| Definition | Methanococcus aeolicus Nankai-3, complete genome. |
|---|---|
| Accession | NC_009635 |
| Length | 1,569,500 |
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The map label for this gene is 150400456
Identifier: 150400456
GI number: 150400456
Start: 19421
End: 19747
Strand: Direct
Name: 150400456
Synonym: Maeo_0017
Alternate gene names: NA
Gene position: 19421-19747 (Clockwise)
Preceding gene: 150400452
Following gene: 150400457
Centisome position: 1.24
GC content: 28.44
Gene sequence:
>327_bases ATGAGTGTAAATTTAAAAAATGCAAAAATGATTAGAATATATATAAAAGAACAAGACGAACATGCCCACATGAAATTATA TAAATATATAGTGGAAAAACTTAAAGAATATAATATTTCTGGTGCCACAATATTTAAAGGAATAAATGGCTATGGGGAGA GGGGAACTGCAAATATTGATATAATAAGGTTATCCATGGATTTACCTGTTGTTATTGAATGTATCGACGAGATAGAAAAA ATAGATAAAATATTGGGGGAATTGGTTGAGATAATAGGAGATAATGGATTAATTGCCGTTGTTGATGTGAATATAGTTTC CAAATAA
Upstream 100 bases:
>100_bases TTGCTCTGAAAAATTTATATTATCGTAAAAATCGCTTTGCGATTTTGAGACGGTTTAGTGAAAAAGTCCGAAGATTGACC ATATAAAAAAGAGGGACAAT
Downstream 100 bases:
>100_bases TAATAGGGCAATTAAAACAATCATATATAATTAAATAAGTGGGTGAAATTGTGGATTTTTCATATATATTAAATAAAAAA GCTAGAATACAGGAAAAAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 108; Mature: 107
Protein sequence:
>108_residues MSVNLKNAKMIRIYIKEQDEHAHMKLYKYIVEKLKEYNISGATIFKGINGYGERGTANIDIIRLSMDLPVVIECIDEIEK IDKILGELVEIIGDNGLIAVVDVNIVSK
Sequences:
>Translated_108_residues MSVNLKNAKMIRIYIKEQDEHAHMKLYKYIVEKLKEYNISGATIFKGINGYGERGTANIDIIRLSMDLPVVIECIDEIEK IDKILGELVEIIGDNGLIAVVDVNIVSK >Mature_107_residues SVNLKNAKMIRIYIKEQDEHAHMKLYKYIVEKLKEYNISGATIFKGINGYGERGTANIDIIRLSMDLPVVIECIDEIEKI DKILGELVEIIGDNGLIAVVDVNIVSK
Specific function: Unknown
COG id: COG1993
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0166 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003793 - InterPro: IPR011322 - InterPro: IPR015867 [H]
Pfam domain/function: PF02641 DUF190 [H]
EC number: NA
Molecular weight: Translated: 12193; Mature: 12061
Theoretical pI: Translated: 5.20; Mature: 5.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVNLKNAKMIRIYIKEQDEHAHMKLYKYIVEKLKEYNISGATIFKGINGYGERGTANID CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCCCEE IIRLSMDLPVVIECIDEIEKIDKILGELVEIIGDNGLIAVVDVNIVSK EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC >Mature Secondary Structure SVNLKNAKMIRIYIKEQDEHAHMKLYKYIVEKLKEYNISGATIFKGINGYGERGTANID CCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCHHEECCCCCCCCCCCCCEE IIRLSMDLPVVIECIDEIEKIDKILGELVEIIGDNGLIAVVDVNIVSK EEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]