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The map label for this gene is 150399962

Identifier: 150399962

GI number: 150399962

Start: 1243733

End: 1244806

Strand: Reverse

Name: 150399962

Synonym: Mevan_1219

Alternate gene names: NA

Gene position: 1244806-1243733 (Counterclockwise)

Preceding gene: 150399963

Following gene: 150399958

Centisome position: 72.37

GC content: 33.61

Gene sequence:

>1074_bases
ATGGATGATTCCAAAGAGTTAAACAGGTTAAACAAGGCAAGGGCCCTTATTAAAAATAAATTAGATTGTAGCGGAAGAAA
TGGAATTTATGACCTGACTGGCCTTTCCGGAGGATTTGAAATTAGTAAAAATTATCTAAATTTACTTGAAACCTATGTTG
GGCCTGCAATATTTTCTGAGAAAATAAATGAGCTAGGAGTAAAACATCTTTCAGGACATGAAGGGGCCCATGGTGCAGCA
TGTTTTAACAGGACATCTTCTGCAATTTTATCAACGATTATGACCCTTTCAAAATCTTTTAAAAACGTTGTCCATTTTGT
TCCTGAAAGACCCTCCCACCCTTCAATTCCTAAAAGTTGCAATATTTTTGGAATGAAATACTTTGAAAGTGATTTAAAAG
ATGAGATAATCTCAAAAATAGATAATGAAACAGTAACGGTAATTACTGGAGCTACGATGGATCATAAAATAACTTCAAGA
GATATTGCCGAGGATTTAATAAATATTGCAAAAAATAAGGGTTCAATAACATTTTTTGACGATGCATCTGGTGCAAGACT
TAGAAAACTCCATAATGAACCGCCGGCACTTGAAATGGGTGCAGATTTAGTAGTTACAAGCATGGATAAATTAATGAAAG
GCCCAAGAGCAGGATTACTTGCTGGAAATAAAGAATTAGTAGATAAAATTTACTCTGAAGGATTAAAATTTGGACTTGAA
GCCCAATCTCCAATAATGGCTGCAGTTATAAAAGCAATTGAAGATTTTGACATTGAAGAATTAAAAAGAGCATTTAAAAG
AGCAGAACATATCGATTTAAATGTTTTTAACAAAGAAGGAGTTTCTTATCAAAAGACGCCCACAGGATTTTTAATAAAAG
GCATTTCTGAAGAACAAGCCATTACTTCAGCAATGAATCTTCTTGAAAATTTTGGCATTATCACGATTGCTGCTGCGGGA
ATGCCCGGGGCAAGTAAAACTCTAAGAATAGACTTTTGTTCAAAAGATGCAGATAAAATCTCTGATGAGTATATTATAAA
TGCAATTTTGGCATCTAACCCATTAAAAAAATAA

Upstream 100 bases:

>100_bases
TAAACGGGGAAAATATTGACTTAAGCTCTGGAGGAAGTGAAGGTTCCTGTGGAGCCGGTTAATTATATCGTACATAATTT
TGAAATGTAAGGTGCGTTTT

Downstream 100 bases:

>100_bases
AATTTTAAATTTAAATTAATTTTTTTAGTTCTTCGGGCCTATGTAATTCGCCACCAATTTTTCCAGATAATACTACATCG
CATTTTGCGTACTTCATTAC

Product: L-seryl-tRNA selenium transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 357; Mature: 357

Protein sequence:

>357_residues
MDDSKELNRLNKARALIKNKLDCSGRNGIYDLTGLSGGFEISKNYLNLLETYVGPAIFSEKINELGVKHLSGHEGAHGAA
CFNRTSSAILSTIMTLSKSFKNVVHFVPERPSHPSIPKSCNIFGMKYFESDLKDEIISKIDNETVTVITGATMDHKITSR
DIAEDLINIAKNKGSITFFDDASGARLRKLHNEPPALEMGADLVVTSMDKLMKGPRAGLLAGNKELVDKIYSEGLKFGLE
AQSPIMAAVIKAIEDFDIEELKRAFKRAEHIDLNVFNKEGVSYQKTPTGFLIKGISEEQAITSAMNLLENFGIITIAAAG
MPGASKTLRIDFCSKDADKISDEYIINAILASNPLKK

Sequences:

>Translated_357_residues
MDDSKELNRLNKARALIKNKLDCSGRNGIYDLTGLSGGFEISKNYLNLLETYVGPAIFSEKINELGVKHLSGHEGAHGAA
CFNRTSSAILSTIMTLSKSFKNVVHFVPERPSHPSIPKSCNIFGMKYFESDLKDEIISKIDNETVTVITGATMDHKITSR
DIAEDLINIAKNKGSITFFDDASGARLRKLHNEPPALEMGADLVVTSMDKLMKGPRAGLLAGNKELVDKIYSEGLKFGLE
AQSPIMAAVIKAIEDFDIEELKRAFKRAEHIDLNVFNKEGVSYQKTPTGFLIKGISEEQAITSAMNLLENFGIITIAAAG
MPGASKTLRIDFCSKDADKISDEYIINAILASNPLKK
>Mature_357_residues
MDDSKELNRLNKARALIKNKLDCSGRNGIYDLTGLSGGFEISKNYLNLLETYVGPAIFSEKINELGVKHLSGHEGAHGAA
CFNRTSSAILSTIMTLSKSFKNVVHFVPERPSHPSIPKSCNIFGMKYFESDLKDEIISKIDNETVTVITGATMDHKITSR
DIAEDLINIAKNKGSITFFDDASGARLRKLHNEPPALEMGADLVVTSMDKLMKGPRAGLLAGNKELVDKIYSEGLKFGLE
AQSPIMAAVIKAIEDFDIEELKRAFKRAEHIDLNVFNKEGVSYQKTPTGFLIKGISEEQAITSAMNLLENFGIITIAAAG
MPGASKTLRIDFCSKDADKISDEYIINAILASNPLKK

Specific function: Unknown

COG id: COG1921

COG function: function code E; Selenocysteine synthase [seryl-tRNASer selenium transferase]

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0425 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020033
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR018319 [H]

Pfam domain/function: PF03841 SelA [H]

EC number: NA

Molecular weight: Translated: 39061; Mature: 39061

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDDSKELNRLNKARALIKNKLDCSGRNGIYDLTGLSGGFEISKNYLNLLETYVGPAIFSE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KINELGVKHLSGHEGAHGAACFNRTSSAILSTIMTLSKSFKNVVHFVPERPSHPSIPKSC
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NIFGMKYFESDLKDEIISKIDNETVTVITGATMDHKITSRDIAEDLINIAKNKGSITFFD
CEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
DASGARLRKLHNEPPALEMGADLVVTSMDKLMKGPRAGLLAGNKELVDKIYSEGLKFGLE
CCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AQSPIMAAVIKAIEDFDIEELKRAFKRAEHIDLNVFNKEGVSYQKTPTGFLIKGISEEQA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCCHHHH
ITSAMNLLENFGIITIAAAGMPGASKTLRIDFCSKDADKISDEYIINAILASNPLKK
HHHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MDDSKELNRLNKARALIKNKLDCSGRNGIYDLTGLSGGFEISKNYLNLLETYVGPAIFSE
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHHHHHHHHHH
KINELGVKHLSGHEGAHGAACFNRTSSAILSTIMTLSKSFKNVVHFVPERPSHPSIPKSC
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
NIFGMKYFESDLKDEIISKIDNETVTVITGATMDHKITSRDIAEDLINIAKNKGSITFFD
CEEEHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCCEEEEE
DASGARLRKLHNEPPALEMGADLVVTSMDKLMKGPRAGLLAGNKELVDKIYSEGLKFGLE
CCCCHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCC
AQSPIMAAVIKAIEDFDIEELKRAFKRAEHIDLNVFNKEGVSYQKTPTGFLIKGISEEQA
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCCHHHH
ITSAMNLLENFGIITIAAAGMPGASKTLRIDFCSKDADKISDEYIINAILASNPLKK
HHHHHHHHHHCCEEEEEECCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA