Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150400175

Identifier: 150400175

GI number: 150400175

Start: 1461643

End: 1462056

Strand: Reverse

Name: 150400175

Synonym: Mevan_1435

Alternate gene names: NA

Gene position: 1462056-1461643 (Counterclockwise)

Preceding gene: 150400178

Following gene: 150400174

Centisome position: 85.0

GC content: 28.74

Gene sequence:

>414_bases
ATGGACTACATTTTTGAATACCTCTTGAATAACTATTCTCACCTTAAAAACAACTCAAAAATAGTTGTTGCTGAAATTGG
AATTGGATTTTATGTTGAAATTTCAAAAAAAATGCAAAAGTCAGGATTTAACGTAATTGCAATCGATTCAAATGAAAAAG
CAGTTATTGAAGCTTTTCAACATGGTTTAAACTCTAAAATGGATGATATTTTTAAGCCTGACCTTAAAATATATAAAAAT
ATAAAATTAATATATTCAATAAGGCCCCCAAGGGATTTACAGCCATATTTACTTAATCTTTCCAAAAATATAAATTGTGA
TCTTGTAATAAAACCCCTTAGCGGTGAAGAACCAATTTCGGAGCTAAAACTCGTAAACTACTTTGGAAAGCCACTTTATA
TCTGGAAAAAATGA

Upstream 100 bases:

>100_bases
GCATTTAATAATATTGTATTTAACTTATAAAAAACTAAAGAGTTTAAGTTATGTAATGATTTTAAGAATATTAAATTAAT
CATTAAAATTTAGGGATATT

Downstream 100 bases:

>100_bases
TTATATTTACGATAAAAGCTAAAATCATAATTACTATTACTAGCTTTATCGTTTAATGGCCATACGTGAAAGTTTATAAG
GGATTTATTACATAACTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQHGLNSKMDDIFKPDLKIYKN
IKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPISELKLVNYFGKPLYIWKK

Sequences:

>Translated_137_residues
MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQHGLNSKMDDIFKPDLKIYKN
IKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPISELKLVNYFGKPLYIWKK
>Mature_137_residues
MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQHGLNSKMDDIFKPDLKIYKN
IKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPISELKLVNYFGKPLYIWKK

Specific function: Unknown

COG id: COG1255

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0146 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005353
- ProDom:   PD021130 [H]

Pfam domain/function: PF03686 UPF0146 [H]

EC number: NA

Molecular weight: Translated: 15903; Mature: 15903

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQ
CHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHCCCEEEEECCCCHHHHHHHH
HGLNSKMDDIFKPDLKIYKNIKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPIS
HCCCCCCHHHHCCCHHHHCCEEEEEEECCCCCCCHHEEECCCCCCEEEEEECCCCCCCHH
ELKLVNYFGKPLYIWKK
HHHHHHHCCCEEEEEEC
>Mature Secondary Structure
MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQ
CHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHCCCEEEEECCCCHHHHHHHH
HGLNSKMDDIFKPDLKIYKNIKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPIS
HCCCCCCHHHHCCCHHHHCCEEEEEEECCCCCCCHHEEECCCCCCEEEEEECCCCCCCHH
ELKLVNYFGKPLYIWKK
HHHHHHHCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]