Definition Methanococcus vannielii SB chromosome, complete genome.
Accession NC_009634
Length 1,720,048

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The map label for this gene is 150399812

Identifier: 150399812

GI number: 150399812

Start: 1083919

End: 1084830

Strand: Reverse

Name: 150399812

Synonym: Mevan_1067

Alternate gene names: NA

Gene position: 1084830-1083919 (Counterclockwise)

Preceding gene: 150399813

Following gene: 150399807

Centisome position: 63.07

GC content: 31.36

Gene sequence:

>912_bases
ATGGAGCTAACAGTTGTTCAAAAAGAAATATTGCAGGAATTACTCCAAATATATAAAGAAAAAAATAAGGCTGTTAAAGG
AACTGAAATTGCCGTTAGATTAAGTAGAAATCCTGGAACTATTAGAAACCAGATGCAAGCTTTAAGGGCTTTAAACCTCG
TAGATGGAGTTCCCGGGCCAAAGGGCGGATACATTCCCACAAGCCAAACTTATAGGTCATTAGGGCTCGAAATTAAGGAA
GAAATTGTTGTTCCAATTTATAAGGGTGAAGAAAGAATTGAAGGAGTAAATGTTACTAAAATTGTCTTTGATACCGTAAC
TCATGAAAGGTCATGTTCTTCAAAGATATATATTGCAGGAGACACAAGAAAATTTTCTGAAAACGATATTGTAAAAATTG
GGCCAACTCACCACAATAAAATTGTAATACTTGGAAAAGTTGTTGGACGGGATGATATTAACCATATTTTACTTATAGAC
GTAATTGGCGTTGCAAGTGTCCCATATATTTCTGTATCAGAAGTTGGAACTAAAGATGAATTGATAAGTATTAGACCCGA
TGAAACAGTTAAAAACACTGCAAAAGTGCTATCTGAAAAAAATATTAGTGGAATTCCAATAATGGAAGATAAAAAACTTT
TAGGAATAATAAGTCTTCATGATATTGCTGACGCAGTTTCAAAAGGTCTTGAAAACGAAAAAGTATCTAAAATCATGGCC
ACAAATACATTCACAATCTCGAAAGATAAAAAAATATACGATGCGCTTATTTTAATGGAAAAAAATAACGTTGGAAGGTT
AATTATTGTAAATGAATATGAAGATACCGTTGGAATTATTACAAGAACAGATATTTTAAAATTAATTGAAGGAACAATAT
TTCCAAAAATATTAAAAGGCTATTTAAAATAA

Upstream 100 bases:

>100_bases
TTTCGATGTTAAACCAAAAGATTATTATATATCTAAAAAATCATAGTATATATGTCACTATTTATAATCACTATTTATAA
TCATTGATAATGGTGGGGCT

Downstream 100 bases:

>100_bases
AAAAGAGTTATTTCATTCTTTTTTTAAATTCTTCGTTTAATTCTTCATAAGAAATTCCGAATTTTGCAAGTAAGACAAAC
GTGTGAAAAATTAAATCTGC

Product: signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGPKGGYIPTSQTYRSLGLEIKE
EIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAGDTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLID
VIGVASVPYISVSEVGTKDELISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA
TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKGYLK

Sequences:

>Translated_303_residues
MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGPKGGYIPTSQTYRSLGLEIKE
EIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAGDTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLID
VIGVASVPYISVSEVGTKDELISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA
TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKGYLK
>Mature_303_residues
MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGPKGGYIPTSQTYRSLGLEIKE
EIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAGDTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLID
VIGVASVPYISVSEVGTKDELISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA
TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKGYLK

Specific function: Unknown

COG id: COG2524

COG function: function code K; Predicted transcriptional regulator, contains C-terminal CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR001807
- InterPro:   IPR000644
- InterPro:   IPR016436
- InterPro:   IPR005104
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00571 CBS; PF03444 DUF293 [H]

EC number: NA

Molecular weight: Translated: 33657; Mature: 33657

Theoretical pI: Translated: 9.11; Mature: 9.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
KGGYIPTSQTYRSLGLEIKEEIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAG
CCCCCCCHHHHHHHCCEEECEEEEEEECCHHHHCCCCEEHEEEEHHHCCCCCCCEEEEEE
DTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLIDVIGVASVPYISVSEVGTKDE
CCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEHHHCCCCEEEHHCCCCCCC
LISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA
EEEECCCHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHC
TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKG
CCEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH
YLK
HCC
>Mature Secondary Structure
MELTVVQKEILQELLQIYKEKNKAVKGTEIAVRLSRNPGTIRNQMQALRALNLVDGVPGP
CCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCC
KGGYIPTSQTYRSLGLEIKEEIVVPIYKGEERIEGVNVTKIVFDTVTHERSCSSKIYIAG
CCCCCCCHHHHHHHCCEEECEEEEEEECCHHHHCCCCEEHEEEEHHHCCCCCCCEEEEEE
DTRKFSENDIVKIGPTHHNKIVILGKVVGRDDINHILLIDVIGVASVPYISVSEVGTKDE
CCCCCCCCCEEEECCCCCCEEEEEEEEECCCCCCEEEEEEEHHHCCCCEEEHHCCCCCCC
LISIRPDETVKNTAKVLSEKNISGIPIMEDKKLLGIISLHDIADAVSKGLENEKVSKIMA
EEEECCCHHHHHHHHHHHCCCCCCCCEECCCCEEEEEEHHHHHHHHHCCCCHHHHHHHHC
TNTFTISKDKKIYDALILMEKNNVGRLIIVNEYEDTVGIITRTDILKLIEGTIFPKILKG
CCEEEECCCCEEEEEEEEEECCCCCEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHH
YLK
HCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]