Click here to switch to the map view.

The map label for this gene is rpoE2 [H]

Identifier: 150400716

GI number: 150400716

Start: 306601

End: 306780

Strand: Direct

Name: rpoE2 [H]

Synonym: Maeo_0281

Alternate gene names: 150400716

Gene position: 306601-306780 (Clockwise)

Preceding gene: 150400715

Following gene: 150400717

Centisome position: 19.53

GC content: 28.89

Gene sequence:

>180_bases
ATGAAAAAATCTTGTATAAGATGCAAGTATTTAACAGATGATGAAAAATGCCCAATTTGTGGCTTTGAAACATCAGATAA
TTGGAGGGGGCTTTTAATTATATTGGACCCAAAAGAATCTGAAATAGCTAAAAAAGCAAGAATTGATATCAAAGGTAAAT
ATTCATTAAGTGTAAAGTAA

Upstream 100 bases:

>100_bases
GAAGAATAATCTACTACTCATAATGAATATATACATTCATTTATTTATTTTATAATTAATGATATAATAAATCAATAATT
GCTATAATTAAGGTGGAATT

Downstream 100 bases:

>100_bases
TAAATAATAAGAATAATAAGGTAATAAAGACATATAAGAATAATAAGGTAAATAATGTATATGCTAAATGAATCGACAAA
AGAGATTTTAAAAAAACCCT

Product: DNA-directed RNA polymerase subunit E, RpoE2

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 59; Mature: 59

Protein sequence:

>59_residues
MKKSCIRCKYLTDDEKCPICGFETSDNWRGLLIILDPKESEIAKKARIDIKGKYSLSVK

Sequences:

>Translated_59_residues
MKKSCIRCKYLTDDEKCPICGFETSDNWRGLLIILDPKESEIAKKARIDIKGKYSLSVK
>Mature_59_residues
MKKSCIRCKYLTDDEKCPICGFETSDNWRGLLIILDPKESEIAKKARIDIKGKYSLSVK

Specific function: DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates [H]

COG id: COG2093

COG function: function code K; DNA-directed RNA polymerase, subunit E''

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007178
- InterPro:   IPR022800
- ProDom:   PD019197 [H]

Pfam domain/function: PF06093 Spt4 [H]

EC number: =2.7.7.6 [H]

Molecular weight: Translated: 6780; Mature: 6780

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

6.8 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
8.5 %Cys+Met (Translated Protein)
6.8 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
8.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSCIRCKYLTDDEKCPICGFETSDNWRGLLIILDPKESEIAKKARIDIKGKYSLSVK
CCCCCEEEEECCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEC
>Mature Secondary Structure
MKKSCIRCKYLTDDEKCPICGFETSDNWRGLLIILDPKESEIAKKARIDIKGKYSLSVK
CCCCCEEEEECCCCCCCCEECCCCCCCCCEEEEEECCCCCCCCEEEEEECCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]