Definition Methanococcus aeolicus Nankai-3, complete genome.
Accession NC_009635
Length 1,569,500

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The map label for this gene is fmdC [H]

Identifier: 150400522

GI number: 150400522

Start: 86655

End: 87932

Strand: Direct

Name: fmdC [H]

Synonym: Maeo_0084

Alternate gene names: 150400522

Gene position: 86655-87932 (Clockwise)

Preceding gene: 150400521

Following gene: 150400523

Centisome position: 5.52

GC content: 36.23

Gene sequence:

>1278_bases
ATGGATATAATATTAACTCCAACCAAAAAACCAGACATATCAATTGAGGCAGATGTTATTTCTCCCGATTATTTTGCAGG
TAAAACCATAGACGAAATTAAATCATTAGAGGTATGGCAAGGCCCTATTAAATTACCACTTTCAGATTTCTTTGATGTAA
AAATTGAAAATAATGAAAAAGATAAAGCAGATGGAAGGGGGGGAGCTCCCAAAGATATCAACGAAATTAATATAATAATT
AATGGAGATGTCGATAGAATAAAATATATAGGAACTGAAATGACCGGTGGAACCATTACAATTAATGGAAATACTGGAAT
AAGAATTGGTTCATCAATGAAGGGAGGAAGCATAACCATAAATGGAAATGCAGGCTCATGGACTGGAATGGAAATGAAAG
GAGGAAGCATAACCATAAATGGAAATGCAGGAGACTATATTGGCTGTGCATATAGGGGTAGCTGGGAAGGAATGACTGGC
GGAACAATAACCATAAATGGAAATGCAGGAAAAAATGTTGCAACTGGATTAAAAGGGGGAACCATTACAATTAATGGTGA
TGTTGATGAGTTTTGTGGAATAAGACAAAACGGGGGACTTATTGTAATAAATGGAAATGTCACAAGAACCGTAGGAGTTG
AAATGACAAAAGGAACATTGGTGGTTTGCGGAAATATTAGGGGTTTTGCCCCTGGTTTCGAGCAAATCGGAGTAGAAAAA
GATATAGTTTTAAAAGACGGCACAAAAATCAACGGTAAATTCCTTAAATTCAAAGGAGATATAGCAATTGTGCCAAAACC
AAAAGGAATTTTGTATGTTTCCGAAGAAAATAACATTGGGCTTGCAGACCCTTCAAAATATACGACCTTCAAAGAATACC
ACTACAAAGGAGGCATGGAAGCTCTTTTAAACACTGGAAGTACTGTGGAGCAAGGGGCCATTATTAAAGGCGGTGAAAAA
TACACAAAAGAATATGTTGAAGAATGTGCTGTCTGCCATATTCATCCAGAAGATTACAGAATACTTGGAGCTCCGACATA
TGTAAAAATAATAAGTAATGATAAAAAATCCGAAGTAGCTGTAAAGGCAGTTTCAGACGATGGATTGCATAAAGGAACTA
TATTTATGCCAAGGTCTATATGGGCTAACGCAATTACTGGTTCCCATACTGATTCGTGTGGTTCTCCCCTGTATAAAGGA
AATAGTGTATTTGTTGAACCGATTGAAAAAGGAAATATAATCGATGCAGAACAGATGATAAAAAGTATGTATTGGTGA

Upstream 100 bases:

>100_bases
GAATCTTGGTTTAAGAAATACTACTCACTTAGGCTAAAAAACTATCCTACAACGAATAAATATCTTACAAATCCAGAAGC
TGTAAATATAGGTGAATAAT

Downstream 100 bases:

>100_bases
GATAATGAAAAAAGTATATAGGGATATCAACTGTCCCGTATGTGGTATGGGATGTGATGATATCGTAGTAATCTACGATA
AAGAAAACAATACGATAGAG

Product: formylmethanofuran dehydrogenase

Products: NA

Alternate protein names: Molybdenum-containing formylmethanofuran dehydrogenase I subunit C [H]

Number of amino acids: Translated: 425; Mature: 425

Protein sequence:

>425_residues
MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEKDKADGRGGAPKDINEINIII
NGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITINGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTG
GTITINGNAGKNVATGLKGGTITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK
DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGMEALLNTGSTVEQGAIIKGGEK
YTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVAVKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKG
NSVFVEPIEKGNIIDAEQMIKSMYW

Sequences:

>Translated_425_residues
MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEKDKADGRGGAPKDINEINIII
NGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITINGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTG
GTITINGNAGKNVATGLKGGTITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK
DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGMEALLNTGSTVEQGAIIKGGEK
YTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVAVKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKG
NSVFVEPIEKGNIIDAEQMIKSMYW
>Mature_425_residues
MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEKDKADGRGGAPKDINEINIII
NGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITINGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTG
GTITINGNAGKNVATGLKGGTITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK
DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGMEALLNTGSTVEQGAIIKGGEK
YTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVAVKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKG
NSVFVEPIEKGNIIDAEQMIKSMYW

Specific function: Catalyzes the reversible oxidation of CO(2) and methanofuran (MFR) to N-formylmethanofuran (CHO-MFR). Can only oxidize formylmethanofuran. This enzyme is oxygen-labile [H]

COG id: COG2218

COG function: function code C; Formylmethanofuran dehydrogenase subunit C

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the molybdenum dinucleotide binding protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009010
- InterPro:   IPR012048
- InterPro:   IPR017550
- InterPro:   IPR002489
- InterPro:   IPR006657 [H]

Pfam domain/function: PF01493 GXGXG; PF01568 Molydop_binding [H]

EC number: =1.2.99.5 [H]

Molecular weight: Translated: 45542; Mature: 45542

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEK
CCEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHCEEEECCCCCCCCCCEEEEEECCCCC
DKADGRGGAPKDINEINIIINGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITI
CCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEECCCCEEECCCCCCCEEEE
NGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTGGTITINGNAGKNVATGLKGG
ECCCCCEECEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHCCCCCC
TITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK
EEEECCCHHHHCCEECCCCEEEECCCEEEEEEEEEECCEEEEEECCCCCCCCHHHHCCCC
DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGME
EEEEECCCEECCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCEEHHHHCCCCHH
ALLNTGSTVEQGAIIKGGEKYTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVA
HHHCCCCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCEEEECCCEEEEEECCCCCCEEE
VKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKGNSVFVEPIEKGNIIDAEQMI
EEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHH
KSMYW
HHHCC
>Mature Secondary Structure
MDIILTPTKKPDISIEADVISPDYFAGKTIDEIKSLEVWQGPIKLPLSDFFDVKIENNEK
CCEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHCEEEECCCCCCCCCCEEEEEECCCCC
DKADGRGGAPKDINEINIIINGDVDRIKYIGTEMTGGTITINGNTGIRIGSSMKGGSITI
CCCCCCCCCCCCCCEEEEEEECCCCEEEEEEEEECCCEEEEECCCCEEECCCCCCCEEEE
NGNAGSWTGMEMKGGSITINGNAGDYIGCAYRGSWEGMTGGTITINGNAGKNVATGLKGG
ECCCCCEECEEECCCEEEEECCCCCEEEEEEECCCCCCCCCEEEECCCCCCCHHCCCCCC
TITINGDVDEFCGIRQNGGLIVINGNVTRTVGVEMTKGTLVVCGNIRGFAPGFEQIGVEK
EEEECCCHHHHCCEECCCCEEEECCCEEEEEEEEEECCEEEEEECCCCCCCCHHHHCCCC
DIVLKDGTKINGKFLKFKGDIAIVPKPKGILYVSEENNIGLADPSKYTTFKEYHYKGGME
EEEEECCCEECCEEEEEECCEEEEECCCEEEEEECCCCCCCCCCCCCCEEHHHHCCCCHH
ALLNTGSTVEQGAIIKGGEKYTKEYVEECAVCHIHPEDYRILGAPTYVKIISNDKKSEVA
HHHCCCCCCCCCCEEECCHHHHHHHHHHCEEEEECCCCEEEECCCEEEEEECCCCCCEEE
VKAVSDDGLHKGTIFMPRSIWANAITGSHTDSCGSPLYKGNSVFVEPIEKGNIIDAEQMI
EEEECCCCCCCCEEEECHHHHHHCCCCCCCCCCCCCCCCCCEEEEEECCCCCEECHHHHH
KSMYW
HHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]