| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399958
Identifier: 150399958
GI number: 150399958
Start: 1238777
End: 1239862
Strand: Reverse
Name: 150399958
Synonym: Mevan_1215
Alternate gene names: NA
Gene position: 1239862-1238777 (Counterclockwise)
Preceding gene: 150399962
Following gene: 150399957
Centisome position: 72.08
GC content: 30.66
Gene sequence:
>1086_bases ATGAAATTTGGATGGATAATGTCAAGTTCCTCTGACATTGAAGAAAGAAAAGATACAGTTAAAGATTCTCTTGAAAGTTC AATTCCTGCAATTATTGTTAAAAAAGATGAAATTAGTACAGTAAGGGAATTAGGAAGCATTGAAATAATTTCAGATAGTT TAGATGCGGATATTGTTTTAGTGACTAAAAAAGATGATTTAGATATTTTAAAATCTGCAAAAGATTCTGGAAAAAAAACT TGCGTATATATTACAATTGAAACAAAAGAAGATGAAATTTACGCAACTAAAGTAAGCAGACTTGATTTTGTAGATTACAT AATTTTAGAAGGTAAAGACTGGACAATTATTCCTCTTGAAAATATTATTGCCGACTTATTTAATGAAGATATAAAAATTG TATCTTTAGTAAATAATGTAAATGATGCAAAAGCTGCTTACGAAATTTTAGAAAAGGGCGTTGATGGAGTAGTGCTTGTA CCAAAAGATATCAATGAAGTAAAAGAATTTTCAAAATTAATAGATAGTATGAATTTTGAAAATGTAGCTCTTGATTATGC GGTAATTAAAAAAATTGAACCAGTTGGAAGTGGCGATCGGGTTTGTATTGACACCTGTTCAATTATGGAAATCGGGGAAG GCATGTTAATTGGGTCATATTCAAGGGGCATGTTTTTAGTACATTCCGAGTCCGTTGAAAACCCTTACGTTGCAACAAGG CCGTTTAGGGTAAATGCAGGCCCTGTTCATGCGTATATATTATGCCCTGAAAATAAAACTAAATATTTAAGTGATTTAAA AGCCGGAGATAAAGTACTTATTGTTAATAAAGATGGAAAAACAAGGGAAACTGTTATCGGGCGCATAAAAATAGAAAAAA GGCCCCTATTTTTAGTTGAAGCAGAATACAATGGAGAAATATTAAGAACTATTCTTCAAAATGCTGAAACTATAAGACTT GTTTCTGATGAAGGAAAGCCCATTTCAGTTGTTGATTTAAAAGAAGGATTAAAAGTTTTGATAAAACCTGATGAAAATGC TAGGCATTTTGGAATGGCGATAAATGAATCAATTATTGAAAAATAA
Upstream 100 bases:
>100_bases TTTTAATATAATATACCAATAATACATAAAAATATATAGATTAACATATATTAAGTCAGTAAACAAAGGACATATTTAAA ATAAATTCAGTGGTGAATTC
Downstream 100 bases:
>100_bases CATAATATCTAAATATTTAATTTTATAATTAACTAATGGTGTAGCTATGGTCAAAGGTCAGACTGTTTTTGTCCAAAATC CGTTTAAAAAAATTGTTAGA
Product: 3-dehydroquinate synthase
Products: NA
Alternate protein names: DHQ synthase
Number of amino acids: Translated: 361; Mature: 361
Protein sequence:
>361_residues MKFGWIMSSSSDIEERKDTVKDSLESSIPAIIVKKDEISTVRELGSIEIISDSLDADIVLVTKKDDLDILKSAKDSGKKT CVYITIETKEDEIYATKVSRLDFVDYIILEGKDWTIIPLENIIADLFNEDIKIVSLVNNVNDAKAAYEILEKGVDGVVLV PKDINEVKEFSKLIDSMNFENVALDYAVIKKIEPVGSGDRVCIDTCSIMEIGEGMLIGSYSRGMFLVHSESVENPYVATR PFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLIVNKDGKTRETVIGRIKIEKRPLFLVEAEYNGEILRTILQNAETIRL VSDEGKPISVVDLKEGLKVLIKPDENARHFGMAINESIIEK
Sequences:
>Translated_361_residues MKFGWIMSSSSDIEERKDTVKDSLESSIPAIIVKKDEISTVRELGSIEIISDSLDADIVLVTKKDDLDILKSAKDSGKKT CVYITIETKEDEIYATKVSRLDFVDYIILEGKDWTIIPLENIIADLFNEDIKIVSLVNNVNDAKAAYEILEKGVDGVVLV PKDINEVKEFSKLIDSMNFENVALDYAVIKKIEPVGSGDRVCIDTCSIMEIGEGMLIGSYSRGMFLVHSESVENPYVATR PFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLIVNKDGKTRETVIGRIKIEKRPLFLVEAEYNGEILRTILQNAETIRL VSDEGKPISVVDLKEGLKVLIKPDENARHFGMAINESIIEK >Mature_361_residues MKFGWIMSSSSDIEERKDTVKDSLESSIPAIIVKKDEISTVRELGSIEIISDSLDADIVLVTKKDDLDILKSAKDSGKKT CVYITIETKEDEIYATKVSRLDFVDYIILEGKDWTIIPLENIIADLFNEDIKIVSLVNNVNDAKAAYEILEKGVDGVVLV PKDINEVKEFSKLIDSMNFENVALDYAVIKKIEPVGSGDRVCIDTCSIMEIGEGMLIGSYSRGMFLVHSESVENPYVATR PFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLIVNKDGKTRETVIGRIKIEKRPLFLVEAEYNGEILRTILQNAETIRL VSDEGKPISVVDLKEGLKVLIKPDENARHFGMAINESIIEK
Specific function: Catalyzes the oxidative deamination and cyclization of 2-amino-3,7-dideoxy-D-threo-hept-6-ulosonic acid (ADH) to yield 3- dehydroquinate (DHQ), which is fed into the canonical shikimic pathway of aromatic amino acid biosynthesis
COG id: COG1465
COG function: function code E; Predicted alternative 3-dehydroquinate synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the archaeal-type DHQ synthase family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): DHQS_METVS (A6URJ1)
Other databases:
- EMBL: CP000742 - RefSeq: YP_001323725.1 - STRING: A6URJ1 - GeneID: 5325762 - GenomeReviews: CP000742_GR - KEGG: mvn:Mevan_1215 - eggNOG: arNOG05006 - HOGENOM: HBG670179 - OMA: DRVCIDT - ProtClustDB: PRK02290 - HAMAP: MF_01244 - InterPro: IPR002812 - PIRSF: PIRSF006655 - ProDom: PD017907
Pfam domain/function: PF01959 DHQS
EC number: NA
Molecular weight: Translated: 40291; Mature: 40291
Theoretical pI: Translated: 4.61; Mature: 4.61
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFGWIMSSSSDIEERKDTVKDSLESSIPAIIVKKDEISTVRELGSIEIISDSLDADIVL CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEEECCCCCCEEE VTKKDDLDILKSAKDSGKKTCVYITIETKEDEIYATKVSRLDFVDYIILEGKDWTIIPLE EEECCCHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEHHHCCEEEEEEEECCCEEEEEHH NIIADLFNEDIKIVSLVNNVNDAKAAYEILEKGVDGVVLVPKDINEVKEFSKLIDSMNFE HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCC NVALDYAVIKKIEPVGSGDRVCIDTCSIMEIGEGMLIGSYSRGMFLVHSESVENPYVATR CEEEHHHHHHHCCCCCCCCEEEEEEECHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEC PFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLIVNKDGKTRETVIGRIKIEKRPLFLVE CEEECCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCEEEEE AEYNGEILRTILQNAETIRLVSDEGKPISVVDLKEGLKVLIKPDENARHFGMAINESIIE ECCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEHHHHHHC K C >Mature Secondary Structure MKFGWIMSSSSDIEERKDTVKDSLESSIPAIIVKKDEISTVRELGSIEIISDSLDADIVL CCEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHCCCEEEEECCCCCCEEE VTKKDDLDILKSAKDSGKKTCVYITIETKEDEIYATKVSRLDFVDYIILEGKDWTIIPLE EEECCCHHHHHHCCCCCCEEEEEEEEECCCCEEEEEEHHHCCEEEEEEEECCCEEEEEHH NIIADLFNEDIKIVSLVNNVNDAKAAYEILEKGVDGVVLVPKDINEVKEFSKLIDSMNFE HHHHHHHCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCC NVALDYAVIKKIEPVGSGDRVCIDTCSIMEIGEGMLIGSYSRGMFLVHSESVENPYVATR CEEEHHHHHHHCCCCCCCCEEEEEEECHHHCCCCEEEEECCCCEEEEECCCCCCCEEEEC PFRVNAGPVHAYILCPENKTKYLSDLKAGDKVLIVNKDGKTRETVIGRIKIEKRPLFLVE CEEECCCCEEEEEEECCCCHHHHHHHCCCCEEEEECCCCCCCCEEEEEEEEECCCEEEEE AEYNGEILRTILQNAETIRLVSDEGKPISVVDLKEGLKVLIKPDENARHFGMAINESIIE ECCCCHHHHHHHCCCCEEEEECCCCCEEEEEECCCCCEEEECCCCCCCCCCEEHHHHHHC K C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA