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The map label for this gene is 150399834

Identifier: 150399834

GI number: 150399834

Start: 1102424

End: 1102633

Strand: Reverse

Name: 150399834

Synonym: Mevan_1089

Alternate gene names: NA

Gene position: 1102633-1102424 (Counterclockwise)

Preceding gene: 150399841

Following gene: 150399833

Centisome position: 64.1

GC content: 34.76

Gene sequence:

>210_bases
ATGGCTTTCGGTAAACCCCAAATGAAAAAAGTTCCTGTAGAAACAGGAAAAGAATACGAAATTTTAATTGAGGACATGGG
TAAAGGTGGAGACGGTATCGCTAGAATAGACGGTTTCGTTGTATTCGTACCTAATGCAGAAAAAGGAACAAAAGTAAAAG
TAAAAGTTACCGCTGTAAAAGAAAAATTCGCTTTTGCAGAAAAAATTTAA

Upstream 100 bases:

>100_bases
CTAAAAAATGAACAGTATACTCTCAGATACTTATTTATACTACTAAAAGAAGTGTACTATTGCATCAAATATAGATGTAT
ATAATACTAGGTGAATAAAT

Downstream 100 bases:

>100_bases
GTGATGAATCGTCTTCTCTGATACCTGGGGCTTTATCGAAATCCTCAGCAGTTAAGCAGTGATTTAGATGATAGAATCAC
TAATCCACTTCTTTTACTTT

Product: deoxyribonuclease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 69; Mature: 68

Protein sequence:

>69_residues
MAFGKPQMKKVPVETGKEYEILIEDMGKGGDGIARIDGFVVFVPNAEKGTKVKVKVTAVKEKFAFAEKI

Sequences:

>Translated_69_residues
MAFGKPQMKKVPVETGKEYEILIEDMGKGGDGIARIDGFVVFVPNAEKGTKVKVKVTAVKEKFAFAEKI
>Mature_68_residues
AFGKPQMKKVPVETGKEYEILIEDMGKGGDGIARIDGFVVFVPNAEKGTKVKVKVTAVKEKFAFAEKI

Specific function: Unknown

COG id: COG3269

COG function: function code R; Predicted RNA-binding protein, contains TRAM domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR002792 [H]

Pfam domain/function: PF01938 TRAM [H]

EC number: NA

Molecular weight: Translated: 7545; Mature: 7414

Theoretical pI: Translated: 9.99; Mature: 9.99

Prosite motif: PS50926 TRAM

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFGKPQMKKVPVETGKEYEILIEDMGKGGDGIARIDGFVVFVPNAEKGTKVKVKVTAVK
CCCCCCCCEECCCCCCCCEEEEEEECCCCCCCEEEECEEEEEEECCCCCCEEEEEEEEEC
EKFAFAEKI
CHHHHHCCC
>Mature Secondary Structure 
AFGKPQMKKVPVETGKEYEILIEDMGKGGDGIARIDGFVVFVPNAEKGTKVKVKVTAVK
CCCCCCCEECCCCCCCCEEEEEEECCCCCCCEEEECEEEEEEECCCCCCEEEEEEEEEC
EKFAFAEKI
CHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]