| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is cadA [H]
Identifier: 150399974
GI number: 150399974
Start: 1261832
End: 1263922
Strand: Reverse
Name: cadA [H]
Synonym: Mevan_1231
Alternate gene names: 150399974
Gene position: 1263922-1261832 (Counterclockwise)
Preceding gene: 150399975
Following gene: 150399972
Centisome position: 73.48
GC content: 30.22
Gene sequence:
>2091_bases ATGTACCGACATTATGAACTAAAAGGGCTTTGTTGTGCAAATTGTGCTTTAAAAATCGAGAGAATCCTATGTGAAAACGG ATATCCTTCAGCAAGAATTAATTTTTCAACTTCAGAACTGTTATTCGCGGAAAAAAGCGTTGATATTAACTTTGTTAAAA AATTAATCCATTCAATAGAACCAGAAATTATATTAATAGAAAAAGAAAACTTAGATTATAAATTAAGTTCCAATTTAACA TTTAAAGACTTTGTTGATTTTAAGGAATTAAAAATTATCATATTTTCGCTTATCCTGTTTATTTTTGGTATTTTTGGAAG TTATTTAAATTTTGAACCGTTTATAGTATTGATGATTTTTTTAACTAGCTACATGATTTCAGGAAATAAGGTATTTAAAA AAACATTCAAAAATGTAAAAAGAGGAGACTTTTTTGATGAAAACTTTTTAATGACTATTGCAACAGTTGGTGCATTTTTA ATTCACGAATATCCTGAAGGCGTTGCAGTAATGCTTTTTTACCGAATAGGTGAATTTTTACAGGATTTAGCGGTTTCAAA ATCTCGAAGTTCTGTAAAATCATTATTGTCTTTAAAAGCAGAGTATGCAAACTTAAAAAAAGATGACAAACTTTTAAAGG TCAGTCCTGAAACCGTTAAAAAGGGCCAAATAATTATAATAAATCCTGGAGAAAAAACTCCTTTAGATGGGATAATTTTA AACGGAAATTCATCGATAGATGTTTCGGCATTAACTGGTGAAAGCTCACCAAGATATTTAAAAGATGGTGATGAAATATT ATCAGGAATGGTTAACCTTACAGGGCCACTTACTGTAAAAGTAACTAAAGAGTTTGAAGAATCAACAGTTTATAAAATTC TTGAATTAATAGAAACTGCAAATGTAAAAAAGGCAAAAACTGAAAAATTTGTAACCAAATTTGCTAGGTATTACACCCCT TTTATTGTATTTTTAGCATTTTTAGTCGTTGCAATACCAATACTAGCTTTTAATGAACCAATAATTCCTTGGGTTTATAA AGCTCTTGTTCTTTTGGTTATTTCATGCCCTTGTGCACTAGTTTTATCCATCCCTTTAAGTTACTTTGCAGGAATTGGTA AACTTTCAAAGGATGGAATACTGGTTAAAGGTTCAAATTACATAGATATGTTGAGTAAAACTAACTATGTAATATTCGAT AAAACAGGAACACTTACAAAAGGTAGCTTAAAAGTCAAGGAAGTATTTCCAAAAAACGGGTTTTCTAAAGAAGAATTAAT CGAAATTGCGATAACTTCTGAATCACGATCTAACCACCCCGTTGCAAAGGCCATTATATCCAAATATGGAACAAATAGAT TTTTCGAGTTTAGCGAATATAAGGAAATCCCTGGAAAAGGTATTGTTGCAAAGATACATGGTTTTGAAGTGATTTCAGGA AATGAAAAATTAATGGAAGAAAGCGGAATTGATGTAAAACCAATGGATTCTTTCGATATAGCGGTGCATTTTGCAATTGA TAAAAAGTATGCAGGATACATTTTAGTTTCTGATGAATTAAAAAAAGACTCAAAAAACGCCATTTTAGAATTAAAAAAGC TTGGAATCAAAAAAATTTCAATGTTTACGGGAGATAGTTATCCTGTTTCTAAAAAAATTTCAGAGGAAATTTCAATTGAT GAATTTTATTCAGATTTACTTCCAAAGGATAAAGTAACACTTTTAGAAGAAATTGAAAGAAAAAAAGACAAAAATGAATC AATTGTTTTTGTAGGGGAGGGAATTAACGACGCTCCAGCAATTAAAAGGGCAGATGTAGGGATATCAATGGGAACTCTTG GAAGCGATGCTGCAATTGAATCTTCAGACGTTGTGATTATGGATGATAATCCTTTAAAAGTAGCCCAGTCAATTAAACTA TCAAAAAGAACAAAAAATATCGTCTGGCAAAATATTTTCATGATTTTTGGAGTTAAAATAGCATTCATAACTCTTTCAAT ATTTGGTAGGGTAACAATGTGGGAAGCAGTATTTGCAGATGTGGGAATTACCATTATTTCAGTTTTAAACTCCCTTAGGA TTCTAAAATGA
Upstream 100 bases:
>100_bases TTTACGATGAAAAAATTAAGAAGTTTTTAGAAGTAATCCTTGAATTAAATAAATAAAAATGTATTATATAATTGTAAAAA AGTATTAAAAAGGTAGTAAA
Downstream 100 bases:
>100_bases AAAAATAAATAATTAAAAAGAATAAAAATAAATATTTATTTCCTGTGTTTTAACATTTCTAAACCTTTATCTGTTATTGT ATATCCGTCCCCGATTTTTG
Product: heavy metal translocating P-type ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 696; Mature: 696
