| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400329
Identifier: 150400329
GI number: 150400329
Start: 1609034
End: 1609570
Strand: Reverse
Name: 150400329
Synonym: Mevan_1592
Alternate gene names: NA
Gene position: 1609570-1609034 (Counterclockwise)
Preceding gene: 150400336
Following gene: 150400322
Centisome position: 93.58
GC content: 26.63
Gene sequence:
>537_bases ATGGCATCCCAAGACGACATCCTCTATGAATTTTACAATAATGATGGAATACTTTCAACTGATGAATTAAAGAAAATTTC TAAAATACCAAAGGAGGAAAGTATTAGGAGCATTTCAAAAACATTGAATTCTTTAATTCATAAAAAATTAATTGGAAAAG TAAAGGGGCCTAAAAACAGCACTATCTATTTTCTTACAAATCCGTACTACTTCATATGTGACGACGATGAAAGAATCTTA CATGAAAAAAATCACTGCTTAAATGTAATAAAGAAGGTTATGGAACATCATGATGGATGTATTGTTTACGAAAGAAAAAA TATGGTCATACTAAAGTTTAATGCAACATACCAAATACGTAATCACTTAAAATTAATAAAATCAGTAATAGATACTTTTG GAAACTGTTTAAAGTATGTACTACATGATAATTACATCATAATAACTGGAAAAACGCATTTGGAAATAGATATGTTCAAT ATCAATCTTTTTTTAAATGAGAAAAAAGAACATATGTTTCAAAAAAGTTTAAAATAA
Upstream 100 bases:
>100_bases TAGTAACATAATTCTTCGGATTAGAAACTGACTAAAGAATTACATAGGAAATAAACATTATTTAAATTTTACATAGATTC AATAATTTGGAAAGAAAAAA
Downstream 100 bases:
>100_bases GGGATAATTACTGATATTAAATTTAATAGATAAAAATTAAATGCCATATATCTCATCGGCATCTAATACTTCAGTATCGT GATCTTTTAAAACTTTAATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 178; Mature: 177
Protein sequence:
>178_residues MASQDDILYEFYNNDGILSTDELKKISKIPKEESIRSISKTLNSLIHKKLIGKVKGPKNSTIYFLTNPYYFICDDDERIL HEKNHCLNVIKKVMEHHDGCIVYERKNMVILKFNATYQIRNHLKLIKSVIDTFGNCLKYVLHDNYIIITGKTHLEIDMFN INLFLNEKKEHMFQKSLK
Sequences:
>Translated_178_residues MASQDDILYEFYNNDGILSTDELKKISKIPKEESIRSISKTLNSLIHKKLIGKVKGPKNSTIYFLTNPYYFICDDDERIL HEKNHCLNVIKKVMEHHDGCIVYERKNMVILKFNATYQIRNHLKLIKSVIDTFGNCLKYVLHDNYIIITGKTHLEIDMFN INLFLNEKKEHMFQKSLK >Mature_177_residues ASQDDILYEFYNNDGILSTDELKKISKIPKEESIRSISKTLNSLIHKKLIGKVKGPKNSTIYFLTNPYYFICDDDERILH EKNHCLNVIKKVMEHHDGCIVYERKNMVILKFNATYQIRNHLKLIKSVIDTFGNCLKYVLHDNYIIITGKTHLEIDMFNI NLFLNEKKEHMFQKSLK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20998; Mature: 20867
Theoretical pI: Translated: 9.06; Mature: 9.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 4.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASQDDILYEFYNNDGILSTDELKKISKIPKEESIRSISKTLNSLIHKKLIGKVKGPKNS CCCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TIYFLTNPYYFICDDDERILHEKNHCLNVIKKVMEHHDGCIVYERKNMVILKFNATYQIR EEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHH NHLKLIKSVIDTFGNCLKYVLHDNYIIITGKTHLEIDMFNINLFLNEKKEHMFQKSLK HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEEEEECCHHHHHHHHHCC >Mature Secondary Structure ASQDDILYEFYNNDGILSTDELKKISKIPKEESIRSISKTLNSLIHKKLIGKVKGPKNS CCCCCEEEEEECCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC TIYFLTNPYYFICDDDERILHEKNHCLNVIKKVMEHHDGCIVYERKNMVILKFNATYQIR EEEEEECCEEEEECCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEECCHHHHH NHLKLIKSVIDTFGNCLKYVLHDNYIIITGKTHLEIDMFNINLFLNEKKEHMFQKSLK HHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEEEEEEEECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA