| Definition | Methanococcus vannielii SB chromosome, complete genome. |
|---|---|
| Accession | NC_009634 |
| Length | 1,720,048 |
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The map label for this gene is lysN [H]
Identifier: 150399853
GI number: 150399853
Start: 1121542
End: 1122729
Strand: Reverse
Name: lysN [H]
Synonym: Mevan_1108
Alternate gene names: 150399853
Gene position: 1122729-1121542 (Counterclockwise)
Preceding gene: 150399855
Following gene: 150399851
Centisome position: 65.27
GC content: 31.48
Gene sequence:
>1188_bases ATGAATGTAAAGTTTTCAAATAGAATGGAAAAGTTAAAAACATCAGAAATAAGAGAAATATTAAAAGTTACACAGAATCC TGAAGTAATTTCTTTTGCAGGCGGACTTCCCGCACCAGAATTATTTCCGGTTCATGAAATAAAAAAGATTTCTTCGCTAG TTTTAGATGAAATGGGCCCAGAATCATTACAGTACGATTTAACTGAAGGGTATGTTCCCCTTAGAAAGCAGATTTCCGAA AGAATGAATAGAGTATATAAAACAGAGCTTTCAGAAAAAAACATTTTAATCGTTTGCGGTTCCCAACAAGGCCTTGATTT CTCCGGAAAAGTATTTATTGATAAAGGAGATGTTATATTATGCGAAAGTCCAACATATTTGGGCGCAATTAATGCATTTA AAGCATATGAACCTGAATTTATTGAAGTTCCAACCGATGACTTTGGAATGATTCCAGAAGAACTTGAAAAAATATTAAAT CAGAGACATGATGTAAAAATGATTTACGTAATTCCAGATTTTCAAAATCCTACTGGTAAAACATGGTCTTTTGAAAGAAG AAAAAAATTCATGGAAGTTATTGAAAAATATAAAATTCCAGTAATTGAGGATAATCCTTACGGAGAACTAAGGTTTTCAG GTGAAATTCTTCCTTCATTAAAATCTCTCGATAATTTAGGACTTGTGGTTCATCTTGGAACTTTTTCAAAAACGTTCTGC CCCGGTTTAAGGGTTGGTTGGATTTGTGCATCTGAACATATCCTTGAAAAATATATTTTAATAAAACAGGGTGCAGATTT ACACACTTCTTCGTTTTCCCAGCGAATAATTTCAAAAATGCTTGAAAATTACGATTTCGAAGAAAGACTATCAAAATTAA AAGAACTTTATAAAAAAAGAAGAGATTTAATGATTTTTGAAATGAAAAAAAAATTCCCTAAAAATTTAAAATACACAAAT CCTGATGGGGGCCTTTTTACATGGGTTGAACTTCCAGAAGGGTTTGATGGAAGGAAATTTTTAGAAGAATGTCTAAAAAA TAATGTTGCAATTGTTCCAGGAGGTTCATTTTTCCCAAACGGAGGCCATGAAAATACGTTTAGGTTAAATTATTCAAACA TGTCTGAAGAAAAAATAATTGAAGGGATAAACCGGCTTTCAAAGGTTTTGAATGAATTTGAATATTAA
Upstream 100 bases:
>100_bases AGATATTTTTAATAATTCTCTAAACCGTATATCGTATATATGTACGGTATATATACTTAGCATATATCATTATCAATCTT AACAAAATTGGGGCATTAAA
Downstream 100 bases:
>100_bases ATATTTTCTAATTAAATATTTTCAGCCCTATTTCATAAATTTTTATTTTACCCAAGAATCAAGTGTTACTTTTGGATGAA ACCACTTAACTGTCGGCATG
Product: GntR family transcriptional regulator
Products: NA
Alternate protein names: 2-aminoadipate aminotransferase; Alpha-aminoadipate aminotransferase; AAA-AT; AadAT [H]
Number of amino acids: Translated: 395; Mature: 395
Protein sequence:
>395_residues MNVKFSNRMEKLKTSEIREILKVTQNPEVISFAGGLPAPELFPVHEIKKISSLVLDEMGPESLQYDLTEGYVPLRKQISE RMNRVYKTELSEKNILIVCGSQQGLDFSGKVFIDKGDVILCESPTYLGAINAFKAYEPEFIEVPTDDFGMIPEELEKILN QRHDVKMIYVIPDFQNPTGKTWSFERRKKFMEVIEKYKIPVIEDNPYGELRFSGEILPSLKSLDNLGLVVHLGTFSKTFC PGLRVGWICASEHILEKYILIKQGADLHTSSFSQRIISKMLENYDFEERLSKLKELYKKRRDLMIFEMKKKFPKNLKYTN PDGGLFTWVELPEGFDGRKFLEECLKNNVAIVPGGSFFPNGGHENTFRLNYSNMSEEKIIEGINRLSKVLNEFEY
Sequences:
>Translated_395_residues MNVKFSNRMEKLKTSEIREILKVTQNPEVISFAGGLPAPELFPVHEIKKISSLVLDEMGPESLQYDLTEGYVPLRKQISE RMNRVYKTELSEKNILIVCGSQQGLDFSGKVFIDKGDVILCESPTYLGAINAFKAYEPEFIEVPTDDFGMIPEELEKILN QRHDVKMIYVIPDFQNPTGKTWSFERRKKFMEVIEKYKIPVIEDNPYGELRFSGEILPSLKSLDNLGLVVHLGTFSKTFC PGLRVGWICASEHILEKYILIKQGADLHTSSFSQRIISKMLENYDFEERLSKLKELYKKRRDLMIFEMKKKFPKNLKYTN PDGGLFTWVELPEGFDGRKFLEECLKNNVAIVPGGSFFPNGGHENTFRLNYSNMSEEKIIEGINRLSKVLNEFEY >Mature_395_residues MNVKFSNRMEKLKTSEIREILKVTQNPEVISFAGGLPAPELFPVHEIKKISSLVLDEMGPESLQYDLTEGYVPLRKQISE RMNRVYKTELSEKNILIVCGSQQGLDFSGKVFIDKGDVILCESPTYLGAINAFKAYEPEFIEVPTDDFGMIPEELEKILN QRHDVKMIYVIPDFQNPTGKTWSFERRKKFMEVIEKYKIPVIEDNPYGELRFSGEILPSLKSLDNLGLVVHLGTFSKTFC PGLRVGWICASEHILEKYILIKQGADLHTSSFSQRIISKMLENYDFEERLSKLKELYKKRRDLMIFEMKKKFPKNLKYTN PDGGLFTWVELPEGFDGRKFLEECLKNNVAIVPGGSFFPNGGHENTFRLNYSNMSEEKIIEGINRLSKVLNEFEY
Specific function: Catalyzes the transfer of an amino group between 2- oxoadipate (2-OA) and glutamate (Glu) to yield alpha-aminodipate (AAA). It can also transaminate glutamate, leucine, and aromatic amino acids. It also conbtributes in the biosynthesis of other amino acid
COG id: COG1167
COG function: function code KE; Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family [H]
Homologues:
Organism=Homo sapiens, GI7705897, Length=407, Percent_Identity=27.7641277641278, Blast_Score=171, Evalue=1e-42, Organism=Homo sapiens, GI33469970, Length=407, Percent_Identity=27.7641277641278, Blast_Score=171, Evalue=1e-42, Organism=Escherichia coli, GI1787710, Length=377, Percent_Identity=27.3209549071618, Blast_Score=169, Evalue=3e-43, Organism=Escherichia coli, GI1790797, Length=386, Percent_Identity=24.0932642487047, Blast_Score=141, Evalue=7e-35, Organism=Escherichia coli, GI1788722, Length=366, Percent_Identity=22.6775956284153, Blast_Score=86, Evalue=3e-18, Organism=Escherichia coli, GI48994949, Length=389, Percent_Identity=23.6503856041131, Blast_Score=71, Evalue=1e-13, Organism=Saccharomyces cerevisiae, GI6321236, Length=482, Percent_Identity=24.896265560166, Blast_Score=135, Evalue=1e-32, Organism=Saccharomyces cerevisiae, GI6321000, Length=246, Percent_Identity=28.8617886178862, Blast_Score=94, Evalue=5e-20, Organism=Drosophila melanogaster, GI21356535, Length=403, Percent_Identity=25.3101736972705, Blast_Score=127, Evalue=1e-29,
Paralogues:
None
Copy number: 10-20 Molecules/Cell [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004839 - InterPro: IPR015424 - InterPro: IPR015421 - InterPro: IPR015422 [H]
Pfam domain/function: PF00155 Aminotran_1_2 [H]
EC number: =2.6.1.39 [H]
Molecular weight: Translated: 45577; Mature: 45577
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNVKFSNRMEKLKTSEIREILKVTQNPEVISFAGGLPAPELFPVHEIKKISSLVLDEMGP CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC ESLQYDLTEGYVPLRKQISERMNRVYKTELSEKNILIVCGSQQGLDFSGKVFIDKGDVIL HHHEECHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEEE CESPTYLGAINAFKAYEPEFIEVPTDDFGMIPEELEKILNQRHDVKMIYVIPDFQNPTGK ECCCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCC TWSFERRKKFMEVIEKYKIPVIEDNPYGELRFSGEILPSLKSLDNLGLVVHLGTFSKTFC CCCHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCHHHHHHHHCCCEEEEEECCCCHHHC PGLRVGWICASEHILEKYILIKQGADLHTSSFSQRIISKMLENYDFEERLSKLKELYKKR CCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RDLMIFEMKKKFPKNLKYTNPDGGLFTWVELPEGFDGRKFLEECLKNNVAIVPGGSFFPN HCEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCC GGHENTFRLNYSNMSEEKIIEGINRLSKVLNEFEY CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNVKFSNRMEKLKTSEIREILKVTQNPEVISFAGGLPAPELFPVHEIKKISSLVLDEMGP CCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCC ESLQYDLTEGYVPLRKQISERMNRVYKTELSEKNILIVCGSQQGLDFSGKVFIDKGDVIL HHHEECHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCEEEEECCCEEE CESPTYLGAINAFKAYEPEFIEVPTDDFGMIPEELEKILNQRHDVKMIYVIPDFQNPTGK ECCCCHHHHHHHHHCCCCCEEECCCCCCCCCHHHHHHHHCCCCCEEEEEEEECCCCCCCC TWSFERRKKFMEVIEKYKIPVIEDNPYGELRFSGEILPSLKSLDNLGLVVHLGTFSKTFC CCCHHHHHHHHHHHHHHCCCEECCCCCCCEEECCCHHHHHHHHCCCEEEEEECCCCHHHC PGLRVGWICASEHILEKYILIKQGADLHTSSFSQRIISKMLENYDFEERLSKLKELYKKR CCCEEEEEEHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH RDLMIFEMKKKFPKNLKYTNPDGGLFTWVELPEGFDGRKFLEECLKNNVAIVPGGSFFPN HCEEEEHHHHHCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCEEEEECCCCCCC GGHENTFRLNYSNMSEEKIIEGINRLSKVLNEFEY CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA