| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400218
Identifier: 150400218
GI number: 150400218
Start: 1501368
End: 1502978
Strand: Reverse
Name: 150400218
Synonym: Mevan_1479
Alternate gene names: NA
Gene position: 1502978-1501368 (Counterclockwise)
Preceding gene: 150400219
Following gene: 150400217
Centisome position: 87.38
GC content: 32.65
Gene sequence:
>1611_bases ATGGACAAAGATATTGATATTGAAATATTAACTATTCTTTCAGAATCATCTGAACCTGTTGGGGCAAAAATAATTGCAAA CATGCTCAAACAGAGAGGTTACGATATAGGCGAACGTGCAGTCCGTTACCACCTGCAAACACTCGATGAAAATAACCTTA CTATTAGATTAGGCTATTCTGGAAGAGAAATTACTGAAAAAGGAATTGAGGAGCTTGAAAAAGCGAATATTTCGTATAGA ATCGGTTCAACATTTTCTCACGTTCTTGATATGATTTACATTTCAGATTTTCCATCAAAAGTTATAATAAACACTGCAAC GTACCAAGGAGAATATAAAAAAATAAAAGAATTAATTTATAAATCTTTTGAAGCAGGCTACTGTGTTGGGGACTACCTTA CAATTAAGAAAAAAGGAGATTCCACATCTGTAGAAACCCTATGCAGTGTTAACTTTGACAATTTTCTTCTTAAAAACGGT ATAATATCACTTCCAAAATATGGGGGAATTGTAAAATTTGAAGATTATGAGCCAGTAAACTTTGAAGGAATAATAGACTT TAGAAGTTCATCAATTGACCCTTTAGTTGCGTTTATCACCCAGAAAAAAACCAATGTTTTAGGAGTAATTGAAAACGGAG AAGGATTTGTTCCTGCAAATTTTAGGGCAATTCCCAAATCATGCGAGGAAAAATTTGAAAGAATTGTAAAAAATAACATG TTAAATTCAGTTTTAGCATATGATACTGAAAATGTTCTTGGTATGGGCTTAAATCAGGATGAAATAGGGGTCGTATTGGT TGGAGGACTAACTCCGCTTTGCATACCTTATGAATTAGGGTATCCGATGCATATTGCCGAAGCAACTACTATTAAAGATA TGTCTACTCTTGATACTCGGGCAAAAGGATACTTAACTCCAAAAAATAAGAAGGGAAATTACAGCGTAACTCCCGTATTA TCAAAAATGCTATCTTTAATGCAAGTTGTAAATTACGATATGGAAAGTCATAGTGGAAACGTTATAGTAAACGGTGCAAA GGTTCCAATAAGGTATCGGGAAGAAACAATTAATGCATTGAAAGAAAGTTATGAAAAAAAGCTTGCAATTTCCAACGTTT TAAAAATAGAATATGATAGTGAATTCATGAATATTTATACAATATGCTCCCTTACAGTTAATGGAGTATTTTTGAAAAAC AAAATTCCTGTAATTCCATATTATGGTGGAGTTTTAGAGATAAAACCGGATAAAAATCGATTTATTGAAGCAATCGCATA TGAAGGTACATCACTTAATCCTCATGAAGTATTTTTTAATAAAGGTGACGGTAAAAAATACATTTTAGCAGGCATAAGTA AAGTTCCACTTTCTGCAAATGAACAGTTTAGAGCAATTACTGAAAAACTTAATTGGAACTCAGTTATTGAAATTGGGAGG CCAAATAATGACATTTGTGGCGTAAGGGTTGAAAAATGCATGTTTGGAATTACAACAATTGGAGGAGTTAATCCTTTTTC AAACGTGAACAGCCTTGGTATACCCATTGAAGTAAAAACGCTGCACAAATCAATGGATTACTCAAATCTTACAAATTATG AAGAAATTTAA
Upstream 100 bases:
>100_bases ATAAAATTTAACGAGTAAATCCAATAATTTTAACGATTTAATATAGCTAAAAATAAATTTTTGCAGTCTTTATGGCGATT TTTAAGTTAAAGGTGGCGTT
Downstream 100 bases:
