| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
Click here to switch to the map view.
The map label for this gene is 150400024
Identifier: 150400024
GI number: 150400024
Start: 1307631
End: 1308287
Strand: Reverse
Name: 150400024
Synonym: Mevan_1282
Alternate gene names: NA
Gene position: 1308287-1307631 (Counterclockwise)
Preceding gene: 150400025
Following gene: 150400022
Centisome position: 76.06
GC content: 34.7
Gene sequence:
>657_bases ATGGAAAATGTTAAAAAAATTTTAAAACTGCTTCCAGGGTTTAATTGTGGGGCTTGCGGATACAAAAGATGCGATACTTT TGCAGAAGATATTCTTAAAGGAAAATCCGTAAATGACTGTCCATTTCTACTTAAAGAAGAATTTAAGGGCAATTTACAAA AAATTAACGATATAAAAGGTAGTTTAAAAGAGACTCCTAAAGTACCATTATGCAGTAGCGGTAAATTAAAAGGACTTCTT GATGGATATGAGGCAGATTTTTTATTAGATCCGCTTCCAAAAGAGCATTCATGTAGGGAAACTTTAATAATACTTTCAAA AACACCTATAAAAATGGGTGACCACATAAAATATCGGCCTCTTGCATGCCCCATACCGCATTTTGCAGAGATTATAGGTG AAAGCCATGGAATGTACGTAGTACATCTTGAAGGGCCATGTAATCGATTTTCGGATTCAAAAAAAGAGTATAAAGAAGTA GGAATTGCACTTATAGCTGCATTTGAAGGTATTTATAGAGGAAAACCTCCTGAAGTTGGAAAAACCGTTAAATTTATTCC GACGCACTGTATGATGCAAAAAGTGCATAGTGGAGTAGTTGTAGAGGTAGAAGGAAATAGGGTCTTAATTGAGGGAATTG ATTTAAAAGTCTGGTAA
Upstream 100 bases:
>100_bases GTCTGTACATTGTGCGTAGGCGAAACAAAAGTTGCTAAAAAACACCATAGAGGCGTTTTAAGAAGAATAGATGGTTTTAC CAAATATATTGGTGAATAGT
Downstream 100 bases:
>100_bases TTAAAATTAAGTACCTAAATAATAATTAAGTGCTAAAGTTAGTACATAATCCTGCATTAAAACCTTAAAAACCATAAGTT TTATTTATTTCAATATTTGC
Product: Fe-S cluster domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 218
Protein sequence:
>218_residues MENVKKILKLLPGFNCGACGYKRCDTFAEDILKGKSVNDCPFLLKEEFKGNLQKINDIKGSLKETPKVPLCSSGKLKGLL DGYEADFLLDPLPKEHSCRETLIILSKTPIKMGDHIKYRPLACPIPHFAEIIGESHGMYVVHLEGPCNRFSDSKKEYKEV GIALIAAFEGIYRGKPPEVGKTVKFIPTHCMMQKVHSGVVVEVEGNRVLIEGIDLKVW
Sequences:
>Translated_218_residues MENVKKILKLLPGFNCGACGYKRCDTFAEDILKGKSVNDCPFLLKEEFKGNLQKINDIKGSLKETPKVPLCSSGKLKGLL DGYEADFLLDPLPKEHSCRETLIILSKTPIKMGDHIKYRPLACPIPHFAEIIGESHGMYVVHLEGPCNRFSDSKKEYKEV GIALIAAFEGIYRGKPPEVGKTVKFIPTHCMMQKVHSGVVVEVEGNRVLIEGIDLKVW >Mature_218_residues MENVKKILKLLPGFNCGACGYKRCDTFAEDILKGKSVNDCPFLLKEEFKGNLQKINDIKGSLKETPKVPLCSSGKLKGLL DGYEADFLLDPLPKEHSCRETLIILSKTPIKMGDHIKYRPLACPIPHFAEIIGESHGMYVVHLEGPCNRFSDSKKEYKEV GIALIAAFEGIYRGKPPEVGKTVKFIPTHCMMQKVHSGVVVEVEGNRVLIEGIDLKVW
Specific function: Unknown
COG id: COG2000
COG function: function code R; Predicted Fe-S protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007202 [H]
Pfam domain/function: PF04060 FeS [H]
EC number: NA
Molecular weight: Translated: 24299; Mature: 24299
Theoretical pI: Translated: 8.32; Mature: 8.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 4.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENVKKILKLLPGFNCGACGYKRCDTFAEDILKGKSVNDCPFLLKEEFKGNLQKINDIKG CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHH SLKETPKVPLCSSGKLKGLLDGYEADFLLDPLPKEHSCRETLIILSKTPIKMGDHIKYRP HHHCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEECC LACPIPHFAEIIGESHGMYVVHLEGPCNRFSDSKKEYKEVGIALIAAFEGIYRGKPPEVG CCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC KTVKFIPTHCMMQKVHSGVVVEVEGNRVLIEGIDLKVW CEEEECHHHHHHHHHHCCEEEEECCCEEEEEECEEEEC >Mature Secondary Structure MENVKKILKLLPGFNCGACGYKRCDTFAEDILKGKSVNDCPFLLKEEFKGNLQKINDIKG CHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCHHHHHHHHHH SLKETPKVPLCSSGKLKGLLDGYEADFLLDPLPKEHSCRETLIILSKTPIKMGDHIKYRP HHHCCCCCCCCCCCCCCHHHCCCCCCEEECCCCCCCCCCCEEEEEECCCCCCCCCCEECC LACPIPHFAEIIGESHGMYVVHLEGPCNRFSDSKKEYKEVGIALIAAFEGIYRGKPPEVG CCCCCHHHHHHHCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCC KTVKFIPTHCMMQKVHSGVVVEVEGNRVLIEGIDLKVW CEEEECHHHHHHHHHHCCEEEEECCCEEEEEECEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]