Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150400641

Identifier: 150400641

GI number: 150400641

Start: 216974

End: 217270

Strand: Direct

Name: 150400641

Synonym: Maeo_0203

Alternate gene names: NA

Gene position: 216974-217270 (Clockwise)

Preceding gene: 150400640

Following gene: 150400642

Centisome position: 13.82

GC content: 30.98

Gene sequence:

>297_bases
GTGATAGCCCCTACTAAACCAGAAGCTAAGGTATCTTTTAAAAAATTATATGGAAAATCCGTTGTAGGAGATATGGGTAG
TATAATAGGAAATATAATTGATGTAGTGTTTGATGAGAATACTGGAAAATTATCTCATTTTGATATAGAGCCATCTGAAC
AAAGCCCTATCCCCCCATCAAATGACTGTTATAAATTAATACCATATAGGATAGTTTTAGCGGTTCGAGATGTTGTAGTT
ATAGATGAGTCAAAAATAACCAATGTTAAAATAGTAAGTAAAAAACCAATACAATAA

Upstream 100 bases:

>100_bases
ATAAATATAAATACTTTGAAAGATAAAGAAATTGTTGAAAACATATTTGGTGGAGAATATAAAAAATTAAATAAAAAATA
ACACATATTGGTGATTTATT

Downstream 100 bases:

>100_bases
TCTTTAAATATGATATGATTATTTTCTAATTTTTCATATTTATTTTTAACAAAATCCTTTTGATTTTGTTTAATAGTTAT
GATAATCAATATTTATTATT

Product: PRC-barrel domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 98; Mature: 98

Protein sequence:

>98_residues
MIAPTKPEAKVSFKKLYGKSVVGDMGSIIGNIIDVVFDENTGKLSHFDIEPSEQSPIPPSNDCYKLIPYRIVLAVRDVVV
IDESKITNVKIVSKKPIQ

Sequences:

>Translated_98_residues
MIAPTKPEAKVSFKKLYGKSVVGDMGSIIGNIIDVVFDENTGKLSHFDIEPSEQSPIPPSNDCYKLIPYRIVLAVRDVVV
IDESKITNVKIVSKKPIQ
>Mature_98_residues
MIAPTKPEAKVSFKKLYGKSVVGDMGSIIGNIIDVVFDENTGKLSHFDIEPSEQSPIPPSNDCYKLIPYRIVLAVRDVVV
IDESKITNVKIVSKKPIQ

Specific function: Unknown

COG id: COG1873

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007903
- InterPro:   IPR011033 [H]

Pfam domain/function: PF05239 PRC [H]

EC number: NA

Molecular weight: Translated: 10814; Mature: 10814

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAPTKPEAKVSFKKLYGKSVVGDMGSIIGNIIDVVFDENTGKLSHFDIEPSEQSPIPPS
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCC
NDCYKLIPYRIVLAVRDVVVIDESKITNVKIVSKKPIQ
CCCCHHHHHHHHEEHHCEEEECCCCCCEEEEECCCCCC
>Mature Secondary Structure
MIAPTKPEAKVSFKKLYGKSVVGDMGSIIGNIIDVVFDENTGKLSHFDIEPSEQSPIPPS
CCCCCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHEECCCCCCEEEEECCCCCCCCCCCC
NDCYKLIPYRIVLAVRDVVVIDESKITNVKIVSKKPIQ
CCCCHHHHHHHHEEHHCEEEECCCCCCEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]