>100_bases ATTAATTAGATATTTAGTTTAAGGAGATAAAATGGGAAAAAAGGATAAAAGATGGGTTCTTCAAAGAAAAAAAGACCCTT ATTATAATTTAGCTAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 536; Mature: 536
Protein sequence:
>536_residues MDKDIDIEILTILSESSEPVGAKIIANMLKQRGYDIGERAVRYHLQTLDENNLTIRLGYSGREITEKGIEELEKANISYR IGSTFSHVLDMIYISDFPSKVIINTATYQGEYKKIKELIYKSFEAGYCVGDYLTIKKKGDSTSVETLCSVNFDNFLLKNG IISLPKYGGIVKFEDYEPVNFEGIIDFRSSSIDPLVAFITQKKTNVLGVIENGEGFVPANFRAIPKSCEEKFERIVKNNM LNSVLAYDTENVLGMGLNQDEIGVVLVGGLTPLCIPYELGYPMHIAEATTIKDMSTLDTRAKGYLTPKNKKGNYSVTPVL SKMLSLMQVVNYDMESHSGNVIVNGAKVPIRYREETINALKESYEKKLAISNVLKIEYDSEFMNIYTICSLTVNGVFLKN KIPVIPYYGGVLEIKPDKNRFIEAIAYEGTSLNPHEVFFNKGDGKKYILAGISKVPLSANEQFRAITEKLNWNSVIEIGR PNNDICGVRVEKCMFGITTIGGVNPFSNVNSLGIPIEVKTLHKSMDYSNLTNYEEI
Sequences:
>Translated_536_residues MDKDIDIEILTILSESSEPVGAKIIANMLKQRGYDIGERAVRYHLQTLDENNLTIRLGYSGREITEKGIEELEKANISYR IGSTFSHVLDMIYISDFPSKVIINTATYQGEYKKIKELIYKSFEAGYCVGDYLTIKKKGDSTSVETLCSVNFDNFLLKNG IISLPKYGGIVKFEDYEPVNFEGIIDFRSSSIDPLVAFITQKKTNVLGVIENGEGFVPANFRAIPKSCEEKFERIVKNNM LNSVLAYDTENVLGMGLNQDEIGVVLVGGLTPLCIPYELGYPMHIAEATTIKDMSTLDTRAKGYLTPKNKKGNYSVTPVL SKMLSLMQVVNYDMESHSGNVIVNGAKVPIRYREETINALKESYEKKLAISNVLKIEYDSEFMNIYTICSLTVNGVFLKN KIPVIPYYGGVLEIKPDKNRFIEAIAYEGTSLNPHEVFFNKGDGKKYILAGISKVPLSANEQFRAITEKLNWNSVIEIGR PNNDICGVRVEKCMFGITTIGGVNPFSNVNSLGIPIEVKTLHKSMDYSNLTNYEEI >Mature_536_residues MDKDIDIEILTILSESSEPVGAKIIANMLKQRGYDIGERAVRYHLQTLDENNLTIRLGYSGREITEKGIEELEKANISYR IGSTFSHVLDMIYISDFPSKVIINTATYQGEYKKIKELIYKSFEAGYCVGDYLTIKKKGDSTSVETLCSVNFDNFLLKNG IISLPKYGGIVKFEDYEPVNFEGIIDFRSSSIDPLVAFITQKKTNVLGVIENGEGFVPANFRAIPKSCEEKFERIVKNNM LNSVLAYDTENVLGMGLNQDEIGVVLVGGLTPLCIPYELGYPMHIAEATTIKDMSTLDTRAKGYLTPKNKKGNYSVTPVL SKMLSLMQVVNYDMESHSGNVIVNGAKVPIRYREETINALKESYEKKLAISNVLKIEYDSEFMNIYTICSLTVNGVFLKN KIPVIPYYGGVLEIKPDKNRFIEAIAYEGTSLNPHEVFFNKGDGKKYILAGISKVPLSANEQFRAITEKLNWNSVIEIGR PNNDICGVRVEKCMFGITTIGGVNPFSNVNSLGIPIEVKTLHKSMDYSNLTNYEEI
Specific function: Unknown
COG id: COG1693
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002846 - InterPro: IPR013668 - InterPro: IPR011991 [H]
Pfam domain/function: PF01995 DUF128; PF08461 HTH_12 [H]
EC number: NA
Molecular weight: Translated: 59990; Mature: 59990
