| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is iorA [H]
Identifier: 150400069
GI number: 150400069
Start: 1351239
End: 1353086
Strand: Reverse
Name: iorA [H]
Synonym: Mevan_1327
Alternate gene names: 150400069
Gene position: 1353086-1351239 (Counterclockwise)
Preceding gene: 150400071
Following gene: 150400068
Centisome position: 78.67
GC content: 34.36
Gene sequence:
>1848_bases TTGACCAGTAACAAGTTTTTAATGGGAAATGAAGCAATTGCTCTTTCAGCGATTGCCTCAGGAGTACAGTTTGCTACAGG GTATCCTGGAACTCCTTCAACAGAAGTAATGGAAACTTTGATAAAAAATGCAAAAAAGTACGGTTACTATGTAGAATGGG CTACAAATGAAAAAGTGGCCCTTGAAACTGCAATCGGAGCATCATTCTCAGGAACTGATACAATTGTTACTATGAAACAA GTTGGATTAAATGTTGCATCTGACCCGTTAATGAGTTTAACGTATTTAGGAGTAAAAGGTGCTCTTGTATTATTGGTAAC GGATGATCCGGGGCCCCATTCATCCCAGACCGAGCAAGACACTAGGTCATTTGGACTTTTTTCAAATGTTCCGGTAATTG ACCCTTCTGATTCAAAAGAAGCATACAAAATGACGAAATATGCATTTGAACTTTCAAAAAAGTACGAAACTCCAGTAATT TTAAGAACTACGACAAGGGTTTCACACCGGTGCGATGACGTATTAGTTGATGATTTAAATAAAATACCTTTTAAAACATC TGGTTTTTCTAAAGATTCAAGATGGGCAATTTTTCCAAGATTAACGGCAGAAAGACATCCTGTATTAGAAGCCTTGCAAA ATACATTATCTGAGGAATTTTCAAATTCAAACTTCAACTTTATTCAGGGAACTGGAAAAATTGGAATCATTACATCAGGC GCTTCATATCACTACGTGGTTGAATCTATTTCAAATAATAAGCACGATTTTTCCATTTTAAAAATAGGAACGCCCTACCC ATTTCCGGAAAAAAAAGTATTTGAGTTTATAAACAGTGTAGATTGCATTTTAATAGTCGAAGAACTCGATCCATATTTAG AAGACCAGACTTTAAAATTAATTGGAAAATTAGGAATTAATAAACCAGTTTATGGAAAATATAATAAGTATTTCCCTTGT TGTGGTGAATATAACGTTAAATTAGTACTAGATGGAATAAATAAAGTATTAGAATCCTTAAATTATGAAAAAATAAAATT TTCAAATGTAATTGATACTCAAAATGTAAATGTGCCTCTTCCAGTACGTCCGCCAACATTATGTGCAGGTTGTATGCATA GGACAGTATTTTACGGTTTTAAGAAAGTTTCAAAAGAGTTTGAAAAAAAAGGTATTCAAACAATATTTTCTGGCGATATA GGGTGTTATACGTTAGGTAATGCTCCCCCTATTGAATTAATCGATACTTGCATTTGCATGGGTGCAGGAATAAGCGTTGC ATCCGGTATTTCAAAAACTTCAAAGAATTCAAAGAATGTCGCATTTATAGGGGACTCTACATTTTTCCATTCTGGAATTC CTGCAGTAATTAGTGCAGTTTACAATAAGTCGGATATAACTATTGCAGTTTTAGATAATAGAACAACTGCAATGACTGGG CATCAACCGCATCCGGGAACTGGAAAAACAGCTGGATTTGAGGATACAAAACTAATAGAAATTGAAGGAATTTTAAAAAG TTGCGGATTGGATTTTGTAAAATCAGTTTCTACCGAGAATTTGGATGAGTGTATAAATGTTTCAAGAGAATCTATTGAAT ATAATGGGCCTTCCGCAGTAGTATTTAGAGGAAACTGTGTTTCACTGGTAAAATCAAAACTAAAATGTAGGGTAGATACA GAAAAATGCACTGGATGCAAAATCTGTTTTGAAGAGCTAGGGTGCCCTGCAATAGTAATGGATAGAGATATTCCAAATAT AACATCTAATTGTATAGCATGTGGATTATGTGTGGCAGTATGTCCTTTTAACGCCATAATTAACGAGGGAAATTGTTATG AGCTTTAA
Upstream 100 bases:
>100_bases AAGTCTATTTAGTAATAGATAATAAAGATAAGTTCAATTTTAAATTATCGTGATTTACTATTATGTTTTAAAGCAGTTTT AAAATAAAAAGAGGGATTTT
Downstream 100 bases:
>100_bases TGTATTGATTTGTGGAGTAGGTGGGCAAGGTATTGTTTTAGCTTCAAGACTTGTTGCAGTTACCGCTATGAATGAGGGTT ACACTGTAAATACTGCTGAA
Product: thiamine pyrophosphate binding domain-containing protein
Products: NA
Alternate protein names: IOR; Indolepyruvate ferredoxin oxidoreductase subunit alpha [H]
Number of amino acids: Translated: 615; Mature: 614
Protein sequence:
>615_residues MTSNKFLMGNEAIALSAIASGVQFATGYPGTPSTEVMETLIKNAKKYGYYVEWATNEKVALETAIGASFSGTDTIVTMKQ VGLNVASDPLMSLTYLGVKGALVLLVTDDPGPHSSQTEQDTRSFGLFSNVPVIDPSDSKEAYKMTKYAFELSKKYETPVI LRTTTRVSHRCDDVLVDDLNKIPFKTSGFSKDSRWAIFPRLTAERHPVLEALQNTLSEEFSNSNFNFIQGTGKIGIITSG ASYHYVVESISNNKHDFSILKIGTPYPFPEKKVFEFINSVDCILIVEELDPYLEDQTLKLIGKLGINKPVYGKYNKYFPC CGEYNVKLVLDGINKVLESLNYEKIKFSNVIDTQNVNVPLPVRPPTLCAGCMHRTVFYGFKKVSKEFEKKGIQTIFSGDI GCYTLGNAPPIELIDTCICMGAGISVASGISKTSKNSKNVAFIGDSTFFHSGIPAVISAVYNKSDITIAVLDNRTTAMTG HQPHPGTGKTAGFEDTKLIEIEGILKSCGLDFVKSVSTENLDECINVSRESIEYNGPSAVVFRGNCVSLVKSKLKCRVDT EKCTGCKICFEELGCPAIVMDRDIPNITSNCIACGLCVAVCPFNAIINEGNCYEL
Sequences:
>Translated_615_residues MTSNKFLMGNEAIALSAIASGVQFATGYPGTPSTEVMETLIKNAKKYGYYVEWATNEKVALETAIGASFSGTDTIVTMKQ VGLNVASDPLMSLTYLGVKGALVLLVTDDPGPHSSQTEQDTRSFGLFSNVPVIDPSDSKEAYKMTKYAFELSKKYETPVI LRTTTRVSHRCDDVLVDDLNKIPFKTSGFSKDSRWAIFPRLTAERHPVLEALQNTLSEEFSNSNFNFIQGTGKIGIITSG ASYHYVVESISNNKHDFSILKIGTPYPFPEKKVFEFINSVDCILIVEELDPYLEDQTLKLIGKLGINKPVYGKYNKYFPC CGEYNVKLVLDGINKVLESLNYEKIKFSNVIDTQNVNVPLPVRPPTLCAGCMHRTVFYGFKKVSKEFEKKGIQTIFSGDI GCYTLGNAPPIELIDTCICMGAGISVASGISKTSKNSKNVAFIGDSTFFHSGIPAVISAVYNKSDITIAVLDNRTTAMTG HQPHPGTGKTAGFEDTKLIEIEGILKSCGLDFVKSVSTENLDECINVSRESIEYNGPSAVVFRGNCVSLVKSKLKCRVDT EKCTGCKICFEELGCPAIVMDRDIPNITSNCIACGLCVAVCPFNAIINEGNCYEL >Mature_614_residues TSNKFLMGNEAIALSAIASGVQFATGYPGTPSTEVMETLIKNAKKYGYYVEWATNEKVALETAIGASFSGTDTIVTMKQV GLNVASDPLMSLTYLGVKGALVLLVTDDPGPHSSQTEQDTRSFGLFSNVPVIDPSDSKEAYKMTKYAFELSKKYETPVIL RTTTRVSHRCDDVLVDDLNKIPFKTSGFSKDSRWAIFPRLTAERHPVLEALQNTLSEEFSNSNFNFIQGTGKIGIITSGA SYHYVVESISNNKHDFSILKIGTPYPFPEKKVFEFINSVDCILIVEELDPYLEDQTLKLIGKLGINKPVYGKYNKYFPCC GEYNVKLVLDGINKVLESLNYEKIKFSNVIDTQNVNVPLPVRPPTLCAGCMHRTVFYGFKKVSKEFEKKGIQTIFSGDIG CYTLGNAPPIELIDTCICMGAGISVASGISKTSKNSKNVAFIGDSTFFHSGIPAVISAVYNKSDITIAVLDNRTTAMTGH QPHPGTGKTAGFEDTKLIEIEGILKSCGLDFVKSVSTENLDECINVSRESIEYNGPSAVVFRGNCVSLVKSKLKCRVDTE KCTGCKICFEELGCPAIVMDRDIPNITSNCIACGLCVAVCPFNAIINEGNCYEL
Specific function: Catalyzes the ferredoxin-dependent oxidative decarboxylation of arylpyruvates [H]
COG id: COG4231
COG function: function code C; Indolepyruvate ferredoxin oxidoreductase, alpha and beta subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017896 - InterPro: IPR017900 - InterPro: IPR017721 - InterPro: IPR002880 - InterPro: IPR011766 - InterPro: IPR009014 - InterPro: IPR015941 [H]
Pfam domain/function: PF01855 POR_N; PF02775 TPP_enzyme_C [H]
EC number: =1.2.7.8 [H]
Molecular weight: Translated: 67238; Mature: 67106
Theoretical pI: Translated: 6.25; Mature: 6.25