Protein sequence:
>696_residues MYRHYELKGLCCANCALKIERILCENGYPSARINFSTSELLFAEKSVDINFVKKLIHSIEPEIILIEKENLDYKLSSNLT FKDFVDFKELKIIIFSLILFIFGIFGSYLNFEPFIVLMIFLTSYMISGNKVFKKTFKNVKRGDFFDENFLMTIATVGAFL IHEYPEGVAVMLFYRIGEFLQDLAVSKSRSSVKSLLSLKAEYANLKKDDKLLKVSPETVKKGQIIIINPGEKTPLDGIIL NGNSSIDVSALTGESSPRYLKDGDEILSGMVNLTGPLTVKVTKEFEESTVYKILELIETANVKKAKTEKFVTKFARYYTP FIVFLAFLVVAIPILAFNEPIIPWVYKALVLLVISCPCALVLSIPLSYFAGIGKLSKDGILVKGSNYIDMLSKTNYVIFD KTGTLTKGSLKVKEVFPKNGFSKEELIEIAITSESRSNHPVAKAIISKYGTNRFFEFSEYKEIPGKGIVAKIHGFEVISG NEKLMEESGIDVKPMDSFDIAVHFAIDKKYAGYILVSDELKKDSKNAILELKKLGIKKISMFTGDSYPVSKKISEEISID EFYSDLLPKDKVTLLEEIERKKDKNESIVFVGEGINDAPAIKRADVGISMGTLGSDAAIESSDVVIMDDNPLKVAQSIKL SKRTKNIVWQNIFMIFGVKIAFITLSIFGRVTMWEAVFADVGITIISVLNSLRILK
Sequences:
>Translated_696_residues MYRHYELKGLCCANCALKIERILCENGYPSARINFSTSELLFAEKSVDINFVKKLIHSIEPEIILIEKENLDYKLSSNLT FKDFVDFKELKIIIFSLILFIFGIFGSYLNFEPFIVLMIFLTSYMISGNKVFKKTFKNVKRGDFFDENFLMTIATVGAFL IHEYPEGVAVMLFYRIGEFLQDLAVSKSRSSVKSLLSLKAEYANLKKDDKLLKVSPETVKKGQIIIINPGEKTPLDGIIL NGNSSIDVSALTGESSPRYLKDGDEILSGMVNLTGPLTVKVTKEFEESTVYKILELIETANVKKAKTEKFVTKFARYYTP FIVFLAFLVVAIPILAFNEPIIPWVYKALVLLVISCPCALVLSIPLSYFAGIGKLSKDGILVKGSNYIDMLSKTNYVIFD KTGTLTKGSLKVKEVFPKNGFSKEELIEIAITSESRSNHPVAKAIISKYGTNRFFEFSEYKEIPGKGIVAKIHGFEVISG NEKLMEESGIDVKPMDSFDIAVHFAIDKKYAGYILVSDELKKDSKNAILELKKLGIKKISMFTGDSYPVSKKISEEISID EFYSDLLPKDKVTLLEEIERKKDKNESIVFVGEGINDAPAIKRADVGISMGTLGSDAAIESSDVVIMDDNPLKVAQSIKL SKRTKNIVWQNIFMIFGVKIAFITLSIFGRVTMWEAVFADVGITIISVLNSLRILK >Mature_696_residues MYRHYELKGLCCANCALKIERILCENGYPSARINFSTSELLFAEKSVDINFVKKLIHSIEPEIILIEKENLDYKLSSNLT FKDFVDFKELKIIIFSLILFIFGIFGSYLNFEPFIVLMIFLTSYMISGNKVFKKTFKNVKRGDFFDENFLMTIATVGAFL IHEYPEGVAVMLFYRIGEFLQDLAVSKSRSSVKSLLSLKAEYANLKKDDKLLKVSPETVKKGQIIIINPGEKTPLDGIIL NGNSSIDVSALTGESSPRYLKDGDEILSGMVNLTGPLTVKVTKEFEESTVYKILELIETANVKKAKTEKFVTKFARYYTP FIVFLAFLVVAIPILAFNEPIIPWVYKALVLLVISCPCALVLSIPLSYFAGIGKLSKDGILVKGSNYIDMLSKTNYVIFD KTGTLTKGSLKVKEVFPKNGFSKEELIEIAITSESRSNHPVAKAIISKYGTNRFFEFSEYKEIPGKGIVAKIHGFEVISG NEKLMEESGIDVKPMDSFDIAVHFAIDKKYAGYILVSDELKKDSKNAILELKKLGIKKISMFTGDSYPVSKKISEEISID EFYSDLLPKDKVTLLEEIERKKDKNESIVFVGEGINDAPAIKRADVGISMGTLGSDAAIESSDVVIMDDNPLKVAQSIKL SKRTKNIVWQNIFMIFGVKIAFITLSIFGRVTMWEAVFADVGITIISVLNSLRILK
Specific function: Couples the hydrolysis of ATP with the transport of cadmium, zinc and cobalt out of the cell. Does not seem to transport copper [H]
COG id: COG2217
COG function: function code P; Cation transport ATPase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HMA domain [H]
Homologues:
