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The map label for this gene is rpl12p

Identifier: 150400013

GI number: 150400013

Start: 1298591

End: 1298890

Strand: Reverse

Name: rpl12p

Synonym: Mevan_1271

Alternate gene names: 150400013

Gene position: 1298890-1298591 (Counterclockwise)

Preceding gene: 150400014

Following gene: 150400012

Centisome position: 75.51

GC content: 44.0

Gene sequence:

>300_bases
ATGGAATACATATACGCAGCATTATTATTAAATTCAGCAAACAAAGAAGTAACCGAAGAAGCAGTTAAAGCAGTTTTAGT
TGCAGGCGGTATCGAAGCTAACGATGCTAGAGTTAAAGCATTAGTTGCAGCATTGGAAGGCGTTGACATTGCAGAAGCTA
TCGCAAAAGCTGCTATCGCACCAGTTGCAGCTGCTGCTCCTGTTGCAGCTGCTGCTGCTCCAGCTGAAGTTAAAAAAGAA
GAAAAGAAGGAAGACACAACGGCTGCTGCAGCTGCAGGTCTTGGCGCTTTATTCATGTAA

Upstream 100 bases:

>100_bases
CTGCAGGTCTTGGATTACTCTTCTAAAATTTTACCGAAAAAAATATATATGGAAATAAATAATTTCAAAAAAGAGTTCAT
ACATCTTGGAGGTGTACTTT

Downstream 100 bases:

>100_bases
TAAAGCTAAATTCCATTCTTTTTATTTTACCAAAATTAATTTATATATTTAAATGTATAAACTATATATAAATATTTATA
TACTATATAAATAGAAAAAT

Product: 50S ribosomal protein L12P

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 99; Mature: 99

Protein sequence:

>99_residues
MEYIYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAIAKAAIAPVAAAAPVAAAAAPAEVKKE
EKKEDTTAAAAAGLGALFM

Sequences:

>Translated_99_residues
MEYIYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAIAKAAIAPVAAAAPVAAAAAPAEVKKE
EKKEDTTAAAAAGLGALFM
>Mature_99_residues
MEYIYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAIAKAAIAPVAAAAPVAAAAAPAEVKKE
EKKEDTTAAAAAGLGALFM

Specific function: Seems to be the binding site for several of the factors involved in protein synthesis and appears to be essential for accurate translation

COG id: COG2058

COG function: function code J; Ribosomal protein L12E/L44/L45/RPP1/RPP2

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L12P family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): RL12_METVA (P10623)

Other databases:

- EMBL:   J03187
- PIR:   B28152
- GO:   GO:0005840
- InterPro:   IPR001813
- InterPro:   IPR022295
- TIGRFAMs:   TIGR03685

Pfam domain/function: PF00428 Ribosomal_60s

EC number: NA

Molecular weight: Translated: 9818; Mature: 9818

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEYIYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAIAKAAIA
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
PVAAAAPVAAAAAPAEVKKEEKKEDTTAAAAAGLGALFM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEYIYAALLLNSANKEVTEEAVKAVLVAGGIEANDARVKALVAALEGVDIAEAIAKAAIA
CHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHH
PVAAAAPVAAAAAPAEVKKEEKKEDTTAAAAAGLGALFM
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2834382