Theoretical pI: Translated: 5.62; Mature: 5.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKDIDIEILTILSESSEPVGAKIIANMLKQRGYDIGERAVRYHLQTLDENNLTIRLGYS CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCC GREITEKGIEELEKANISYRIGSTFSHVLDMIYISDFPSKVIINTATYQGEYKKIKELIY CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHH KSFEAGYCVGDYLTIKKKGDSTSVETLCSVNFDNFLLKNGIISLPKYGGIVKFEDYEPVN HHCCCCEEEECEEEEEECCCCCCHHHHEECCCCHHHHHCCCEECCCCCCEEEECCCCCCC FEGIIDFRSSSIDPLVAFITQKKTNVLGVIENGEGFVPANFRAIPKSCEEKFERIVKNNM EEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH LNSVLAYDTENVLGMGLNQDEIGVVLVGGLTPLCIPYELGYPMHIAEATTIKDMSTLDTR HHHHHHCCCCCCEECCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCHHHHHHHHHHC AKGYLTPKNKKGNYSVTPVLSKMLSLMQVVNYDMESHSGNVIVNGAKVPIRYREETINAL CCCEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEHHHHHHHH KESYEKKLAISNVLKIEYDSEFMNIYTICSLTVNGVFLKNKIPVIPYYGGVLEIKPDKNR HHHHHHHHHHHHEEEEEECCHHEEEEEEEEEEECCEEEECCCCEEEECCCEEEECCCHHH FIEAIAYEGTSLNPHEVFFNKGDGKKYILAGISKVPLSANEQFRAITEKLNWNSVIEIGR HEEEEEECCCCCCCCEEEEECCCCCEEEEECCEECCCCCCHHHHHHHHHCCCCCEEEECC PNNDICGVRVEKCMFGITTIGGVNPFSNVNSLGIPIEVKTLHKSMDYSNLTNYEEI CCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MDKDIDIEILTILSESSEPVGAKIIANMLKQRGYDIGERAVRYHLQTLDENNLTIRLGYS CCCCCCEEEEEEECCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCEEEEECCC GREITEKGIEELEKANISYRIGSTFSHVLDMIYISDFPSKVIINTATYQGEYKKIKELIY CCHHHHHHHHHHHHCCCEEEECCHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHH KSFEAGYCVGDYLTIKKKGDSTSVETLCSVNFDNFLLKNGIISLPKYGGIVKFEDYEPVN HHCCCCEEEECEEEEEECCCCCCHHHHEECCCCHHHHHCCCEECCCCCCEEEECCCCCCC FEGIIDFRSSSIDPLVAFITQKKTNVLGVIENGEGFVPANFRAIPKSCEEKFERIVKNNM EEEEEEECCCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHH LNSVLAYDTENVLGMGLNQDEIGVVLVGGLTPLCIPYELGYPMHIAEATTIKDMSTLDTR HHHHHHCCCCCCEECCCCCCCCCEEEECCCCCEEEEEECCCCEEECCCCHHHHHHHHHHC AKGYLTPKNKKGNYSVTPVLSKMLSLMQVVNYDMESHSGNVIVNGAKVPIRYREETINAL CCCEECCCCCCCCEEECHHHHHHHHHHHHHCCCCCCCCCCEEEECCCCCEEEHHHHHHHH KESYEKKLAISNVLKIEYDSEFMNIYTICSLTVNGVFLKNKIPVIPYYGGVLEIKPDKNR HHHHHHHHHHHHEEEEEECCHHEEEEEEEEEEECCEEEECCCCEEEECCCEEEECCCHHH FIEAIAYEGTSLNPHEVFFNKGDGKKYILAGISKVPLSANEQFRAITEKLNWNSVIEIGR HEEEEEECCCCCCCCEEEEECCCCCEEEEECCEECCCCCCHHHHHHHHHCCCCCEEEECC PNNDICGVRVEKCMFGITTIGGVNPFSNVNSLGIPIEVKTLHKSMDYSNLTNYEEI CCCCCCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCEEEHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]