Organism=Homo sapiens, GI55743071, Length=782, Percent_Identity=26.4705882352941, Blast_Score=263, Evalue=5e-70, Organism=Homo sapiens, GI115529486, Length=591, Percent_Identity=29.9492385786802, Blast_Score=247, Evalue=2e-65, Organism=Homo sapiens, GI55743073, Length=539, Percent_Identity=28.5714285714286, Blast_Score=225, Evalue=1e-58, Organism=Escherichia coli, GI1789879, Length=700, Percent_Identity=31.1428571428571, Blast_Score=334, Evalue=1e-92, Organism=Escherichia coli, GI1786691, Length=739, Percent_Identity=26.3870094722598, Blast_Score=250, Evalue=3e-67, Organism=Escherichia coli, GI1786914, Length=503, Percent_Identity=24.0556660039761, Blast_Score=131, Evalue=2e-31, Organism=Caenorhabditis elegans, GI17556548, Length=676, Percent_Identity=27.3668639053254, Blast_Score=212, Evalue=4e-55, Organism=Caenorhabditis elegans, GI17541776, Length=192, Percent_Identity=28.125, Blast_Score=69, Evalue=7e-12, Organism=Caenorhabditis elegans, GI17557486, Length=103, Percent_Identity=30.0970873786408, Blast_Score=69, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71995298, Length=213, Percent_Identity=23.4741784037559, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71995291, Length=213, Percent_Identity=23.4741784037559, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71995286, Length=213, Percent_Identity=23.4741784037559, Blast_Score=67, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6320475, Length=544, Percent_Identity=30.3308823529412, Blast_Score=220, Evalue=5e-58, Organism=Saccharomyces cerevisiae, GI6319772, Length=523, Percent_Identity=26.1950286806883, Blast_Score=165, Evalue=3e-41, Organism=Saccharomyces cerevisiae, GI6325221, Length=635, Percent_Identity=21.4173228346457, Blast_Score=100, Evalue=8e-22, Organism=Saccharomyces cerevisiae, GI6321430, Length=610, Percent_Identity=20.8196721311475, Blast_Score=91, Evalue=9e-19, Organism=Saccharomyces cerevisiae, GI6321271, Length=218, Percent_Identity=27.9816513761468, Blast_Score=74, Evalue=8e-14, Organism=Saccharomyces cerevisiae, GI6320245, Length=202, Percent_Identity=25.2475247524752, Blast_Score=70, Evalue=8e-13, Organism=Saccharomyces cerevisiae, GI6320243, Length=202, Percent_Identity=25.2475247524752, Blast_Score=70, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320244, Length=202, Percent_Identity=25.2475247524752, Blast_Score=70, Evalue=9e-13, Organism=Drosophila melanogaster, GI221329854, Length=352, Percent_Identity=28.9772727272727, Blast_Score=152, Evalue=8e-37, Organism=Drosophila melanogaster, GI281366676, Length=117, Percent_Identity=30.7692307692308, Blast_Score=67, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008250 - InterPro: IPR001366 - InterPro: IPR006404 - InterPro: IPR006416 - InterPro: IPR001757 - InterPro: IPR018303 - InterPro: IPR005834 - InterPro: IPR023214 - InterPro: IPR017969 - InterPro: IPR006121 [H]
Pfam domain/function: PF00122 E1-E2_ATPase; PF00403 HMA; PF00702 Hydrolase [H]
EC number: =3.6.3.3; =3.6.3.5 [H]
Molecular weight: Translated: 77945; Mature: 77945
Theoretical pI: Translated: 8.60; Mature: 8.60