Prosite motif: PS00198 4FE4S_FERREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 3.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSNKFLMGNEAIALSAIASGVQFATGYPGTPSTEVMETLIKNAKKYGYYVEWATNEKVA CCCCCEEECCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEE LETAIGASFSGTDTIVTMKQVGLNVASDPLMSLTYLGVKGALVLLVTDDPGPHSSQTEQD EEEECCCCCCCCCCEEEHHHHCCCCCCCCHHHHEEECCCCEEEEEEECCCCCCCCCCHHH TRSFGLFSNVPVIDPSDSKEAYKMTKYAFELSKKYETPVILRTTTRVSHRCDDVLVDDLN HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH KIPFKTSGFSKDSRWAIFPRLTAERHPVLEALQNTLSEEFSNSNFNFIQGTGKIGIITSG CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECC ASYHYVVESISNNKHDFSILKIGTPYPFPEKKVFEFINSVDCILIVEELDPYLEDQTLKL CCEEEEEEHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHCHHHHHH IGKLGINKPVYGKYNKYFPCCGEYNVKLVLDGINKVLESLNYEKIKFSNVIDTQNVNVPL HHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCC PVRPPTLCAGCMHRTVFYGFKKVSKEFEKKGIQTIFSGDIGCYTLGNAPPIELIDTCICM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCHHHHHHHHHH GAGISVASGISKTSKNSKNVAFIGDSTFFHSGIPAVISAVYNKSDITIAVLDNRTTAMTG CCCCHHHHCCHHCCCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCEEEEEECCCEEEECC HQPHPGTGKTAGFEDTKLIEIEGILKSCGLDFVKSVSTENLDECINVSRESIEYNGPSAV CCCCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHHHCCCCCHHHHHHCCHHHEEECCCEEE VFRGNCVSLVKSKLKCRVDTEKCTGCKICFEELGCPAIVMDRDIPNITSNCIACGLCVAV EECCCHHHHHHHHHHEEECCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH CPFNAIINEGNCYEL CCHHHHCCCCCCCCC >Mature Secondary Structure TSNKFLMGNEAIALSAIASGVQFATGYPGTPSTEVMETLIKNAKKYGYYVEWATNEKVA CCCCEEECCCHHHHHHHHCCCCEECCCCCCCHHHHHHHHHHHHHHCCEEEEEECCCCEE LETAIGASFSGTDTIVTMKQVGLNVASDPLMSLTYLGVKGALVLLVTDDPGPHSSQTEQD EEEECCCCCCCCCCEEEHHHHCCCCCCCCHHHHEEECCCCEEEEEEECCCCCCCCCCHHH TRSFGLFSNVPVIDPSDSKEAYKMTKYAFELSKKYETPVILRTTTRVSHRCDDVLVDDLN HHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHHHHHHHHH KIPFKTSGFSKDSRWAIFPRLTAERHPVLEALQNTLSEEFSNSNFNFIQGTGKIGIITSG CCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECCCEEEEEECC ASYHYVVESISNNKHDFSILKIGTPYPFPEKKVFEFINSVDCILIVEELDPYLEDQTLKL CCEEEEEEHHCCCCCCEEEEEECCCCCCCHHHHHHHHCCCCEEEEEECCCCHHCHHHHHH IGKLGINKPVYGKYNKYFPCCGEYNVKLVLDGINKVLESLNYEKIKFSNVIDTQNVNVPL HHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHCCCCEEEECCCCCCCCCCCCC PVRPPTLCAGCMHRTVFYGFKKVSKEFEKKGIQTIFSGDIGCYTLGNAPPIELIDTCICM CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEECCCCCCHHHHHHHHHH GAGISVASGISKTSKNSKNVAFIGDSTFFHSGIPAVISAVYNKSDITIAVLDNRTTAMTG CCCCHHHHCCHHCCCCCCCEEEEECCCHHHCCHHHHHHHHHCCCCEEEEEECCCEEEECC HQPHPGTGKTAGFEDTKLIEIEGILKSCGLDFVKSVSTENLDECINVSRESIEYNGPSAV CCCCCCCCCCCCCCCCEEEEHHHHHHHCCHHHHHHCCCCCHHHHHHCCHHHEEECCCEEE VFRGNCVSLVKSKLKCRVDTEKCTGCKICFEELGCPAIVMDRDIPNITSNCIACGLCVAV EECCCHHHHHHHHHHEEECCCCCCCHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH CPFNAIINEGNCYEL CCHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9389475 [H]