Identity=25.8333333333333, Blast_Score=70, Evalue=9e-14,
Organism=Escherichia coli, GI1790467, Length=235, Percent_Identity=28.5106382978723, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=27.0386266094421, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790739, Length=251, Percent_Identity=24.7011952191235, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1787029, Length=240, Percent_Identity=26.25, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1789672, Length=225, Percent_Identity=28.4444444444444, Blast_Score=64, Evalue=6e-12,
Organism=Escherichia coli, GI1786703, Length=171, Percent_Identity=29.2397660818713, Blast_Score=63, Evalue=1e-11,
Organism=Escherichia coli, GI1788210, Length=210, Percent_Identity=26.6666666666667, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790525, Length=233, Percent_Identity=27.4678111587983, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI48995001, Length=227, Percent_Identity=25.1101321585903, Blast_Score=62, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=233, Percent_Identity=26.6094420600858, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17543740, Length=223, Percent_Identity=26.9058295964126, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17533971, Length=226, Percent_Identity=26.1061946902655, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17569081, Length=223, Percent_Identity=27.8026905829596, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71992285, Length=221, Percent_Identity=27.6018099547511, Blast_Score=69, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17541710, Length=226, Percent_Identity=25.6637168141593, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI71984940, Length=212, Percent_Identity=28.3018867924528, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI71996809, Length=226, Percent_Identity=24.3362831858407, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=193, Percent_Identity=25.9067357512953, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI115535101, Length=225, Percent_Identity=24.4444444444444, Blast_Score=66, Evalue=2e-11,
Organism=Caenorhabditis elegans, GI193202349, Length=225, Percent_Identity=24, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI71992290, Length=226, Percent_Identity=27.8761061946903, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17569145, Length=170, Percent_Identity=27.0588235294118, Blast_Score=64, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=224, Percent_Identity=24.1071428571429, Blast_Score=64, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI193211017, Length=226, Percent_Identity=23.8938053097345, Blast_Score=64, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI193211015, Length=226, Percent_Identity=23.8938053097345, Blast_Score=64, Evalue=1e-10,
Organism=Saccharomyces cerevisiae, GI6323217, Length=178, Percent_Identity=26.9662921348315, Blast_Score=67, Evalue=3e-12,
Organism=Saccharomyces cerevisiae, GI6324498, Length=241, Percent_Identity=24.896265560166, Blast_Score=63, Evalue=4e-11,
Organism=Drosophila melanogaster, GI24643674, Length=229, Percent_Identity=24.8908296943231, Blast_Score=65, Evalue=5e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 27723; Mature: 27723

Theoretical pI: Translated: 6.99; Mature: 6.99

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
5.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRIENLCVKIGDKEILTDINLHIEKGETHVLFGPNGAGKSTLINTILGNPKYEVANGSI
CCCCCCCCEEECCHHEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCEE
YFNGKDITDMPMHERAKLGIGISYQSPPAISGVKLKNLLKIISKRDWEDVEKMVKHLNFE
EECCCCCCCCCCCHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHH
KFMDREVNVGFSGGEVKRSEILQIYSQNPDFIMFDEPDSGVDVENVELIGNTINKLLDKE
HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LKICERNKSGLIITHMGHILDFMEVDKAHVLCDGVISCSGNPREILNNLINHGYKRCIAC
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHEEECCEEECCCCHHHHHHHHHHHHHHHHHHH
YQKKKH
HHHCCC
>Mature Secondary Structure
MLRIENLCVKIGDKEILTDINLHIEKGETHVLFGPNGAGKSTLINTILGNPKYEVANGSI
CCCCCCCCEEECCHHEEEEEEEEEECCCEEEEECCCCCCHHHHHHHHHCCCCEEEECCEE
YFNGKDITDMPMHERAKLGIGISYQSPPAISGVKLKNLLKIISKRDWEDVEKMVKHLNFE
EECCCCCCCCCCCHHHHCCEEEECCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCHH
KFMDREVNVGFSGGEVKRSEILQIYSQNPDFIMFDEPDSGVDVENVELIGNTINKLLDKE
HHHCCCCCCCCCCCCCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHH
LKICERNKSGLIITHMGHILDFMEVDKAHVLCDGVISCSGNPREILNNLINHGYKRCIAC
HHHHHCCCCCEEEEEHHHHHHHHHHHHHHEEECCEEECCCCHHHHHHHHHHHHHHHHHHH
YQKKKH
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377; 9298659 [H]