Prosite motif: PS00154 ATPASE_E1_E2 ; PS01047 HMA_1 ; PS50846 HMA_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYRHYELKGLCCANCALKIERILCENGYPSARINFSTSELLFAEKSVDINFVKKLIHSIE CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHEEEEECCCCHHHHHHHHHHCC PEIILIEKENLDYKLSSNLTFKDFVDFKELKIIIFSLILFIFGIFGSYLNFEPFIVLMIF CCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LTSYMISGNKVFKKTFKNVKRGDFFDENFLMTIATVGAFLIHEYPEGVAVMLFYRIGEFL HHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QDLAVSKSRSSVKSLLSLKAEYANLKKDDKLLKVSPETVKKGQIIIINPGEKTPLDGIIL HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCEEEEECCCCCCCCCEEEE NGNSSIDVSALTGESSPRYLKDGDEILSGMVNLTGPLTVKVTKEFEESTVYKILELIETA CCCCCEEEEEECCCCCCCHHCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHC NVKKAKTEKFVTKFARYYTPFIVFLAFLVVAIPILAFNEPIIPWVYKALVLLVISCPCAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VLSIPLSYFAGIGKLSKDGILVKGSNYIDMLSKTNYVIFDKTGTLTKGSLKVKEVFPKNG HHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCEEEEECCCCEECCCEEEEEECCCCC FSKEELIEIAITSESRSNHPVAKAIISKYGTNRFFEFSEYKEIPGKGIVAKIHGFEVISG CCHHHEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECHHHHCCCCCCEEEEEECEEEECC NEKLMEESGIDVKPMDSFDIAVHFAIDKKYAGYILVSDELKKDSKNAILELKKLGIKKIS CHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCHHHHHHHHHHCCCEEEE MFTGDSYPVSKKISEEISIDEFYSDLLPKDKVTLLEEIERKKDKNESIVFVGEGINDAPA EECCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC IKRADVGISMGTLGSDAAIESSDVVIMDDNPLKVAQSIKLSKRTKNIVWQNIFMIFGVKI CEECCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFITLSIFGRVTMWEAVFADVGITIISVLNSLRILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYRHYELKGLCCANCALKIERILCENGYPSARINFSTSELLFAEKSVDINFVKKLIHSIE CCCEEECCCCHHHHHHHHHHHHHHCCCCCCEEEECCHHHEEEEECCCCHHHHHHHHHHCC PEIILIEKENLDYKLSSNLTFKDFVDFKELKIIIFSLILFIFGIFGSYLNFEPFIVLMIF CCEEEEEECCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH LTSYMISGNKVFKKTFKNVKRGDFFDENFLMTIATVGAFLIHEYPEGVAVMLFYRIGEFL HHHHHHCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH QDLAVSKSRSSVKSLLSLKAEYANLKKDDKLLKVSPETVKKGQIIIINPGEKTPLDGIIL HHHHHCCHHHHHHHHHHHHHHHHCCCCCCCEEEECHHHHCCCEEEEECCCCCCCCCEEEE NGNSSIDVSALTGESSPRYLKDGDEILSGMVNLTGPLTVKVTKEFEESTVYKILELIETA CCCCCEEEEEECCCCCCCHHCCHHHHHHHHHCCCCCEEEEEECHHHHHHHHHHHHHHHHC NVKKAKTEKFVTKFARYYTPFIVFLAFLVVAIPILAFNEPIIPWVYKALVLLVISCPCAL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH VLSIPLSYFAGIGKLSKDGILVKGSNYIDMLSKTNYVIFDKTGTLTKGSLKVKEVFPKNG HHHHHHHHHHCCCCCCCCCEEEECCCHHHHHCCCCEEEEECCCCEECCCEEEEEECCCCC FSKEELIEIAITSESRSNHPVAKAIISKYGTNRFFEFSEYKEIPGKGIVAKIHGFEVISG CCHHHEEEEEEECCCCCCCHHHHHHHHHHCCCCCEECHHHHCCCCCCEEEEEECEEEECC NEKLMEESGIDVKPMDSFDIAVHFAIDKKYAGYILVSDELKKDSKNAILELKKLGIKKIS CHHHHHHCCCCCCCCCCCCEEEEEEEECCCCCEEEEEHHHCCCHHHHHHHHHHCCCEEEE MFTGDSYPVSKKISEEISIDEFYSDLLPKDKVTLLEEIERKKDKNESIVFVGEGINDAPA EECCCCCCCHHHHHHHCCHHHHHHHHCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCC IKRADVGISMGTLGSDAAIESSDVVIMDDNPLKVAQSIKLSKRTKNIVWQNIFMIFGVKI CEECCCCEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AFITLSIFGRVTMWEAVFADVGITIISVLNSLRILK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]