Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150400178

Identifier: 150400178

GI number: 150400178

Start: 1464153

End: 1464635

Strand: Reverse

Name: 150400178

Synonym: Mevan_1439

Alternate gene names: NA

Gene position: 1464635-1464153 (Counterclockwise)

Preceding gene: 150400179

Following gene: 150400175

Centisome position: 85.15

GC content: 30.43

Gene sequence:

>483_bases
ATGAAAGTATCAGAATCTGGAAAATGCCTTTCATACTTTGTAGAATCGTTTAAATCAGAATTACAGCTTAAAAAACCTGA
AAAAATAGTTTATATGGGTTCAAAAGGCGTTTGTTTTTCAATGGCTCAGCTTTTCGGCTATTCAGTTAGAGATTTCGTAA
AAAATCAGTATTTTATTCCTGAAACGGAAATAAACAAATCAGTTGAATATGAACTAACTGACATTGGATATCGATTTTTT
GGAATTTCCAACATTAAAAAATTGAATAATCCAGATTATCTAATAATAATGGGGGGTATCGCAACAAAACATAGTAATTC
AACGCCTGAAGATGCTCGCTTATTAATTAAAAAGATAGTGCCTGAAAAAATAGTTGGTATAAGCATTTGTAACGTTTTAA
AAACTTCTGGATGGGCTGAAAAAATCGATTTTGATATAATTATTGACGGAACCCTTGACCCTGTAACAGTATATAAAAAA
TAG

Upstream 100 bases:

>100_bases
TAAATATTTTATTTTGTATAGTTATTTTAGATAATTTAATTTGGATAAGTTAATTTGTATTTTACGTTACATACTCATTT
AAATTTTTTTAGGTGGAATC

Downstream 100 bases:

>100_bases
TTTTAAAGTAGTTTTTAATTTTTTTAAGACTATTTATTTTGAAACTATTTATAAAATAAACCTAAAAAATAATCCTTTTT
TTAAATAGATGAAAAAATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 160; Mature: 160

Protein sequence:

>160_residues
MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIPETEINKSVEYELTDIGYRFF
GISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIVPEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK

Sequences:

>Translated_160_residues
MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIPETEINKSVEYELTDIGYRFF
GISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIVPEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK
>Mature_160_residues
MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIPETEINKSVEYELTDIGYRFF
GISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIVPEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK

Specific function: Unknown

COG id: COG4090

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.thermoautotrophicum MTH862 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009183 [H]

Pfam domain/function: PF09897 DUF2124 [H]

EC number: NA

Molecular weight: Translated: 18126; Mature: 18126

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIP
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCC
ETEINKSVEYELTDIGYRFFGISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIV
CCCCCCCEEEEEHCCCEEEECCCCHHHCCCCCEEEEECCEEECCCCCCCHHHHHHHHHHC
PEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK
HHHHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEEEECC
>Mature Secondary Structure
MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIP
CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCC
ETEINKSVEYELTDIGYRFFGISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIV
CCCCCCCEEEEEHCCCEEEECCCCHHHCCCCCEEEEECCEEECCCCCCCHHHHHHHHHHC
PEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK
HHHHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]