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The map label for this gene is rpl10e

Identifier: 150400452

GI number: 150400452

Start: 15586

End: 16107

Strand: Direct

Name: rpl10e

Synonym: Maeo_0013

Alternate gene names: 150400452

Gene position: 15586-16107 (Clockwise)

Preceding gene: 150400451

Following gene: 150400456

Centisome position: 0.99

GC content: 32.95

Gene sequence:

>522_bases
ATGGCACTAAGACCAAGTAAATGTTATAGAGAAATTAATAAACCAGCATACACAAGAAAAAAATATATTAGGGCTGTTCC
ACAACCAAAAGTTGTTCATTATGTTAATGGAAACAAAGGTGGAGATTTCCCTGTGGAAGTTCATTTAGTTGTTAAAGATG
ATATTCAAATAAGACATAATGCATTGGAATCAGCAAGGATTGTAGGAAATAAATACACTCAAAATAAATGCGGTAGATTG
GGATACAAATTCCAAATAAGAGTATATCCTCACCAAGTATTGAGGGAAAATAAAATGGCATCAGGAGCTGGTGCAGATAG
GATTTCCGATGGAATGAGATTATCATTCGGAAAAGCTGTTGGAACAGCTGCAAGAGTTAGAAAAGGGCAAAAAATTATTA
CAATTTCAACAACTCCTGAAAATGTAATACACGCAAAAGAAGCTTTAAGAAGATGCAACATGAAAATGCCTGTAAAATGT
AAAATAGTAATTGGAAAGGGAGCAGAATTAGTAAAAAATTAA

Upstream 100 bases:

>100_bases
TGTGTGTAGTATCCCACATTAAATTAATTGTTTAGAACAGTAAAAAGAGACAGTTTTGAAGATTAACTATAAAACACGAT
TTACTAAGAGAGGAGAAATT

Downstream 100 bases:

>100_bases
ATTAATTTCTTTTTTTATTTTTATTATATTTTATTTTTGTTATATTTTTTTTTAAAAATAATATTTAATGGTATATTATA
TTAATTATATTATTTTATAT

Product: 50S ribosomal protein L10e

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 173; Mature: 172

Protein sequence:

>173_residues
MALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNGNKGGDFPVEVHLVVKDDIQIRHNALESARIVGNKYTQNKCGRL
GYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAVGTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKC
KIVIGKGAELVKN

Sequences:

>Translated_173_residues
MALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNGNKGGDFPVEVHLVVKDDIQIRHNALESARIVGNKYTQNKCGRL
GYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAVGTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKC
KIVIGKGAELVKN
>Mature_172_residues
ALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNGNKGGDFPVEVHLVVKDDIQIRHNALESARIVGNKYTQNKCGRLG
YKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAVGTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKCK
IVIGKGAELVKN

Specific function: Unknown

COG id: COG0197

COG function: function code J; Ribosomal protein L16/L10E

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L10e family

Homologues:

Organism=Homo sapiens, GI18152783, Length=175, Percent_Identity=42.2857142857143, Blast_Score=133, Evalue=7e-32,
Organism=Homo sapiens, GI223890243, Length=175, Percent_Identity=41.7142857142857, Blast_Score=131, Evalue=4e-31,
Organism=Caenorhabditis elegans, GI17533037, Length=175, Percent_Identity=38.2857142857143, Blast_Score=120, Evalue=4e-28,
Organism=Saccharomyces cerevisiae, GI6323104, Length=170, Percent_Identity=45.2941176470588, Blast_Score=129, Evalue=3e-31,
Organism=Drosophila melanogaster, GI221513696, Length=175, Percent_Identity=40.5714285714286, Blast_Score=130, Evalue=5e-31,
Organism=Drosophila melanogaster, GI221513692, Length=175, Percent_Identity=40.5714285714286, Blast_Score=130, Evalue=5e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL10_META3 (A6USY4)

Other databases:

- EMBL:   CP000743
- RefSeq:   YP_001324218.1
- ProteinModelPortal:   A6USY4
- SMR:   A6USY4
- STRING:   A6USY4
- GeneID:   5326844
- GenomeReviews:   CP000743_GR
- KEGG:   mae:Maeo_0013
- eggNOG:   arNOG08034
- HOGENOM:   HBG512729
- OMA:   YTRREYI
- ProtClustDB:   PRK04199
- BioCyc:   MAEO419665:MAEO_0013-MONOMER
- GO:   GO:0005840
- GO:   GO:0006412
- HAMAP:   MF_00448
- InterPro:   IPR001197
- InterPro:   IPR016180
- InterPro:   IPR022981
- InterPro:   IPR018255
- PANTHER:   PTHR11726
- PIRSF:   PIRSF005590
- TIGRFAMs:   TIGR00279

Pfam domain/function: PF00252 Ribosomal_L16; SSF54686 Ribosomal_L10e/L16

EC number: NA

Molecular weight: Translated: 19413; Mature: 19282

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: PS01257 RIBOSOMAL_L10E

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNGNKGGDFPVEVHLVVKDDIQIRHN
CCCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHH
ALESARIVGNKYTQNKCGRLGYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAV
HHHHHHHHCCCCCCCHHCCCCEEEEEEECCHHHHHHCCCCCCCCCCHHCCCCEEECCHHH
GTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKCKIVIGKGAELVKN
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCC
>Mature Secondary Structure 
ALRPSKCYREINKPAYTRKKYIRAVPQPKVVHYVNGNKGGDFPVEVHLVVKDDIQIRHN
CCCHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEECCCCCCCCEEEEEEEECCCHHHHH
ALESARIVGNKYTQNKCGRLGYKFQIRVYPHQVLRENKMASGAGADRISDGMRLSFGKAV
HHHHHHHHCCCCCCCHHCCCCEEEEEEECCHHHHHHCCCCCCCCCCHHCCCCEEECCHHH
GTAARVRKGQKIITISTTPENVIHAKEALRRCNMKMPVKCKIVIGKGAELVKN
HHHHHHHCCCEEEEEECCCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA