Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399870

Identifier: 150399870

GI number: 150399870

Start: 1136450

End: 1136836

Strand: Reverse

Name: 150399870

Synonym: Mevan_1125

Alternate gene names: NA

Gene position: 1136836-1136450 (Counterclockwise)

Preceding gene: 150399871

Following gene: 150399869

Centisome position: 66.09

GC content: 29.46

Gene sequence:

>387_bases
ATGAGAATACCTGCAAAGAGAATTCCCATATCCAAACTAAAAGAAGGAACATTTGTTGAAGCAAAAGGCCAATGGGATTC
AAACTACGTTGTTACAAAAGACGATGAAAGTGTTTCAAGAATTTTATTATATGGAATAATTATATCAAAATATTTAAACG
TTGCAAAGGAGTTCTGCTCTATTACATTAGATGATTTAACTGATGACATACGAATTTCAGGATTTAAAGGAATGGCAAAA
ACTCTTCAAGTGTTTGAAAAAGGCGACACTATTTTAGTCGTTGGAAGGATTAAAAAAGATTTAAAAGACAGTATATATAT
ATTTCCGGAAGTTGTAAAAAAAGTTGAACCTGAAATGTACCTTTTAAATGTTTTTGAAAATTATTAG

Upstream 100 bases:

>100_bases
TATTCAATTAAAAAATTCAAACCCTAAATTAATCGCAAAATTTATAGAAAAAATCGAAAAATACAACTAATACCATTTAA
AGAATACGTTGGTGTAAATA

Downstream 100 bases:

>100_bases
TGGGATATTTTGGATTTTGAGTATATTTATCTTGAAGAAATAGATTCCACAAATAAATTTGCATATGATCTTGGAAAACA
GTGTAAAAGAAATTTAGTGA

Product: tRNA/helicase-type nucleic acid-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 128; Mature: 128

Protein sequence:

>128_residues
MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCSITLDDLTDDIRISGFKGMAK
TLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMYLLNVFENY

Sequences:

>Translated_128_residues
MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCSITLDDLTDDIRISGFKGMAK
TLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMYLLNVFENY
>Mature_128_residues
MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCSITLDDLTDDIRISGFKGMAK
TLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMYLLNVFENY

Specific function: Unknown

COG id: COG3390

COG function: function code S; Uncharacterized protein conserved in archaea

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14686; Mature: 14686

Theoretical pI: Translated: 8.40; Mature: 8.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCS
CCCCCCCCCHHHCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
ITLDDLTDDIRISGFKGMAKTLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMY
EEHHHCCCCEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHEEECHHHHHHCCCHHE
LLNVFENY
EHHHHHCC
>Mature Secondary Structure
MRIPAKRIPISKLKEGTFVEAKGQWDSNYVVTKDDESVSRILLYGIIISKYLNVAKEFCS
CCCCCCCCCHHHCCCCCEEEECCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHC
ITLDDLTDDIRISGFKGMAKTLQVFEKGDTILVVGRIKKDLKDSIYIFPEVVKKVEPEMY
EEHHHCCCCEEECCCHHHHHHHHHHHCCCEEEEEHHHHHHHHHHEEECHHHHHHCCCHHE
LLNVFENY
EHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA