Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

Click here to switch to the map view.

The map label for this gene is 150400566

Identifier: 150400566

GI number: 150400566

Start: 143233

End: 144237

Strand: Direct

Name: 150400566

Synonym: Maeo_0128

Alternate gene names: NA

Gene position: 143233-144237 (Clockwise)

Preceding gene: 150400565

Following gene: 150400567

Centisome position: 9.13

GC content: 28.16

Gene sequence:

>1005_bases
ATGAATAGATTAAATAAATCTATCTGCATTATTGGAGTTGTTGCTTTAATATTTGGTATATGTTTTGCAGGTTGCATTGG
AGAGCAACAGATGTCAGCAGACCAAATATCTCAAAAAATGCAAGAAAAATACGATTCCATAAATGATATGAGTTGTAATA
TGGTTATGACGGTAGATGTAAATGGAAAACCTGAAAAAATAGAATACACATACAAATATAAAAAACCAAATAAATCATTC
ATAGAAAATGATGAATTCCTAATGGCATCAGATGGAAAAACCTTTTATATGTATGATAAAAATAAAAATGAATATATGAC
TATGGACGCCCCAAAACAGCAAAATAATAATTATGGAGAAATGATTAAAAGCATTCTTGAAATGTATAATCCAGAATATG
TAGGGGAAGAAAAGATTTCGAATGGGGATTGTTATATATTAAAATTAACTACCAAAAATAAAACCGGCACAATAGCCTCA
TCAACAGGAAATATGAAAATATGGGTTGATAAAGAATATTGGCAACCAATCAAAATAGAATTTAATGGTGGAACAATAGA
ATATCAAAATGTAAAATATAATACTGGACTTGATGACAGTATATTTACGATTACGCCACCAAAAGGAGCAAAATTAATGA
ATAACAATATACCAAAAAAAATGACAATTGAGGAAGCTCAAAAGCAGGTATCATTTACAATATTGATTCCAAAATATACC
GGAGACTATGAATTTAATAATGCTATGGTGGCAGGGAATGGAAATAATCAAATAATATCTATTACATATACAAAAGGAAT
TAATGGATTTGTAATAATGGAAGATAACTCAAAACCAATAGATCTTCCAAACTCTGAAAAAGTTATGATTGGAGATATTG
AAGCCCAATATATTAAAAATATGGGGGCAAATATGCTTACATTTAATAAAGATGGCGTAAATATAGTAATATCTGGAACT
TTGGATAAAGAAGAATTAATAAAAATAGCTAAATCAATGATTTAA

Upstream 100 bases:

>100_bases
ATATATTTAAATAATTTAAATAAAATTAATATTAATTAATAATTGTTAATTAATATTTTATTTTTTAGAAAAATAATCTA
CTAAATAAAGCGGTGAAAAT

Downstream 100 bases:

>100_bases
CTAAATATATTCTTTTTTTAATTTTTTTTAAATTCAATTTACAATTTTTTAATAATGGAGCTCCCAAATAATTATTTTTT
ATCCCATATTTTTTCGAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 334; Mature: 334

Protein sequence:

>334_residues
MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDVNGKPEKIEYTYKYKKPNKSF
IENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGEMIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIAS
STGNMKIWVDKEYWQPIKIEFNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT
GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKNMGANMLTFNKDGVNIVISGT
LDKEELIKIAKSMI

Sequences:

>Translated_334_residues
MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDVNGKPEKIEYTYKYKKPNKSF
IENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGEMIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIAS
STGNMKIWVDKEYWQPIKIEFNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT
GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKNMGANMLTFNKDGVNIVISGT
LDKEELIKIAKSMI
>Mature_334_residues
MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDVNGKPEKIEYTYKYKKPNKSF
IENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGEMIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIAS
STGNMKIWVDKEYWQPIKIEFNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT
GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKNMGANMLTFNKDGVNIVISGT
LDKEELIKIAKSMI

Specific function: Unknown

COG id: COG2834

COG function: function code M; Outer membrane lipoprotein-sorting protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004564 [H]

Pfam domain/function: PF03548 LolA [H]

EC number: NA

Molecular weight: Translated: 37798; Mature: 37798

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
6.3 %Met     (Translated Protein)
7.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
6.3 %Met     (Mature Protein)
7.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEC
NGKPEKIEYTYKYKKPNKSFIENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGE
CCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHH
MIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIASSTGNMKIWVDKEYWQPIKIE
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEHHHCCEEEEE
FNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT
ECCCEEEEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEEEHHHHHCEEEEEEEEECCC
GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKN
CCEEECCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHH
MGANMLTFNKDGVNIVISGTLDKEELIKIAKSMI
CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCC
>Mature Secondary Structure
MNRLNKSICIIGVVALIFGICFAGCIGEQQMSADQISQKMQEKYDSINDMSCNMVMTVDV
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHHCCCCCCCCCEEEEEEC
NGKPEKIEYTYKYKKPNKSFIENDEFLMASDGKTFYMYDKNKNEYMTMDAPKQQNNNYGE
CCCCCEEEEEEEECCCCCCCCCCCCEEEECCCCEEEEEECCCCCEEEECCCCCCCCCHHH
MIKSILEMYNPEYVGEEKISNGDCYILKLTTKNKTGTIASSTGNMKIWVDKEYWQPIKIE
HHHHHHHHCCCCCCCCCCCCCCCEEEEEEEECCCCCEEEECCCCEEEEEEHHHCCEEEEE
FNGGTIEYQNVKYNTGLDDSIFTITPPKGAKLMNNNIPKKMTIEEAQKQVSFTILIPKYT
ECCCEEEEEEEEECCCCCCCEEEEECCCCCHHHCCCCCCEEEHHHHHCEEEEEEEEECCC
GDYEFNNAMVAGNGNNQIISITYTKGINGFVIMEDNSKPIDLPNSEKVMIGDIEAQYIKN
CCEEECCEEEEECCCCEEEEEEEECCCCEEEEEECCCCCCCCCCCCEEEEECCHHHHHHH
MGANMLTFNKDGVNIVISGTLDKEELIKIAKSMI
CCCCEEEEECCCCEEEEECCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]