| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400566
Identifier: 150400566
GI number: 150400566
Start: 143233
End: 144237
Strand: Direct
Name: 150400566
Synonym: Maeo_0128
Alternate gene names: NA
Gene position: 143233-144237 (Clockwise)
Preceding gene: 150400565
Following gene: 150400567
Centisome position: 9.13
GC content: 28.16
Gene sequence:
>1005_bases ATGAATAGATTAAATAAATCTATCTGCATTATTGGAGTTGTTGCTTTAATATTTGGTATATGTTTTGCAGGTTGCATTGG AGAGCAACAGATGTCAGCAGACCAAATATCTCAAAAAATGCAAGAAAAATACGATTCCATAAATGATATGAGTTGTAATA TGGTTATGACGGTAGATGTAAATGGAAAACCTGAAAAAATAGAATACACATACAAATATAAAAAACCAAATAAATCATTC ATAGAAAATGATGAATTCCTAATGGCATCAGATGGAAAAACCTTTTATATGTATGATAAAAATAAAAATGAATATATGAC TATGGACGCCCCAAAACAGCAAAATAATAATTATGGAGAAATGATTAAAAGCATTCTTGAAATGTATAATCCAGAATATG TAGGGGAAGAAAAGATTTCGAATGGGGATTGTTATATATTAAAATTAACTACCAAAAATAAAACCGGCACAATAGCCTCA TCAACAGGAAATATGAAAATATGGGTTGATAAAGAATATTGGCAACCAATCAAAATAGAATTTAATGGTGGAACAATAGA ATATCAAAATGTAAAATATAATACTGGACTTGATGACAGTATATTTACGATTACGCCACCAAAAGGAGCAAAATTAATGA ATAACAATATACCAAAAAAAATGACAATTGAGGAAGCTCAAAAGCAGGTATCATTTACAATATTGATTCCAAAATATACC GGAGACTATGAATTTAATAATGCTATGGTGGCAGGGAATGGAAATAATCAAATAATATCTATTACATATACAAAAGGAAT TAATGGATTTGTAATAATGGAAGATAACTCAAAACCAATAGATCTTCCAAACTCTGAAAAAGTTATGATTGGAGATATTG AAGCCCAATATATTAAAAATATGGGGGCAAATATGCTTACATTTAATAAAGATGGCGTAAATATAGTAATATCTGGAACT TTGGATAAAGAAGAATTAATAAAAATAGCTAAATCAATGATTTAA
Upstream 100 bases:
>100_bases ATATATTTAAATAATTTAAATAAAATTAATATTAATTAATAATTGTTAATTAATATTTTATTTTTTAGAAAAATAATCTA CTAAATAAAGCGGTGAAAAT
Downstream 100 bases:
>100_bases CTAAATATATTCTTTTTTTAATTTTTTTTAAATTCAATTTACAATTTTTTAATAATGGAGCTCCCAAATAATTATTTTTT ATCCCATATTTTTTCGAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 334; Mature: 334
Protein sequence:
>334_residues MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDVNGKPEKIEYTYKYKKPNKSF IENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGEMIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIAS STGNMKIWVDKEYWQPIKIEFNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKNMGANMLTFNKDGVNIVISGT LDKEELIKIAKSMI
Sequences:
>Translated_334_residues MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDVNGKPEKIEYTYKYKKPNKSF IENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGEMIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIAS STGNMKIWVDKEYWQPIKIEFNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKNMGANMLTFNKDGVNIVISGT LDKEELIKIAKSMI >Mature_334_residues MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDVNGKPEKIEYTYKYKKPNKSF IENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGEMIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIAS STGNMKIWVDKEYWQPIKIEFNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKNMGANMLTFNKDGVNIVISGT LDKEELIKIAKSMI
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004564 [H]
Pfam domain/function: PF03548 LolA [H]
EC number: NA
Molecular weight: Translated: 37798; Mature: 37798
Theoretical pI: Translated: 4.99; Mature: 4.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 6.3 %Met (Translated Protein) 7.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 6.3 %Met (Mature Protein) 7.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDV CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEC NGKPEKIEYTYKYKKPNKSFIENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGE CCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHH MIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIASSTGNMKIWVDKEYWQPIKIE HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEHHHCCEEEEE FNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT ECCCEEEEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEEEHHHHHCEEEEEEEEECCC GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKN CCEEECCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHH MGANMLTFNKDGVNIVISGTLDKEELIKIAKSMI CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCC >Mature Secondary Structure MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDV CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEC NGKPEKIEYTYKYKKPNKSFIENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGE CCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHH MIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIASSTGNMKIWVDKEYWQPIKIE HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEHHHCCEEEEE FNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT ECCCEEEEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEEEHHHHHCEEEEEEEEECCC GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKN CCEEECCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHH MGANMLTFNKDGVNIVISGTLDKEELIKIAKSMI CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]