| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150400175
Identifier: 150400175
GI number: 150400175
Start: 1461643
End: 1462056
Strand: Reverse
Name: 150400175
Synonym: Mevan_1435
Alternate gene names: NA
Gene position: 1462056-1461643 (Counterclockwise)
Preceding gene: 150400178
Following gene: 150400174
Centisome position: 85.0
GC content: 28.74
Gene sequence:
>414_bases ATGGACTACATTTTTGAATACCTCTTGAATAACTATTCTCACCTTAAAAACAACTCAAAAATAGTTGTTGCTGAAATTGG AATTGGATTTTATGTTGAAATTTCAAAAAAAATGCAAAAGTCAGGATTTAACGTAATTGCAATCGATTCAAATGAAAAAG CAGTTATTGAAGCTTTTCAACATGGTTTAAACTCTAAAATGGATGATATTTTTAAGCCTGACCTTAAAATATATAAAAAT ATAAAATTAATATATTCAATAAGGCCCCCAAGGGATTTACAGCCATATTTACTTAATCTTTCCAAAAATATAAATTGTGA TCTTGTAATAAAACCCCTTAGCGGTGAAGAACCAATTTCGGAGCTAAAACTCGTAAACTACTTTGGAAAGCCACTTTATA TCTGGAAAAAATGA
Upstream 100 bases:
>100_bases GCATTTAATAATATTGTATTTAACTTATAAAAAACTAAAGAGTTTAAGTTATGTAATGATTTTAAGAATATTAAATTAAT CATTAAAATTTAGGGATATT
Downstream 100 bases:
>100_bases TTATATTTACGATAAAAGCTAAAATCATAATTACTATTACTAGCTTTATCGTTTAATGGCCATACGTGAAAGTTTATAAG GGATTTATTACATAACTATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 137; Mature: 137
Protein sequence:
>137_residues MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQHGLNSKMDDIFKPDLKIYKN IKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPISELKLVNYFGKPLYIWKK
Sequences:
>Translated_137_residues MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQHGLNSKMDDIFKPDLKIYKN IKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPISELKLVNYFGKPLYIWKK >Mature_137_residues MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQHGLNSKMDDIFKPDLKIYKN IKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPISELKLVNYFGKPLYIWKK
Specific function: Unknown
COG id: COG1255
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0146 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005353 - ProDom: PD021130 [H]
Pfam domain/function: PF03686 UPF0146 [H]
EC number: NA
Molecular weight: Translated: 15903; Mature: 15903
Theoretical pI: Translated: 9.42; Mature: 9.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQ CHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHCCCEEEEECCCCHHHHHHHH HGLNSKMDDIFKPDLKIYKNIKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPIS HCCCCCCHHHHCCCHHHHCCEEEEEEECCCCCCCHHEEECCCCCCEEEEEECCCCCCCHH ELKLVNYFGKPLYIWKK HHHHHHHCCCEEEEEEC >Mature Secondary Structure MDYIFEYLLNNYSHLKNNSKIVVAEIGIGFYVEISKKMQKSGFNVIAIDSNEKAVIEAFQ CHHHHHHHHHHHHHCCCCCEEEEEECCCEEEEEEHHHHHHCCCEEEEECCCCHHHHHHHH HGLNSKMDDIFKPDLKIYKNIKLIYSIRPPRDLQPYLLNLSKNINCDLVIKPLSGEEPIS HCCCCCCHHHHCCCHHHHCCEEEEEEECCCCCCCHHEEECCCCCCEEEEEECCCCCCCHH ELKLVNYFGKPLYIWKK HHHHHHHCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]