| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150400178
Identifier: 150400178
GI number: 150400178
Start: 1464153
End: 1464635
Strand: Reverse
Name: 150400178
Synonym: Mevan_1439
Alternate gene names: NA
Gene position: 1464635-1464153 (Counterclockwise)
Preceding gene: 150400179
Following gene: 150400175
Centisome position: 85.15
GC content: 30.43
Gene sequence:
>483_bases ATGAAAGTATCAGAATCTGGAAAATGCCTTTCATACTTTGTAGAATCGTTTAAATCAGAATTACAGCTTAAAAAACCTGA AAAAATAGTTTATATGGGTTCAAAAGGCGTTTGTTTTTCAATGGCTCAGCTTTTCGGCTATTCAGTTAGAGATTTCGTAA AAAATCAGTATTTTATTCCTGAAACGGAAATAAACAAATCAGTTGAATATGAACTAACTGACATTGGATATCGATTTTTT GGAATTTCCAACATTAAAAAATTGAATAATCCAGATTATCTAATAATAATGGGGGGTATCGCAACAAAACATAGTAATTC AACGCCTGAAGATGCTCGCTTATTAATTAAAAAGATAGTGCCTGAAAAAATAGTTGGTATAAGCATTTGTAACGTTTTAA AAACTTCTGGATGGGCTGAAAAAATCGATTTTGATATAATTATTGACGGAACCCTTGACCCTGTAACAGTATATAAAAAA TAG
Upstream 100 bases:
>100_bases TAAATATTTTATTTTGTATAGTTATTTTAGATAATTTAATTTGGATAAGTTAATTTGTATTTTACGTTACATACTCATTT AAATTTTTTTAGGTGGAATC
Downstream 100 bases:
>100_bases TTTTAAAGTAGTTTTTAATTTTTTTAAGACTATTTATTTTGAAACTATTTATAAAATAAACCTAAAAAATAATCCTTTTT TTAAATAGATGAAAAAATAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 160; Mature: 160
Protein sequence:
>160_residues MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIPETEINKSVEYELTDIGYRFF GISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIVPEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK
Sequences:
>Translated_160_residues MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIPETEINKSVEYELTDIGYRFF GISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIVPEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK >Mature_160_residues MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIPETEINKSVEYELTDIGYRFF GISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIVPEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK
Specific function: Unknown
COG id: COG4090
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To M.thermoautotrophicum MTH862 [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009183 [H]
Pfam domain/function: PF09897 DUF2124 [H]
EC number: NA
Molecular weight: Translated: 18126; Mature: 18126
Theoretical pI: Translated: 8.75; Mature: 8.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIP CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCC ETEINKSVEYELTDIGYRFFGISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIV CCCCCCCEEEEEHCCCEEEECCCCHHHCCCCCEEEEECCEEECCCCCCCHHHHHHHHHHC PEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK HHHHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEEEECC >Mature Secondary Structure MKVSESGKCLSYFVESFKSELQLKKPEKIVYMGSKGVCFSMAQLFGYSVRDFVKNQYFIP CCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHHCCCCCCC ETEINKSVEYELTDIGYRFFGISNIKKLNNPDYLIIMGGIATKHSNSTPEDARLLIKKIV CCCCCCCEEEEEHCCCEEEECCCCHHHCCCCCEEEEECCEEECCCCCCCHHHHHHHHHHC PEKIVGISICNVLKTSGWAEKIDFDIIIDGTLDPVTVYKK HHHHHHHHHHHHHHCCCCCHHCCEEEEECCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]