| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is 150399870
Identifier: 150399870
GI number: 150399870
Start: 1136450
End: 1136836
Strand: Reverse
Name: 150399870
Synonym: Mevan_1125
Alternate gene names: NA
Gene position: 1136836-1136450 (Counterclockwise)
Preceding gene: 150399871
Following gene: 150399869
Centisome position: 66.09
GC content: 29.46
Gene sequence:
>387_bases ATGAGAATACCTGCAAAGAGAATTCCCATATCCAAACTAAAAGAAGGAACATTTGTTGAAGCAAAAGGCCAATGGGATTC AAACTACGTTGTTACAAAAGACGATGAAAGTGTTTCAAGAATTTTATTATATGGAATAATTATATCAAAATATTTAAACG TTGCAAAGGAGTTCTGCTCTATTACATTAGATGATTTAACTGATGACATACGAATTTCAGGATTTAAAGGAATGGCAAAA ACTCTTCAAGTGTTTGAAAAAGGCGACACTATTTTAGTCGTTGGAAGGATTAAAAAAGATTTAAAAGACAGTATATATAT ATTTCCGGAAGTTGTAAAAAAAGTTGAACCTGAAATGTACCTTTTAAATGTTTTTGAAAATTATTAG
Upstream 100 bases:
>100_bases TATTCAATTAAAAAATTCAAACCCTAAATTAATCGCAAAATTTATAGAAAAAATCGAAAAATACAACTAATACCATTTAA AGAATACGTTGGTGTAAATA
Downstream 100 bases:
>100_bases TGGGATATTTTGGATTTTGAGTATATTTATCTTGAAGAAATAGATTCCACAAATAAATTTGCATATGATCTTGGAAAACA GTGTAAAAGAAATTTAGTGA
Product: tRNA/helicase-type nucleic acid-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 128; Mature: 128
Protein sequence:
>128_residues MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCSITLDDLTDDIRISGFKGMAK TLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMYLLNVFENY
Sequences:
>Translated_128_residues MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCSITLDDLTDDIRISGFKGMAK TLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMYLLNVFENY >Mature_128_residues MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCSITLDDLTDDIRISGFKGMAK TLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMYLLNVFENY
Specific function: Unknown
COG id: COG3390
COG function: function code S; Uncharacterized protein conserved in archaea
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14686; Mature: 14686
Theoretical pI: Translated: 8.40; Mature: 8.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCS CCCCCCCCCHHHCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC ITLDDLTDDIRISGFKGMAKTLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMY EEHHHCCCCEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHEEECHHHHHHCCCHHE LLNVFENY EHHHHHCC >Mature Secondary Structure MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCS CCCCCCCCCHHHCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC ITLDDLTDDIRISGFKGMAKTLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMY EEHHHCCCCEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHEEECHHHHHHCCCHHE LLNVFENY EHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA